Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------DAG2                              <----------DOF2                        --------->DEAR3(1)                        --------->AtMYB61                                <---------WOX13(1)                        <---------ALFIN1                               --------->ATHB12                       --------->MYB46(3)                  <---------ANAC46                     <---------ALFIN1                      <---------ANAC58                   ------>ZmHOX2a(1)                       <---------AtLEC2     --------->LBD16               --------->ARR14(2)                          <---------ANAC58--------->KAN4(2)          <-----------GT1  <---------ALFIN1               <---------MYB46(3)    ------>ZmHOX2a(1)      --------------------->WRI1                        <---------MYB52(1)<---------MYB46(3)  -------      <----------DOF2--------->ANAC46         --------->AtLEC2        <---------YAB1         --------   agtctcggctttaaacgattcctccaccaccactttctcttcatcgtcttgcaaaatcgttgcttggactcgatgattgttcctgaagttttcaaaaaag  11772100                                                                    ------->MYC3                                                                    <-------MYC3                                                                    <-------MYC2                                                                    ------->MYC2                                                                   <---------ANAC46                                                                   <---------ANAC55(2)                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                   --------->ANAC55(2)                                                                   <---------TGA1a                                                                   <---------O2                                                                   --------->O2                                                                   --------->TGA1a                                                              <---------ICU4                                       ----------->GT1        --------->YAB1                                     <-------TEIL          --------->YAB1           <---------AHL20(2)                                 <---------------AtSPL8<----------DOF2              --------->AHL20(2)                         --------->ANAC46              ======================bZIP_DOF                         --------->ANAC58              ------>ZmHOX2a(1)         --------->WOX13(1)<-                         --------->ANAC58          <---------ARR14(2)          <---------ATHB12<----- -->DAG2 --------->At4g35610    ---------->DOF2    --------->ARR14(2)   --------->ZAT18      -------- -->DOF2 <---------At4g35610    =============================================bZIP_DOF<---------AHL20(2)   ttccaattttcagcaaactagaaatggacgaaacaaaagtacagcaaaattcaaatccttttcataatcacgtgtgaacaaatcaattaaatattagctg  11772200                                                                                  --------->At4g35610                                                                                  <------NtERF2                                                                                 <---------ATERF1(1)                                                                                 <---------RAP2.3(1)                                                                                 <---------RRTF1(1)                                                                                 <---------ERF1                                                                                 <---------DEAR3(2)                                                                                <---------RRTF1(3)                                                                                <---------RAP2.3(2)                                                                                <---------RAP2.6(2)                                                                                <---------RAP2.3(3)                                                                                <---------DEAR3(1)                                                                        --------->ANAC58                                                                        --------->ANAC46                                                                        --------->ANAC58          --------->TOE1(3)                                            --------->SPL7          --------->TOE2(3)                                          <---------SPL7       --------->ANAC58                                            <---------------AtSPL3       --------->ANAC58                          --------->ANAC58  --------------->AtSPL3       <---------ALFIN1                          --------->ANAC58 <---------At4g35610 --------->HSFB2a(2) --------STY1(2)                              <---------REM1(1)   --------->At4g35610 <---------HSFB2a(2) ----REM1(1)        --------->At4g35610  <---------At4g35610    <------ZmHOX2a(1)------>NtERF2 ->At4g35610     --------->At4g35610  <------ZmHOX2a(1)  <-----------HVH21 --------->MYB52(1)   tagctaggcacaccttaatagcagacgacgagaagagagaggaagatgatgaagcaatcggtgagaggagctgtacgaaacggcggctctagagcgtcga  11772300                                                                <---------MYB52(1)                                                               <-----------TGA1                                                        <---------ALFIN1                                                      ------>NtERF2                                                      <---------ATERF1(1)                                                     --------->RAP2.3(3)                                                     --------->DREB2C(2)                                                     --------->RAP2.3(2)                                                     --------->DEAR3(1)                                                     --------->RAP2.6(2)                       <---------WRKY45              --------->ANAC46                       <---------WRKY38(1)           --------->RRTF1(3)                       <---------WRKY12              <---------ATERF1(2)              ----------->HVH21                      --------->ATERF1(2)             --------->At5g28300      <---------GLK1(1)<------NtERF2            <---------ANAC58        <------ZmHOX2a(1)--------->RRTF1(2)            --------->At4g35610            <---------ANAC58 ------->TEIL           --------->ERF1  <------ZmHOX2a(1)----------->GT1            <---------ANAC46 --------->MYB52(1)     --------->ORA47(2)       --------->ARR11(1)            ----------->GT1<---------SPL7           --------->RAP2.3(1) --------->TOE1(2)           <-----------------------TaNAC69(2)      <---------ATERF1(1) --------->MYB46(3)      --------->MYB52(1)<---------DOF5.7(2)   ---------->DOF2  <-----------HVH21   <---------At4g35610      ---------->DOF2--------->TOE2(3)--------->At4g35610     --------->ANAC46--------->CCA1(2)     -    --------->MYB46(3)--------->DOF5.7(2)<-----------------------TaNAC69(2)  <---------ARR11(3)    <-   agagtaaccaaaggccgtgaaatcgtcaacgtaccagaggagatgcctgaaatcgccgccatctccgtcaggaaccaaagatttgagcagataatttcac  11772400                                                             >>>>>>>>>TBF1                                                       <---------HSFB2a(2)              <---------GLK1(2)           ---------->DOF2                       --------->LBD16                        <---------ARR14(2)       ----------->GT1                          <---------ANAC58        ------->TEIL    --------->ARR14(2)      --------->DAG2                            <---------ANAC46        --------->ARR14(2)     ---------->DOF2                ----------->GT1    --------->HSFB2a(2)          <---------At4g35610 --------->DOF2     <---------CCA1(1)           <---------ANAC58        <---------ARR14(2) -----ZmHOX2a(1)    <---------RVE1(1)          <---------LBD16    ----------->TGA1  --------->At4g35610   aggaaagaaaagtaaaagttggatatttttggtagaaatggagaaattttgcgggttttagaagaagaatgacgaatcccaatgtgagcggattctccac  11772500                                                                 --------->MYB59                                                 --------->HSFB2a(1)  ------>ZmHOX2a(2)                                                 --------->HSFC1(2)  <------ZmHOX2a(2)                                            <------NtERF2----------------->AGL3                                           --------->LBD16--------------->AGL15                                           <------NtERF2 ----------------->AGL2                                           ----------->GT1<---------------AGL15                                       --------->DEAR3(1)<-----------------AGL3                               --------->MYB46(3)<---------HSFB2a(1)<---------ARR14(2)         ------                           --------->SPL7<---------LBD16-------->P <------ZmHOX2a(1)         <-------                       ------>NtERF2  --------->ANAC58  ------>MYB46(1)                  ----------->HVH21                   <---------DEAR3(1) --------->ANAC58 ======================HOX2a_HOX2a <---------ETT(1)                   --------->DEAR3(1)<---------At5g28300------>MYB83--------->ARR14(2)  ------>ZmHOX2a(2)                 <-----------HVH21  --------->MYB52(1) ------>ZmHOX2a(1)            <---------ATHB12                <---------O2 ----------->RAV1(1) <---------HSFC1(2)============================HOX2a_HOX2a                --------->O2*TSS   <---------ATHB12    =====================HOX2a_HOX2a --------->DEAR3(2)   tacttctcatccccatcgacgtcgacgcgtccaacaaatcacggccggagaaatttcctaccaaaattaggatccgattaagtcaaatgatccgacccgg  11772600     <------------CBF   <---------ANAC58              <------NtERF2                            <-----    --------->ATHB12    <---------ANAC58              --------->ATERF1(1)                  --------->At4g35610 --->LBD16         --------->YAB1                    <---------RAP2.3(1)                   <---------At4g35610 --LBD16        --------->YAB1     ---------->DOF2   ------>NtERF2              --------->AHL20(2)<--   gttaacttattgggcttagaataatagcttatgtgctaaaaggccctgaacatggcgccatcttgtatgaaatagttcgaaattaaaactatcaactgat  11772700                                                                      --------->O2                                                                      <---------O2                                                                      <---------TGA1a                                                                      <---------ANAC58                                                                      <---------bZIP60(2)                                                                      <---------ANAC58                                                                      <---------ANAC46                                                                      <---------ANAC55(1)                                                                   <---------ATHB12                                                                   ----------->TGA1                                                         --------->LBD16                            <                                                        <---------ANAC55(2)                         <                                          <---------WOX13(1)       ----------->HVH21           ------       --------->LBD16                  --------->ATHB12<---------ANAC46                       ------      ----------->GT1         <---------ANAC46          ----------->GT1  --------->REM1(2)    <------ ----GLK1(2)                  <---------ANAC58         <---------LBD16<---------ANAC55(2)     ------- ---------GT1                 <---------ANAC58    <---------AHL20(2) ----------->STF1     --------->AHL20(2)   tttctagcccgtgaaaattgctaacatttctgacttggaaactgattgatatataatcccgtgaattcaatgacgtgtatagtttcaaaaaaaaaaatga  11772800    ----------->GT1 ---------YAB1 ---------TOE2(3)          --------->AHL20(1)                  <---------AHL20(2) -->HAHB4                  <---------AHL20(1)                 <---------AHL20(2)                   -- --->ATHB12                <---------AHL20(2)        <---------YAB1         --------->AHL20(2)  ----- ---YAB1                   --------->AHL20(2)     <---------YAB1            <---------AHL20(2)  ----- -->ICU4      --------->AHL20(2)     <---------ARR14(2)       --------->AHL20(2)             --------   ttaagaatgtgaaaaaaaaaatatgacaattaattagcgaattcaactcaatttgattatttgtttaaattgacttatttaaaaaaaaaactcaaaaata  11772900                                                                   ----------->GT1                                                                   <---------ZAT6                                                           --------->ARR11(3)   <---------AHL20(2)                        ------>ZmHOX2a(2)    <---------TOE1(3)  <---------AHL20(2)                       --------->ARR11(3)     <---------TOE2(3)  <---------AHL20(1)                       <---------AGP1  <---------ARR11(3)  --------->AHL20(2)                   <-------GAMYB       <---------AHL20(1)              ---------- ------->YAB1                         <-----------RAV1(1)  --------->AHL20(1)          <---------At4g35610 ------>GT1                      <----------DOF2          <---------AHL20(2)           --------->At4g35610 ---->YAB1                 --------->At4g35610        --------->AHL20(2)        --------->At4g35610 ->YAB1                    <---------At4g35610        <---------AHL20(2)        <---------At4g35610   gtaataaaattttggaaccatactgtatcatctgtcttttctgttgatctggttttttaaatatttttagggttacaaatttagctggaagctcaaagtc  11773000  Previous    Next  AGI:  At4g22260.1    Description:  IM (IMMUTANS). Identical to Alternative oxidase 4, chloroplast/chromoplast precursor (AOX4) [Arabidopsis Thaliana] (GB:Q56X52;GB:O49631;GB:Q9SBA4;GB:Q9ZSQ3); similar to AOX2 (alternative oxidase 2), alternative oxidase [Arabidopsis thaliana] (TAIR:AT5G64210.1); similar to Alternative oxidase [Medicago truncatula] (GB:ABD32645.1) Range:  from: 11769766    to: 11772528    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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