Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->AHL20(2)                                  <---------AHL20(2)                  --------->ANAC58           ----                                 --------->AHL20(2)                   --------->ANAC55(1)      ------                       <---------WOX13(1)                             --------->ANAC46        ------>MYB83           --------->YAB1    <---------ATHB12                  <--------------OsCBT           ------>MYB46(1) ---------->DOF2  --------->TOE2(3)                   ------>ZmHOX2a(1)     --------->YAB1   -------- -GT1     <---------ATHB12   --------->ICU4          --------->TOE2(3)--------->ANAC58       --------   tgagaaagactaatcaaaatccctaattgaaatcatttaatttctctaattcaatcctcaatcgaacaaaacacgaaattagaatataaacataccaaca  11760600                           ---------->DOF2                         ------->GAMYB                         --------->AtMYB61                        --------->MYB46(3)                       --------->ANAC58                       --------->ANAC58                                                       ------- ----->At4g35610     --------->MYB46(3)                <-----------GT1                        <------ --->MYB46(3)      --------->AtMYB61                  --------->WRKY38(1)                --------->REM1(1) ->MYB52(1)<---------MYB46(3)      ---------->DOF2    ----------->HVH21                 <-------TEIL --->RAV1(1)      --------->MYB46(3)--------->DAG2--------->ATHB12           --------->ATHB12 -------   gatgaagaagcgatggctgaaccacaaccaaaagtcttaaagcgagcatcaacgatttgaccagtcttctcatcgaccttgatttgaagcttcatcacat  11760700                                                                     <---------LBD16                             --------->MYB46(3)                      --------->LBD16                          --------->LBD16                           <---------ANAC58                          <---------SPL7   --------->KAN4(2)        <---------ANAC58                ------>ZmHOX2a(1)         --------->KAN4(1)         <---------LBD16          <-------           --------->GLK1(1) --------->DEAR3(2)                    <---------LBD16        -----------           <---------GLK1(1)--------->SPL7<---------KAN4(1)  ------>MYB83                 -----------           <---------At4g35610           <------ZmHOX2a(2)   ------>MYB46(1)       <---------AtMYB61           <---------ZAT2<---------ANAC55(2)               --------->MYB46(3) --------->YAB1 <-------  ---------->DOF2        --------->ANAC55(2)         ---------->DOF2<---------ANAC46<---------MYB46(3) -->ANAC46 --------->At4g35610  ------>MYB46(1)<---------YAB1--------->MYB52(1)    <---------ZAT6 ---bZIP60(1)   ================================HOX2a_HOX2a<---------MYB55(2)<---------TOE2(3) -->bZIP60(1)  --------->TOE1(2)------>MYB83<---------YAB1--------->ANAC46   <---------YAB1<---------TGA2(2)   caccacaagcgggagctcctacgagtcccgtaccaacgttgggatcattcttatcgaaagacccaacgttgcggggattatcgtagtggtcgatgacgtt  11760800                                                    --------->ANAC58                                                    --------->ANAC58                                                <---------ANAC58                                                --------->ANAC58                                                <---------TGA2(1)                                                --------->O2                                                <---------ANAC58                                                <---------ANAC55(2)                                                --------->ANAC55(2)                                                <---------bZIP60(1)                                                --------->ANAC58                                                <---------O2                                                --------->TGA2(1)                                                <---------TGA1a                                                <---------ANAC46                                                --------->bZIP60(1)                                                --------->TGA1a                                              <---------TGA2(2)                                             ----------->HVH21                                             ----------->TGA1                                           --------->O2                --------->ARR14(2)         <---------ANAC58                <---------ARR14(2)         <---------ANAC46      <---------DEAR3(2)                   --------->ANAC55(2)      <------MYB46(1)  --------->MYB46(3)  <---------ANAC58      <------MYB83    ------>MYB46(1)      <---------O2      <---------HSFB2a(1)                  <---------bZIP60(1)      <---------HSFC1(2)------->GAMYB      --------->bZIP60(1)      --------->HSFC1(2)=============================MYC_MYB                  <---------ANAC58     --------->MYB111(1)==================================MYC_MYB             <---------ANAC46     --------->MYB46(2)--------->DEAR3(2)  <---------ANAC55(2)                <---------ANAC58     --------->MYB59 ----------->RAV1(1)   <---------TGA1a               --------->At4g35610     <---------TOE1(2)------>MYB83         --------->TGA1a               <---------ZAT2    =================================================MYC_MYB             --------->ZAT2    <--------P <------ZmHOX2a(1)           <---------bZIP60(2)           <---------At4g35610 --ANAC58    <---------TOE2(2)       --------->ATHB12    <---------STY1(1)<---------ANAC58 >TGA1--------->HSFB2a(1)           <---------YAB1 --------->SPL7       <---------TOE1(2) >HVH21      <---------TOE1(2)   --------->ALFIN1<---------SPL7      --------->ANAC46 --ANAC58<-------TEIL--------->MYB52(1)<---------WOX13(1)--------->STY1(1)<---------ANAC58   ctcatggtaggttcggaggataccaacagaccacggtgttgattgacgtgacgtaagccctagggccttcttcgcagcttgcttgagcatcatcgtgttt  11760900                                                                      <---------TOE2(3)                                                                      <---------TOE1(3)                                                                  <----------DOF2                                                                 <---------------AGL15                   <----------DOF2                               --------------->AGL15         <XXXXX             --------->ANAC58                                    --------->TOE2(3)            <------MYB83             --------->ANAC58                                   ----------------->AG          <------MYB46(1)         <---------HSFB2a(2)        --------->MYB59         <----------DOF2                  --------         <---------ANAC46    <-----------------AG      ------>ZmHOX2a(2)                 <------MYB83         --------->HSFB2a(2) ====================================================MADS_MADS <---------MYB52(1)        <---------LBD16     <---------At4g35610       <------ZmHOX2a(2) *TSS             <---------DEAR3(2)   <---------TOE2(3)        --------->At4g35610--------->CCA1(2)----------------->AGL1   <------MYB46(1)   <---------TOE1(3)        --------->LBD16--------->YAB1   <---------DAG2 <---------MYB46(3)<-------   tttttagggtttcggaagtaacttttgctccgctgattttggtaatgagaaatgagatcggacttttcctttaagggttgtgagaagaagtcggtttggt  11761000                              <---------ORA47(1)                           --------->ALFIN1                          <-------PIF5                          ------->MYC2                          ------->PIF5                          ------->MYC4                          <-------MYC4                          <-------MYC2                          ------->MYC3                         <---------O2                         <---------TGA1a                         --------->TGA1a                         --------->O2                         <---------ANAC55(2)                         ==================================================bZIP_DOF                         <---------ANAC46              <-----------GT1      <----------DOF2                        ------------>OsbHLH66      <---------CCA1(1)      <------------------------ANAC81                    ----------->HVH21              <---------RVE1(1)   <----------DOF2                 --------->ALFIN1        <---------HSFC1(2)     <----------DOF2  <-----------GT1 XXXXXXXXXXXXXXXMIR859---------------->PIF3(2)    --------->ARR11(3) <------------------------ANAC81 ->MYB59 --------->CCA1(2)<-------MYC3   --------->HSFC1(2)     <------------------------ANAC81  <--- --AtMYB61 --------->CCA1(2)--------->WRKY12      <---------ARR11(3)<-----------GT1  <----------DOF2   ttcagacagagagataagcgaggggacacgtggacggtttagatggttctgagatatttgctatttcttttttcttttctttttttcctttgattttttc  11761100                                                                                          ------>ZmHOX2a(1)                                                                                         --------->TOE1(3)                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                            <---------DAG2           --------->GLK1(1)                                                 --------->YAB1               <---------AHL20(2)                                 <----------DOF2<---------YAB1             <---------AHL20(1)         <---------MYB59   <---------MYB59   --------->GLK1(2)             --------->AHL20(1)        --------->At4g35610--------->TOE1(3)--------->ARR11(3)            --------->AHL20(2)        <---------At4g35610--------->TOE2(3)<---------ARR11(3)    <----------DOF2    <---------GLK1(1)   <---------ZAT6   --------->ANAC58      <---------TOE2(3) <----------DOF2<---------AHL20(2) -------DOF2        --------->ANAC58 <<<<<<<<<RAP2.2    --------->WRKY12  --------->YAB1 --------->TOE2(3)   ttttagtattagctaacttgagacgctaacctaaactttagattgagattttgataagttgactttttcttttcaattatatttttgatatccttcaaat  11761200                                                                                            ---------                                                                                           <---------YAB1                                                                                        --------->ICU4                            --------------->AtSPL8                                      <---------YAB1                            --------------->AtSPL3                                    --------->YAB1                            <---------------AtSPL3                           --------->ANAC58                      --------->YAB1          <---------YAB1                 --------->ANAC58                ------>MYB83<---------------AtSPL8                       --------->ANAC58  --------->ICU4                ------>MYB46(1)   <----------DOF2                        --------->ANAC46<---------ICU4            --------->ARR11(3)    <---------DAG2                         --------->ANAC58--------->YAB1            <---------ARR11(3)  <---------TOE1(2)                   <----------DOF2--------->YAB1   gttatagtttataagacctatcgctcataaatcgtacttttcaagtttacaattgaatcggaacatacttcttttacgcaaacaatagtcatgatgattt  11761300                                                                                 <---------ICU4                                                                     <---------ANAC46              <---------ARR11(3)                                    <---------TOE2(3)              --------->ARR11(3)                              <---------AHL20(2)<---------ATHB12            --------->HSFC1(2)                          --------->TOE1(3)     --------->WOX13(1)            <---------HSFB2a(1)                         --------->TOE2(3) ----------->GT1            --------->HSFB2a(1)                      <-----------GT1<---------TOE1(3)            <---------HSFC1(2)                --------->AHL20(2)   <---------DOF5.7(2)    --------->AHL20(2) >ATHB12  ---------->DOF2  --------->ANAC55(2)<---------AHL20(2)--------->TOE2(3)--------->YAB1   agtatgtgtatagaaagttctcaaatttcaagtgatgaaacagtctatttaaaattaaccttaattcattaacgtatagttaatcataacaattaaacct  11761400                                                                                     ----------->GT1                                --------->ARR11(3)      <------ZmHOX2a(1)            --------->YAB1                    <---------YAB1       <---------HSFB2a(2)                      ------>ZmHOX2a(1) <                   --------->TOE2(3)     --------->HSFB2a(2)             --------->ZAT14            <             --------->YAB1     <---------ARR11(3)  <---------ANAC46     <---------ZAT14       <-----   ataagttataggctataacaacattataggcgaatgtcttcgtctagataagttgtgaggagccatctacgactgtgcattgtcctatggtaaacatata  11761500  Previous    Next  AGI:  At4g22220.1    Description:  ISU1 (Iron-sulfur cluster assembly complex protein). similar to ATISU3/ISU3 (IscU-like 3), structural molecule [Arabidopsis thaliana] (TAIR:AT4G04080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66090.1); contains InterPro domain NIF system FeS cluster assembly, NifU, N-terminal; (InterPro:IPR002871); contains InterPro domain ISC system FeS cluster assembly, IscU scaffold; (InterPro:IPR011339) Range:  from: 11759167    to: 11760972    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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