Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ----------->GT1                                                                                  <---------WRKY18(1)                                                                                 --------->WRKY12                                                                                 --------->WRKY38(1)                                                                              --------->ATHB12        <----------DOF2  ---------->DOF2                               --------->HSFB2a(2) -------->YAB1  ------->TEIL                                           <---------HSFB2a(2)         -- ---TOE2(3)  <---------YAB1            <-----------RAV1(1)   ----------->RAV1(2)<---------WOX13(1) -- ->MYB52(1) <---------TOE2(3)        <----------DOF2       <-----------GT1 <---------GLK1(1)     ----   aataaaaattctttaatgaatgtagggaaaagagtatagctttgttgggattactccaacttaacctgattttttggaactcattgacctgaaaaataca  11733900                                                                                               <-----                                                                                             --------          <---------At4g35610                                                                <-------          --------->At4g35610                                             --------->TOE1(2)--------->ZAT14   ---------->DOF2                 <-----------GT1                    <--------ATHB1       <---------ZAT14 ------->ANAC58             ----------->GT1                           <---------ICU4      --------->ALFIN1 ------->ANAC58           --------->YAB1        <----------DOF2  <---------ATHB12     --------->ZAT2< ------>DOF2      --------->MYB52(1)    <----------DOF2    --------->TOE2(3)         --------->ANAC46   aaagccaaagtcagaaggcccaactgtatcatgttatttactctttcagtcttttgttcaacctctaatgaataattctacgaatacaagctgtgttgtg  11734000                                                                         <---------TOE2(3)                                                    <---------HSFB2a(2)  <---------YAB1 ----YAB1    --------->ARR11(3)                     --------->HSFB2a(2)  <---------TOE1(3) --->GT1     <---------ARR11(3)               ------->TEIL    --------->ANAC58 --ANAC46---------->DOF2        ----------->GT1 <----------DOF2   ---------->DOF2              <----- ---------MYB46(3)     ------->TEIL   <----------DOF2         --------->ANAC58    ------>ZmHOX2a(1)   atttgttgaataaaagatgtctacgaatttcagtgagtaacttttatgaactttccagtaagacactcaaaagttatggttctcctaaatccattcactc  11734100                                                       <---------AHL20(2)                                                  --------->AHL20(2)                                                ----------->GT1                                                <---------ANAC55(2)                                              --------->YAB1                                             <---------ATHB12                                           --------->WOX13(1)                                         ------------>CBF <----------ID1         <---------MYB46(3)                                      --------->MYB59 --------->AHL20(2)   <-----------GT1 <---------ANAC46                  <------------CBF   <---------AHL20(2)--------->MYB52(2) ----ATHB12   ---------->DOF2 ---------->DOF2<---------ATHB51           <---------MYB46(3)         --   attcagtgtatgatgcaaaagtttgagaaaaaaaaagaattgggtcaattatgtaaataaatgacaaaaatggtttgttacagttgttgataaatgggct  11734200       <----------ID1      --------->MYB59      <---------TOE2(3)                                                        < <---------YAB1           <-----------GT1            --------->YAB1                             <---- --------->ICU4    <-------TEIL            --------->MYB46(3)  --------->TOE2(3)        <-----------GT1 ------->YAB1---------->DOF2         --------->MYB52(1)  ----------->TBP              <---------WOX13(1)   atcaagattaggccaaaaaggctcatattaacgatgaaaaaacgaacaactaaaatcatataaaaccctagttgtattctatcgtttgatttacaaaacc  11734300                                                                                    ------>ZmHOX2a(2)                                                                                   <------ZmHOX2a(2)                                                                                   <---------GLK1(1)                                                                                   <<<<<<<<<GATA-4                                                                                   <<<<<<<<<GATA-2                                                                                   <<<<<<<<<GATA-3                                                                                  <---------AGP1                                                                                 <---------CCA1(2)                                                                               <---------HSFB2a(2)                                                                               --------->HSFB2a(2)                                                                             ------>ZmHOX2a(1)                                                                             ==============HOX2a_HOX2a                                                                             =============HOX2a_HOX2a                                                                       <---------HSFC1(2)                                                                       --------->ZAT2                                                                       <---------At4g35610                                                                       --------->At4g35610                                                                       --------->HSFC1(2)                                                                       --------->HSFB2a(1)                    ------------>CBF                                 <------NtERF2--------->ARR11(3)         <-----------GT1                              --------->TOE1(3)<---------HSFB2a(1)      --------->GLK1(1)                         --------->TOE1(3)  <---------DEAR3(1)      <---------GLK1(1)                         --------->YAB1     --------->ETT(1)<<<<<<<<<GATA-1 ---------ANAC46    --------->LBD16  --------->AtLEC2 --------->TOE2(3)<---------ZAT2 -----DAG2   <----------DOF2  <------------CBF  --------->TOE2(3)<-----------HVH21<---------ARR11(3)   tttcggagatttctcctttctccccaatactgtattgccatggagaagaaccataaccctaatacatggtcggagcttcctctagatctcttgaacttag  11734400                                                                                           <---------At4g35610                ----------->GT1                                                            --------->At4g35610            <---------At4g35610                                                        <-----------HVH21            <---------ZAT2                       <---------ALFIN1                    --------->SPL7            --------->ZAT2                    --------->ANAC46                       ------->TEIL            --------->At4g35610           <---------MYB52(1)                   --------->ZAT18      <          <-----------RAV1(2)           <---------ANAC55(2)                 <---------ANAC55(2)  <---     --------->ANAC58                <---------ARR14(2)            <---------HSFB2a(2)--------->ANAC58     ------->GAMYB <---------AHL20(2)--------->ARR14(2)            --------->HSFB2a(2)--------->ANAC58     --------->ANAC46           --------->At4g35610      --------->ZAT14    <---------ANAC58  ------>ZmHOX2a(2)     --------->ANAC58         ------->GAMYB--------->SPL7<---------ZAT14    <---------ANAC58 <------ZmHOX2a(2)   ttttcaaacgcctcagcttagttaatttccaacgagctaaatccgtatgctccactcggtactctgtttcgagacaatgcgtgcccgaacgtcagatcgc  11734500                                                                                              ------>ZmHOX2a(2)                                                                                             <------ZmHOX2a(2)                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            <--------                ---------->DOF2                                                             <--------              <---------------AGL15                                                         <--------    <---------GLK1(2)                                                <----------ID1         --------- ---------At4g35610                 --------------->AtSPL3         ---------->DOF2     <-------TEIL<- -------DOF2  --------->LBD16       --------->ZAT6           ------>NtERF2   <----------DOF2---------   tttgctgattctcttccccaaagaagacaacaccgataacagtacttgtaagttgttcaatcccgacgaaaaagacaaactttacaagatgcaagatctt  11734600 -AGP1 -ARR14(2)                                                                                      ----- >ARR11(3)                                                                                      ----- >ARR14(3)                                                                             --------->AHL20(2) ---ARR10                                                     ---------->DOF2          <---------ARR11(3) -ARR14(3)                                       ------>ZmHOX2a(1)                     <---------AHL20(1) -ARR11(3)                                     ----------->RAV1(2)                     <---------AHL20(2) >AGP1                             <---------HSFB2a(2)      <-------TEIL               --------->ARR11(3) --------ANAC46                    --------->HSFB2a(2)     --------->CCA1(2)           --------->AHL20(1) >ARR14(2)          <---------------AtSPL3     <---------At4g35610                <---------YAB1-----   ggtgtggaatttgcaaagagtgtttgtagggcaacttatggaagttggctcctgatgcaagattcaaagtatcatctatacattttgaatatattcactc  11734700                                                                     <------MYB46(1)                                                                   <---------WOX13(1)                      --------->ZAT14               --------------->AtSPL8   <---------DAG2        --------->WOX13(1)                    --------->ATHB12   --------->ATHB12      <------ZmHOX2a(2)                      --------->ICU4     <---------YAB1                    <--      ====================HOX2a_HOX2a        <---------YAB1  --------->ARR14(2)                   <--      =================HOX2a_HOX2a         ---------->DOF2   <---------ARR14(2)        --------->At5g28300    <------ZmHOX2a(1)--------->ALFIN1   ----------->GT1  <-----------------AGL3        <-----------HVH21 ---->ANAC46       ------>ZmHOX2a(1) <---------ANAC58   ------->TEIL <------MYB83<-----------GT1 <--- ---->ANAC58     ----------->RAV1(2) <---------AtLEC2--------->MYB46(3)      <----------DOF2     <--- ---->ANAC58    ------>ZmHOX2a(1)    <---------ANAC58<---------MYB52(2)   <-----------GT1  <---------YAB1   gcaagaggatcaatcttcctcctgtggagtcacaacttggcatggtaaagattgaacgaaccatatatgattggtttcacttttcacacggtcactatag  11734800  Previous    Next  AGI:  At4g22160.1    Description:  unknown protein Range:  from: 11733135    to: 11733818    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g22165.1    Description:  F-box family protein. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G22660.1); similar to At3g03730-like protein [Arabidopsis lyrata] (GB:ABY60296.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 11734340    to: 11735431    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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