Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     >>>>>>>>>RAP2.2                             --------->ANAC46                <----------DOF2                             --------->ANAC58             --------->GLK1(2)           <----------DOF2   --------->ANAC58             --------->ARR14(2)  ----------->GT1          ----------->RAV1(1)            <---------ARR14(2) <---------TOE2(3)         <---------ALFIN1               ------->TEIL -------->DAG2          --------->ANAC46                  <---------ARR11(1) -------->DOF2  <----------ID1     --------->TOE2(3)     <---------CCA1(2)                         -- ---->TOE2(3)   <------ZmHOX2a(1)  --------->YAB1        <---------ARR14(1)                 ---------   ataaaggtgaaaactttaggaacaaaaccccacacaatctaaattccaaaaacaagttcgaatcttttacagagacataaaacaactcagaccataaaat  11719400                             <---------ICU4                                                 ---------                             --------->YAB1                                                 ---------       ------->GAMYB        --------->ICU4                                                  ---------     -------->P             <---------ATHB51 --------->ANAC58                      <---------ANAC46 --------->At4g35610  --------->ANAC46       --------->ANAC58                      --------->ALFIN1 <---------At4g35610<---------ALFIN1       ---------->DOF2                        <------ZmHOX2a(1) ------->ZAT18   --------->ANAC46    <-------TEIL                                 =================== >AHL20(2)     <-----------GT1      --------->GLK1(2)              --------->GLK1(1)     <---------KAN4(2)   gtgagctaaccccaaatttactccaccgaaataatgagattcagagaaagcaagttcagaattagagagaaaccctagagaagaggagtggaataagcca  11719500                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                -----                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                          <---------ALFIN1                      --------->AtLEC2                                                  ----------->RAV1(1)                   <-------TEIL                                                      --------->ANAC55(1)                 <---------ARR14(2)                                                  <---------ANAC55(2)                 --------->ARR14(2)                       <-----------GT1            --------->ANAC55(2)       <------ZmHOX2a(2)             <----------DOF2    <----------DOF2     ----------->GT1------->GAMYB >ANAC46         <---------GLK1(2)   <---------DAG2<-----------GT1<---------ZAT14    --------->ANAC58 >ANAC58      <---------HSFB2a(2) --------->ARR11(3) <-----------GT1    ----------------------->TaNAC69(2) >ANAC58      --------->HSFB2a(2) <---------ARR11(3)---------->ID1--------->ZAT14    --------->ANAC46 =============HOX2a_HOX2a---------->DOF2       <------------------------ANAC81       --------->ANAC58   gtgttttggatcacttccagattcatccaaagctaagaactttttgttttgtttttctctttaccctcttcagtgatttagtaacacacgcaacacacaa  11719600      ----------->GT1     --------->DAG2   ---------->DOF2 ------>ANAC58 ------>ANAC58 -------->GT1                        <---------TOE1(3)    <---------YAB1 ---->MYB52(1)                       <---------TOE2(3) --------->AHL20(2)       <-----------RAV1(1) >ANAC58                    ------->TEIL               <---------AHL20(2)      <---------TOE2(3) >ANAC46                  --------->YAB1           <---------AHL20(2)       --------->ARR11(3) >ANAC58                 <---------ATHB12         --------->AHL20(2)      <---------TOE2(3)   acgaaaaaaggtaaaatttgtaaaccaatgaaactttttaaggtttttgatataaaatttatcaatagaactatttgagataatgttgctatagaaactg  11719700                                                                    --------->ZAT14                                                                    --------->SPL7                                                                  <---------SPL7                                                                <---------------AtSPL3                                                               <---------ARR11(3)                                                              <---------GLK1(1)                                                         <-----------RAV1(2)                                                        <------ZmHOX2a(2)                           <---------YAB1              --------->ARR11(3)                           <---------TOE2(3)          --------->GLK1(1)                      ----------->GT1                 <---------GLK1(1)             --------->ANAC55(2)                    ====================HOX2a_HOX2a             <---------ANAC46                       ===================HOX2a_HOX2a             <---------ANAC55(2)              --------->At5g28300------>ZmHOX2a(2)            <---------LBD16<---------TOE1(3)<---------DEAR3(1)--------->GLK1(1)            <-----------------------TaNAC69(2)<------NtERF2 <------ZmHOX2a(1)--------->ANAC58          <---------ARR14(2)  --------->CCA1(2)     <------ZmHOX2a(1)        --------->ANAC58          --------->ARR14(2) <---------ARR11(3)--------->ALFIN1--------->ARR11(3)     ------------>MYB.PH3(1) --------->ARR11(3)----------->HVH21<------ZmHOX2a(2)    ---------->DOF2   acaagagaagcagttacggacgaagggttaagatttaagagagtaggcggtgaaggagatcaggagatcgtacagtcgcaaggaagaaaaagaagaacga  11719800                <---------YAB1                                                       <---------ICU4       <---------TOE2(3)                                                             -------->HAHB4       <---------TOE1(3)      <-----------GT1    ---------->DOF2       --------->YAB1<--------ATHB1    <XXXXXXXXXXXXXXXXXXXXMIR852      <------------CBF    <---------AHL20(2)         <---------ATHB51    *TSS      <---------AHL20(2)    --------->ATHB12     --------->AHL20(2)         --------->ICU4   <---------At4g35610     --------->YAB1      --------->YAB1       --------->YAB1--------->YAB1   --------->At4g35610     <---------ICU4     <---------YAB1     <---------ICU4  <---------AHL20(2)   <---------ZAT2         <---------YAB1  <---------ANAC58   <---------AHL20(2) <---------AHL20(2)   --------->ZAT2         --------->ICU4  <---------ANAC58  --------->AHL20(2)  --------->AHL20(2)   agacgagctgaggtttttatttttggttattattacgctcattggcttatcaaaagtatttatttaatatttatcatgtttttttaataattcgattttc  11719900                     <------MYB83                  <-------GAMYB                 <---------ANAC46                 <---------ANAC58                                            --------->AHL20(2)                 <---------ANAC58                                        --------->AHL20(2)               <---------ZAT18                                      <---------MYB52(1)          <---------YAB1                                          <---------DEAR3(2)         --------->TOE2(3)                                        <------MYB46(1)       <---------YAB1<---------DEAR3(2)                           <------MYB83               <-------    --------->AHL20(2)                                            <---------MYB46(3)         --------    <---------AHL20(2)    <----------DOF2                        <---------DEAR3(1)         <-------- --------->AHL20(1)  <------MYB46(1)                            <---------ORA47(1)          --------- <---------AHL20(1)  <---------MYB46(3)                 <<<<<<<<<<<<<<<<<LFY <---------AHL20(2) --------->ARR11(3) <---------AtMYB61               ---------->DOF2<-------GAMYB      --------->YAB1 <---------ARR11(3)<---------MYB52(1)        --------->TOE2(3)<---------MYB46(3)   <---------HSFB2a(2)   gaatattttattcttagtgccgttggttcttttgtgaaatttgttcacctaaaacaaagaacattggtcggttgattatataattctataagaattaatt  11720000                 <----------DOF2           <---------HSFB2a(1)           <---------HSFC1(2)          <-----------ARR10          <---------ARR11(1)          --------->GLK1(2)          ------->TEIL         <---------ARR14(1)                        --------->ANAC46         <---------GLK1(2)                         --------->ANAC58         <---------CCA1(2)                    <---------ICU4<---------ICU4    <-----------GT1      <-----------GT1      ------>ZmHOX2a(2) --AHL20(2)--------->HSFB2a(1)              <---------ARR11(3) ->AHL20(2)--------->HSFC1(2)           --------->YAB1   --------->YAB1 -AHL20(2)--------->ARR14(2)       <---------ATHB12--------->ANAC58                   <----------DOF2 >AHL20(2)<---------ARR14(2) <----------DOF2--------->ARR11(3)     <----------DOF2   --------------->AGL15   tagtattttccgaatcttcctttgtttttagcttttaatcaattgtgatcttgacgcaaaaatcattttctttgtagtaagtgttttccttttatcgaat  11720100                                                                                                   --                                                                                            <--------                                                                                            -------->HAHB4                                <---------ANAC58                                            ---------                     --------->YAB1                                                        --------->ICU4          --------->MYB52(1)    <---------ANAC58                         <---------MYB52(1)<---------ATHB51         <---------ATHB51    ------>ZmHOX2a(1)                 <---------ANAC58          --------->YAB1         <---------AHL20(2)  <----------DOF2                   <---------ANAC58         <---------YAB1      <---------AHL20(2)   ------>ZmHOX2a(2)      xxxxxxxxxxxxxxxx>smallRNA(i)   --------->YAB1------     --------->AHL20(2)  <---------ARR11(3)   <-----------RAV1(1)       <-------GAMYB  <---------AHL20(2)     <---------AHL20(2)  --------->ARR11(3)  ------->TEIL <<<<<<<<<TBF1<---------ZAT6  --------->AHL20(2)   tttcaaattaaataatggaccattgatgatcctttcttgagtatgtgtatgttgttgttcttcttccttgcgactgttaactatagtattttaataatga  11720200                  <------MYB83              --------->STY1(2)              <---------STY1(2)              <---------ZAT2             --------->MYB111(1)            <--------P                  <-------GAMYB          <---------MYB46(3)           --------->MYB111(1)       <---------ANAC58                --------->MYB52(2)       <---------ANAC46                <---------MYB46(3)  <---------AHL20(2)                   --------->MYB111(2)  --------->ATHB12<------MYB46(1)      --------->MYB46(2)                                   --------- --------->AHL20(2)                    --------->MYB55(2)                                   --------- --------->AHL20(1)                  <--------P                                             --------- <---------AHL20(2)                  <---------MYB52(1)                                  <------ZmHOX2a(2) <---------AHL20(1)                 --------->At5g28300                                 --------->ARR11(3) ------->GLK1(2) --------->MYB59  <------------MYB.PH3(1)     ------->GAMYB            <---------At4g35610 -ICU4 <---------ANAC58         --------->MYB52(1)           <---------ANAC46          --------->At4g35610 >YAB1--------->ATHB12          ------------>AtMYB77  <----------DOF2                 XXXXXXXXXXXXXXX --->YAB1<---------ZAT6      --------->YAB1         ------->TEIL             ----------->HVH21   gaatttattgagtggtagctaggtattagtatcgtaacggttagttggaacatgaactttgtaacgggcagaaaatgttgtgacatttcagatcacgcac  11720300  Previous    Next  AGI:  At4g22120.1    Description:  early-responsive to dehydration protein-related / ERD protein-related. similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G04340.1); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G04340.3); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G04340.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO24038.1); similar to CM0545.360.nc [Lotus japonicus] (GB:BAF98597.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69661.1); contains Range:  from: 11715836    to: 11719804    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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