Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->YAB1                                    <---------ANAC55(2)                                    --------->ANAC55(2)                                 <---------AHL20(2)                              --------->AHL20(2)                              <---------AHL20(1)                                  <---------HSFC1(2)                              <---------ARR11(3)                                  --------->HSFC1(2)                              --------->AHL20(1)                            ---------->DOF2    <---------ZAT6            --------->ARR11(3)                         --------->HSFC1(1)  ----------->GT1            --------->CCA1(2)                           --------->HSFB2a(2) ---->GT1                   --------->ARR11(3)             --------->ZAT6<---------HSFB2a(2)     ---- ->DAG2---------->DOF2      <---------ARR11(3)  ----------->GT1          <---------HSFC1(1)----------   taattagtgaaaagaaatcgagttttgagagatatattatgtattgataagtgtaaaacttacactgtctattttcgagaaagaaacatcggtatgacat  11713800                                                        ===============================HOX2a_HOX2a                                                        ------>ZmHOX2a(2)                                                      <---------ARR11(3)                                                      --------->ARR11(3)                                                      <---------AGP1                                                      ------->TEIL                              <----                                                  ------->MYC3                                  -----                                                  <-------MYC3                             <---------GLK1(2)                      ==============================HOX2a_HOX2a                            <---------ARR14(2)               <----------DOF2                ------>ZmHOX2a(2)                            --------->ARR11(3)              ------>ZmHOX2a(2)              <------ZmHOX2a(2)                          --------->HSFB2a(2)              ===============HOX2a_HOX2a    <---------ARR14(2)                  --------->LBD16<-----     ------->TEIL     ------>ZmHOX2a(1)     --------->ARR14(2)                  ------>ZmHOX2a(1)     <-------TEIL     ===============================HOX2a_HOX2a              ======================= <---------------AtSPL8                   <---------MYB46(3)                  ----------->RAV1(2) --------->ARR11(3)  <---------MYB59     --------->ALFIN1              <---------ATHB12 <---------HSFB2a(2) ------>DOF2<---------ARR11(3)         <---------ANAC46--------->GLK1(1) <---------ANAC58  <---------ARR11(3) ->HVH21    --------->ARR11(3)        <---------AtMYB61<---------GLK1(1) <---------ANAC58  --------->ARR14(2)   aaagatgtacatatgatctttatcctaacttcataagcttgaggtggatccacatggatctcttctatcaccaatgcttctcctggttttctagatactg  11713900           --------->ARR14(2)                                                     <---------ANAC55(2)     <---------AtLEC2                                                            <---------LBD16 <----------DOF2                                                          ------->TEIL    <---------ARR14(2) -----At4g35610         <---------ANAC46                           <---------GLK1(2) <---------ANAC46 ---->At4g35610  --------->GLK1(1)                              <---------WOX13(1)--------->ANAC55(2) ------RAV1(1)   <----------DOF2                          <---------MYB46(3) <---------ICU4 ======RAV <---------ARR14(2)             <---------TOE2(3)  <---------YAB1 --------->ICU4--------->ARR14(2)   ctgctttgcatcgaatcggctttccttcgtgaatggagaacattgatgttttctccatggtggatgatagattatgaacttattacggagtggatttgag  11714000                                                                                                 <---                                                                                              -------                                                                                              <------                                                       --------->ANAC58               --------->AHL20(2)                                                       --------->ANAC58               <---------AHL20(2)                                                       --------->AtLEC2              <---------AHL20(1)                                                     <---------AtLEC2                --------->AHL20(2)                                 <----------DOF2<---------ARR14(2)                   <---------AHL20(2)                         --------->ARR14(2)     --------->ARR14(2)   --------->AHL20(2)   <---------AHL20(2)                        ------>ZmHOX2a(1)       ------->TEIL   <-----------GT1   <---------AHL20(2)    ----------->ARR10   <---------CCA1(2)      <---------CCA1(2)  <---------ICU4 --------->AHL20(2) -   agagagaagagactcacttgttcatcctatcttctctttctgtatagttgtatctgcatgcaaattaacaattacatagttttttaatttttttaatcaa  11714100                 --------->ATHB12                 <--------HAHB4                 <---------ICU4                 --------->YAB1                --------->ICU4              --------->YAB1              <---------ICU4                                      --------->YAB1       <---------AHL20(2)                                        <---------YAB1      <---------AHL20(2)               --------->AHL20(2)      --------->YAB1      --------->AHL20(2)               <---------AHL20(2)     <---------YAB1                   ------ --------->At5g28300                   <---------YAB1      --------->AHL20(2)                  ------ ------ALFIN1--------->ICU4        --------->AHL20(2)      --------->AHL20(1)                <------- -->YAB1   --------->YAB1  --------->WRKY38(1)             <---------AHL20(2)    --------->ATHB12 ---ICU4  <---------YAB1   --------->WRKY12                <---------AHL20(1)   <---------YAB1 ------ ---------->GT1 <---------YAB1<---------WOX13(1)   <---------CCA1(2)            --------->ICU4------>ZmHOX2a(1)   cactgtaattttataataatcatttctagttgactgattatataattaagctcgtctctaatttattatcaaaataggtgtaaagattgaaacgtcctac  11714200                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                             <-------GAMYB                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                       --------->ARR11(3)                                                                                --------->ZAT2<------                                                                          --------->ANAC58  ---------                                  --------->YAB1                          --------->ANAC58  <-------- -->P                  <-----------GT1   --------->GLK1(2)        --------->ICU4<---------ZAT2<------ >MYB83 <---------ANAC58        ------->TEIL                 ----------->GT1    <---------At4g35610 --MYB59<---------ANAC58       <---------GLK1(2)     <---------ETT(2)   ---------->DOF2<---------ARR11(3) >MYB46(1)          --------->AHL20(2)  *TSS   ------->TEIL<------------CBF     --------->At4g35610   ctatattttgtcttgtggtcaattttttctactgaatcttaagaatatgaaactgttgacatattgtattaatggaaagcacagctcgagatcgtggttg  11714300                                                                    --------->MYB52(1)                                                                  <---------MYB111(1)                                                                  <------------MYB.PH3(2) --MYB46(1)                                                       <---------MYB46(2) --MYB83 ---------->DOF2                                          <---------MYB52(2) ------>GT1                                                       --------->MYB46(3) -----MYB46(3)                                                  --------->MYB52(1) ----AtMYB61                     <---------ANAC46              ------->GAMYB --->MYB46(2)                  --------->ARR11(3)             <------------MYB.PH3(2) --->MYB55(2)                  <---------ARR11(3)             <---------MYB46(2) --->MYB111(1)                 --------->ARR14(2)    <---------AHL20(2) ----MYB46(3)                  --------->GLK1(2)     --------->AHL20(2) --->MYB111(2)                 <---------ARR14(2)   <---------AHL20(2)   <----------DOF2 ----DEAR3(1)                 <---------ARR14(1)    --------->AHL20(2)   <---------DAG2 --P <----------ID1   <---------ICU4            <---------YAB1<---------MYB111(1)             <------ >MYB55(2)            <---------AHL20(2)  <---------AHL20(2)  <---------MYB52(2)      <---------AHL20(2) -MYB46(3)           <---------ATHB12    --------->AHL20(2)   --------->MYB46(3)  <---------AHL20(2) ---MYB55(1)         --------->AHL20(2)  <---------AHL20(2)   <---------MYB111(2)<---------AHL20(2) -   gtgaattaagacaaagccaactaataaatacagtatcttgtattttaattttgattaaattccaactaactaacgctttattttttattttttttgagat  11714400                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                -----                                                                                            <-------MYC3                                                                                            ------->MYC2                                                                                            ------->MYC3                                                                                            ------->PIF5                                                                                            <-------PIF5                                                                                            <-------MYC2                                                                                           <---------O2                                                                                           --------->TGA1a                                                                                           <---------TGA1a                                                                                           --------->ANAC46                                                                                      --------->ARR14(2)                                                                                <---------HSFB2a(2)                                                                                --------->HSFB2a(2)                                                                             --------------->AGL15---                                             <-----------GT1            <----------DOF2    <---------ANAC55(2)                              --------->ANAC58                       <---------ARR11(3)    --------->O2                              --------->ANAC58  --------->ATHB12     --------->ARR11(3)  <---------ALFIN1                         --------->LBD16------>MYB83      ===========================================bZIP_DOF              --------->YAB1<--------P<---------MYB59     ---------->DOF2    <---------------AGL15<-- ---At4g35610<-------TEIL------>ZmHOX2a(1) --------->AHL20(2)     <-----------GT1     <---------ARR14(2) ---------->RAV1(1)     <---------ANAC46------>MYB46(1)--------->CCA1(2)=============================bZIP_DOF   ggcaacattcttacattcatatggttcctggtaagtaagaccaaattaaaccattggatacaaagaaataacatctttgcttcaagaagaaccacgtgaa  11714500                                                                                          --------->ANAC58                                                                                       <---------ARR14(2)                                                                                       XXXXXXXXXXXXXX                                                                                       --------->ARR14(2)                                                                                    --------->ANAC58                                                                                    --------->ANAC55(2)           <------ZmHOX2a(2)                                                        --------->ANAC58          --------->ARR11(3)                                                        <---------ANAC55(2)          <---------ARR11(3)                                                        --------->HSFB2a(2)   --------->YAB1        --------->MYB52(1)                                         <---------HSFB2a(2) ------>ARR14(2)        <---------ATHB51                                           <---------LBD16 <- -------ARR11(3)        --------->ICU4                                            --------->MYB52(1) -------ARR14(2)   --------->ANAC58                        --------->TOE1(2)     <---------SPL7    <- ------>ARR10      --------->ANAC58                        --------->TOE2(2)   <---------ZAT6   <---- ------>ARR11(3)   ----------->GT1   <---------MYB46(3)    --------->TOE2(3)   <---------------AtSPL3 -------GLK1(2)  --------->MYB52(1) <--------P       <-------TEIL          --------->ZAT14--------->ANAC58   gatactcatgaagatcaaaaaacgaaataatggaaatggttgttttgagaagagattcaaacctaagagtcaagtagagtagtcttacggaaacgaaact  11714600                                                                                                    -                                                                                                    -                                                                                                  <--          <---------YAB1                                                                          <--     <---------TOE2(3)           <---------ICU4                                                  <--- XXXXXXX>MIR447A/B               --------->YAB1                           --------->ANAC46     ------ --------YAB1               <---------MYB52(1)                 <-------TEIL                   ------- --------AHL20(2)     <---------RAP2.6(2)                     --------->CCA1(2)               ------- ------DOF2--------->YAB1  <-------GAMYB           <---------ARR11(3)   <-----------GT1      <-------   ttttattgaggtattataagttttgcgactgttattcattacaatattgccaacatctaagaagattcaaaatttcacatcacaataaactggtttcgtt  11714700  Previous    Next  AGI:  At4g22110.1    Description:  alcohol dehydrogenase, putative. Identical to Alcohol dehydrogenase-like 5 [Arabidopsis Thaliana] (GB:Q0V7W6;GB:O65459;GB:Q8LGK8); similar to alcohol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G22430.2); similar to alcohol dehydrogenase, putative [Arabidopsis thaliana] (TAIR:AT1G22430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61679.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Alcohol dehydrogenase, zinc-containing, conserved s Range:  from: 11711348    to: 11714240    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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