Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->SPL7                                                <---------ARR14(2)                                                --------->ARR14(2)      --------->GLK1(2)                                               <---------SPL1(2)       --------->ARR14(2)                                               <---------SPL7          <---------GLK1(2)      =====================HOX2a_HOX2a        --------->DEAR3(1)    <---------TOE2(3)      ------>ZmHOX2a(1)                    --------->ANAC58      <--------P     --------->TOE2(3)                     --------->ANAC58--------->GLK1(2)  --------->ZAT14     --------->TOE1(3)                     --------->ANAC46------->TEIL<---------ARR14(2)  --------->ARR14(2)                    =====================================HOX2a_HOX2a  <---------ARR14(2)              <---------ANAC46      <---------MYB52(2) <---------ANAC46  <---------ARR11(3)              <---------ANAC58    ---------->DOF2 <------ZmHOX2a(1) <---------CCA1(2)  ------>ZmHOX2a(2)   <------ZmHOX2a(2) --------->ARR11(3)  <---------ZAT14    ---- -------GT1 ---------->DOF2       <---------ANAC58  --------->LBD16 <---------TOE1(3) <---------SPL7   accatatccttagcgaaagtgatccacaatggtttggcttggatcacgccgtaccgcaaagaacctggttgaggattctgtgcattgtcgtaagggtttg  11702300                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                      --------->ANAC55(1)                                                      --------->ANAC46                                                   --------->MYB46(3)                                                   <---------MYB55(2)                                                  ------>MYB83                                                  ------>MYB46(1)                                   -                                             --------->ARR14(2)                                     -                                             <---------ARR14(2)                                     -                         --------->LBD16     --------->GLK1(2)             --------->ATHB12         -                         ------>NtERF2  ------->TEIL------->GAMYB  <---------ARR11(3)              <-                <----------DOF2    --------->At4g35610--------->ANAC58    <---------YAB1<-----------HVH21            <-----------GT1       <-------TEIL    -------->P      <------MYB83     <------NtERF2   --        --------->AHL20(2)--------->ANAC46   <-----------ARR10    <------MYB46(1)  <---------At4g35610   ----------->GT1  <----------DOF2<---------At4g35610--------->ANAC58<----------DOF2<---------ZAT18- ------->HVH21 <---------DAG2    <--------P <---------ARR14(1) <---------MYB52(1)  --------->At4g35610   tgacaacgtataaattacctttctttccgcccaaggtagatgaaccgaatccaaccacgcaatccgctaggtctttacgattggcagcccagtcagactt  11702400              <---------ZAT14              --------->ZAT18              --------->ZAT14          <------ZmHOX2a(1)     ----------->RAV1(1)     ------>NtERF2   <------NtERF2  ------>NtERF2 --------->MYB52(1)  <---------RAP2.6(3)  <---------ATERF1(1) >>>>>>>>>AtERF-5 --------->RAP2.3(2) >>>>>>>>>AtERF-4                                    --------->MYB52(2) --------->RAP2.6(2)                                 --------->MYB46(2)                  --------->ATHB51 --------->RAP2.3(3)                                 --------->MYB111(2)                <---------MYB52(1) >>>>>>>>>AtERF-3                                    --------->MYB55(2)                 --------->ICU4 >>>>>>>>>AtERF-7                                    <---------MYB46(3)                 <---------YAB1 --------->RRTF1(3)                                  --------->MYB111(1)              <---------ICU4 --------->DEAR3(1)                                 <--------P                --------->LBD16 >>>>>>>>>AtERF-1                                 ------------>MYB.PH3(2)    --------->ANAC58 <---------ATERF1(2)                              <------MYB83               --------->ANAC55(1) --------->ATERF1(2)                             <---------AtMYB61           --------->ANAC55(2) >>>>>>>>>AtERF-2<---------LBD16                 --------->MYB111(1)         --------->ANAC58 --------->RRTF1(2)                             <--------P                   --------->ANAC46 -------->ATERF1(1)                          <---------LBD16            ---------->TaMYB80 -------->DEAR3(2)      --------->YAB1      <---------LBD16             <---------ARR14(2) -------->RAP2.3(1)    <-------TEIL        <---------LBD16              --------->ARR14(2)   <------- -------->ERF1<---------ABI4(2)    <---------LBD16<------MYB46(1)--------->ALFIN1  <-----------GT1 --------At4g35610   <---------ARR14(2)--------->ARR14(2)      ------->GAMYB<---------LBD16<---------YAB1 ------->At4g35610   --------->ARR14(2)<---------ARR14(2)     <------------AtMYB77 --------->YAB1 <-- -------->RRTF1(1) --------->LBD16 <---------At4g35610<-------GAMYB    <----------TaMYB80--------->AHL20(2)   gagccgccaacaggagtccaccggattcatgatgttctgcggtttctcggggaggtagttggcaaccgtgggggtatacccgtaataaccattattttcg  11702500                                                                         <----------DOF2                                                                       <------MYB46(1)                                                                       <------MYB83                                                                      <---------MYB46(3)                                                                     --------->ALFIN1                                                                   <---------ANAC58                                                                   <------MYB83                                                                   <------MYB46(1)                                                                  <------MYB46(1)                                                                  <------MYB83                                                                  <---------MYB46(3)                                                                  --------->MYB111(1)                                                --------->At5g28300<---------ANAC46                                               ----------->GT1    --------->MYB55(2)                                            --------->MYB52(1)  <--------P                                         --------->ANAC46     <---------MYB46(3)       --------->ANAC58                  --------->ANAC58     --------->ATHB12       --------->ANAC58                  --------->ANAC58    --------->ICU4  <---------TOE2(3) ----GT1                              <------NtERF2          <---------YAB1  <---------TOE1(3) -------AtLEC2       --------->YAB1<------ZmHOX2a(1)---------->DOF2<---------ANAC58          ------>ZmHOX2a(2)   gcatggaccaaggaatgacataagaatagtaccacgaggaggcacgaaacggtgaaaagagtcatggttgggtgggtttatggtttgagtagggatcgat  11702600                                                                                                   <-                                                                                                   <-                                                                                               <-----                                                                                        =============                                                                                        ------>ZmHOX2a(2)                                                                                       ==============                                                                                       <------ZmHOX2a(2)                                                                                      --------->ARR11(3)                                <------ZmHOX2a(1)                             *TSS    <---------ARR11(3)                              <---------TOE1(3)                            <---------AtMYB61   ======           ---------->DOF2    <---------TOE2(3)          --------->ETT(1)  --------->ALFIN1    ------      ----------->GT1 --------->ANAC58                   <---------ANAC46--------->ALFIN1<----------DOF2    ---------->DOF2   --------->ANAC58    <---------At4g35610 --------->ICU4----------->GT1   <------   actaagaaaagagaaaagatgggcaagtacttaaggaagtgtttagatgagagattgtgtcggaaagattagaaggtgtggtaaacacgatcttttccta  11702700           --------->ARR11(3)           <---------ARR11(3)       ---------->DOF2                                            <---------ANAC58 --------ICU4                                                     <---------ANAC58 -----------CBF                                          <---------TOE1(2)                 ------>NtERF2 ----------AGL15                                     <------ZmHOX2a(2)       ------->TEIL  <---------RAP2.6(3) =HOX2a_HOX2a                                       <---------ARR11(3)    --------->ANAC58--------->RAP2.6(2) =HOX2a_HOX2a ---------->DOF2            <-----------RAV1(1)  <---------ANAC58           --------->DEAR3(2) ==================HOX2a_HOX2a           <---------REM1(1)    <---------ANAC58--------->HSFB2a(1)   < >ZmHOX2a(1)<------ZmHOX2a(2)    <----------DOF2    --------->ARR11(3)    --------->ANAC58--------->DEAR3(1) -----------AGL2      <------------CBF   <---------MYB46(3)  <-------TEIL <---------MYB52(2)       <-   atattggcctaaagatcaaagttgtattggtgagactttggtgttgttgcacaagatcacatgttcgtgcttccccacgaacatttctcaagccgacttg  11702800                                                                     <---------YAB1              <---                                                                     --------->ICU4             <----                                                                    <---------TOE2(3)           <----                                                                --------->YAB1                  <----                                                             <---------ICU4                <---------                                                            --------->ICU4                 ----------       <---------HSFB2a(1)                               <---------AHL20(2)             <----------DOF2       <---------HSFC1(2)                              --------->TOE2(3)           <---------ANAC46       --------->HSFB2a(1)                             --------------->AGL15       <---------ANAC58       --------->HSFC1(2)                              <---------------AGL15       <---------ANAC58   ----------->GT1                             <-----------GT1----------->GT1----------->HVH21 ------ ---------AtLEC2                   ----------->GT1     ============================================== --------MYB46(3)         ------->TEIL<---------AHL20(2) --------->AHL20(2)<---------At4g35610 <-----   ttggatggaaaattccaaagtcttaatgtattttgtttagttaattgtattacattacattaattagtataatgtttatctgatggggtgttttatgtac  11702900     ------>MYB83     ------>MYB46(1)    --------->WOX13(1)                                         <------------------------ANAC81     -- ------------AtSPL3                                 <---------TOE1(2)                              -- -----ANAC46                             --------->ANAC58   <----------DOF2                        -- -----ANAC58           ---------->ID1    --------->ANAC46   <---------DAG2                         <- -----ANAC58  --------------->AGL15      --------->ANAC58  <---------ANAC58                      <--- ------AtSPL3 ======================================================================================= ----->AtSPL8 <---------------AGL15    --------->ZAT6<---------YAB1                     --------->ANAC58 ->TEIL       ======================================================================================= =============================MADS_MADS<---------ALFIN1    <---------ANAC58             --------->ANAC58 --TEIL      <---------YAB1<----------DOF2          <---------TOE2(2)              <----------DOF2 --   gtgtaccaatccattactattttttgtttcttttacttcaaacactccatttcttatgtttgcttttttttttttttttagttttcttttaagcaaaaac  11703000             --------------->AGL15             <---------------AGL15            ----------------->AG            <-----------------AGL2            ----------------->AGL3            <-----------------AGL3          --------->ANAC58          --------->ANAC46         --------->TOE2(3)          --------->ANAC58      ------>MYB83    <---------MYB52(1)          ------>MYB46(1)   ----------->GT1            <---------MYB59 ---->MYB46(1)                <---------MYB46(2)          --------->AHL20(2)  <---------ANAC46 ------->ARR14(2)             <---------MYB111(1)        --------->AHL20(2)   <---------ANAC58 ------->MYB52(1)             --------->AtMYB61          <---------ATHB12     <---------ANAC58 --------ARR14(2)        --------->YAB1      --------->YAB1   <---------AHL20(2)   ----------->GT1 ------MYB59----------------->AGL2 <---------MYB59       <---------ATHB51  --------->ALFIN1 <-------- =============================MADS_MADS  --------->AHL20(2)  --------->AHL20(2)  <-------GAMYB ============================MADS_MADS   <---------AHL20(2)  <---------AHL20(2) --------->ALFIN1 ---->MYB83 ----------------->AGL1 --------->TOE1(3)     <---------AHL20(2)<---------AtMYB61---------   cgaaccggtatcaagccaaaaatggaatcataccaaacctaaattaaacagaattacaaataattttatatgagcgagtggtgtgttgaaaattatgtaa  11703100                                                            --------->ANAC58                                                            --------->ANAC58                                                          ---------->DOF2                                                       <---------TOE2(3)                                                       --------->ANAC58                                                       --------->ANAC58                                                    ===============================HOX2a_HOX2a                                                    <------ZmHOX2a(2)                                             <---------ANAC58                                             <---------ANAC55(1)            <------ZmHOX2a(1)                                --------->GLK1(1)  --------->ARR11(3)      ----------->GT1                      ----------->GT1        --------->ANAC55(2)          <---------TOE1(3)                      <----------ID1         <---------ANAC55(2)          <---------TOE2(3)     <----      <-----------HVH21    ---------->DOF2   <---------ANAC58      <---------------AGL15     <------- -ANAC55(2)         ---------->DOF2          <---------ANAC46      --------------->AGL15   <------ZmHOX2a(1) >ANAC55(2)  ----------->GT1    <---------GLK1(1) --------->At4g35610 <----------DOF2    <---------TOE2(3)   tacattagggtcacagtgtgaaaaaagaaaaaagaaatcccactattacgtgagatcaaggaaagcataccgttttaaggaaaaacaaaattaggatgat  11703200  Previous    Next  AGI:  At4g22080.1    Description:  pectate lyase family protein. Identical to Putative pectate lyase 16 precursor [Arabidopsis Thaliana] (GB:O65456); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT4G22090.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60346.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectate lyase/Amb allergen (InterPro:IPR002022); contains InterPro domain Parallel beta-helix repeat (InterPro:IPR006626); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 11700567    to: 11702678    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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