Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                <----                                                                                                -----                                         ----------->HVH21                                      <----                                        <---------RAP2.6(3)   <---------ANAC46                  <----                                    --------->ARR14(2)        <---------ANAC58                  <----                                 <----------CDC5          <---------ANAC58                      <----                              ------>NtERF2           <---------DEAR3(2)                        -----                              <------NtERF2           <---------MYB46(3)                        <----                              --------->ATERF1(1)    --------->ALFIN1                           <----                       <---------ANAC58--------->RAP2.6(2)<---------ANAC58                      -----                       <---------ANAC55(2)        <---------DEAR3(1)                  --------->TOE2(3)                       --------->ANAC55(2)--------->MYB52(1)  <---------ANAC58        --------->TOE1(3)           ------>NtERF2    <---------RAP2.3(2)   <---------ANAC46          <------NtERF2       -----          --------->DEAR3(1)<---------DEAR3(1)    <---------DREB2C(2)       --------->ALFIN1  <------ZmHOX2a(1)         --------->DEAR3(2) --------->ATERF1(1)----------->TGA1--------->LBD16       ----------->GT1        --------->SPL7 <---------O2 <---------ARR14(2)--------->MYB55(2)  <---------ANAC58===========      <---------SPL7   <---------ANAC58--------->ANAC46  <-------TEIL     <---------ANAC58---------->DOF2 -------->ZAT18  <---------YAB1<---------ANAC46----------->HVH21          <---------ANAC46===========   agtgcgatggtaccgcctcatgaatacgtggccgcgcgtagccgtaacggtgacggtggttcgtccgtgtttttgggcgtgggaagaacgttaaaaggac  11640400     ----------->HVH21 --------->bZIP60(1) <---------bZIP60(1) <---------TGA1a -------->HVH21           --------->ALFIN1                               <--------HAHB4 -----TGA1a              --------->REM1(2)                               <---------ICU4 ---->bZIP60(1)         --------->ALFIN1                  --------->ANAC58 -----O2                <---------ANAC46                  --------->ANAC55(2) -----bZIP60(1)       <---------ANAC58                    --------->ANAC46    <---------TOE2(3) -----bZIP60(2)       <---------ANAC46                    --------->ANAC58 <---------YAB1 -----ANAC58          <---------ANAC58                    <---------ANAC55(2)--------->AHL20(2) ---->O2<---------O2 <------NtERF2             ----------->GT1   <---------AHL20(2) -----ANAC58        ------>NtERF2             <---------TOE2(3) --------->AHL20(2) -----ANAC55(2)    --------->ANAC58           <---------YAB1    <---------AHL20(1)   >>>>>>>>>ARR2 ---->ANAC55(2)    --------->ANAC58           <---------TOE1(3) <---------AHL20(2) <---------AHL20(2) ---->TGA1a<-----------HVH21              <----------DOF2 --------->ANAC55(1)--------->YAB1 ==========bZIP_DOF--------->DEAR3(1) --------->LBD16    <---------TOE2(3)--------->TOE2(3)      ---- =====bZIP_DOF----------->ARR10   <---------ARR14(2)    <-----------GT1 <---------YAB1          <----   gtgacatgagacgggtcagagacgccgtgtggagccaaaccgggttttatggttaattttacgtaattaatttgatcattaatatttgattgtagtatat  11640500                                                                <---------AHL20(2)                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                           --------->AHL20(2)                                  <---------ZAT14       <---------ICU4                                  --------->ZAT14      <---------YAB1                      --------->AHL20(1)             <---------ICU4                      <---------AHL20(2)             --------->YAB1                             <----                      --------->AHL20(2)            --------->ICU4                              <---- ----->ATHB12         <---------AHL20(1)            <---------ATHB12                         <------- -----YAB1        --------->AHL20(2)           <---------ZAT6   --------->AHL20(2)           --------   gatttgtccatagagttgaagtaattaattaagcactatacaataactagtgtaatcatcatttatttaaaatcactcgtctattctacatgtaatttaa  11640600          ------>MYB83                ------->GAMYB        ------->GAMYB        <---------AHL20(2)        <---------MYB59      --------->AHL20(2)                         --------->YAB1      -------->P            --------->AHL20(2)                         --------->KAN4(1)    <--------     --------->WOX13(1)  --------->AHL20(2)                           <---------KAN4(2)    <--------- -----TOE2(3)            --------->AHL20(1)                          --------->YAB1       --------->At4g35610 -----YAB1------>MYB46(1)<---------AHL20(2)                    --------->ATHB12           <---------At4g35610 --AHL20(2)             --------->AHL20(2)<----------DOF2     <---------YAB1         <---------YAB1-- ->AHL20(2)  --------->AHL20(2)    --------->MYB52(1)       <----------DOF2          <---------TOE2(3)   cattgatcaaccaaattcaatatcaaaaaaattaattcaacggtctttctcttaaactctagctttgattagaataatcaagaatttaagatagctgaaa  11640700                                             <------NtERF2                                            ------>NtERF2                                          <---------LBD16                                          <------NtERF2                                          <---------------------WRI1                                          --------->ATERF1(1)                                         <---------DEAR3(2)                                         <---------ERF1                                         <---------RAP2.3(1)                                        <---------RAP2.3(3)                                        <---------RRTF1(3)                                        <---------DREB2C(2)                                        <---------At1g77200                                        <---------DEAR4(1)                                        <---------RAP2.3(2)                                        <---------RRTF1(2)                                        <---------RAP2.6(2)                     --------->AHL20(1) <---------DEAR3(1)            --------->REM1(2)        <-----------RAV1(1)          --------->LBD16          <---------DOF5.7(2)         <---------ANAC46        --------->DOF5.7(2)         <---------ANAC58        <---------MYB52(1)         <---------ANAC58--------->AHL20(2) --------->LBD16         <---------ANAC55(1)------------>MYB.PH3(1)      <-----------GT1--------->AHL20(2) --------->ETT(1)    --------->KAN4(2)<---------AHL20(2)--------->DDF1        --------->AHL20(2)             --------- -------AGL15       <---------AHL20(2) --------->RAP2.6(3)   --------->YAB1               <---------- --------AGL2       --------->AHL20(2)<-----------HVH21--------->YAB1                --------->AHL20(2) --------->GT1  --------->ICU4  --------->At5g28300    ----------->GT1             --------->TOE2(3)   atggaatatttccgtgtaaaaattaaattaaaaccgttaatgtcggcgggacataaatggtaataaaaaaaaactcgtgagaaaacataaatttcccaat  11640800                                                                <----------DOF2                                        <---------AHL20(2)     <---------ANAC58                                        --------->AHL20(2)     <---------ANAC58                     -                            --------->ANAC58                <--------P <---------At4g35610         --                            --------->ANAC46     --------->TOE2(3)  --------->At4g35610         <----                   *TSS     --------->ANAC58     <-----------------AGL3--------->At4g35610      <----                  ------->GAMYB        --------->AHL20(2)  <---------ANAC58                     ----- --->CBF      ----------->HVH21  --------->GLK1(2)         <---------ANAC58--------->MYB46(3)   ----- -GT1       ------>ZmHOX2a(1) <---------ARR11(3) --------->TOE1(3)  <---------At4g35610    ----------   cggacttacttctcctctaaccgagaacacaagaaattctattaaaaaaaacctaaaaatgggttgctttagcagcaaacaccgaaacacagagagtgat  11640900            <---------ZAT14            <---------SPL7            --------->ZAT14           <---------ANAC46          <------NtERF2          --------->At4g35610 <---------YAB1                         --------->TOE1(3) -------->TOE2(3)                       --------->TOE2(3) ------->YAB1               <---------ETT(1) -----bZIP60(1)    --------->At4g35610 ----------->RAV1(2) -----TGA2(1) --------->SPL7<----------ID1 ---->GLK1(1) <---------ZAT14         -------->P                                                    < ---->bZIP60(1)    <---------At4g35610------->TEIL                    --------->ANAC58      ------>ZmHOX2a(1) ->GT1    <---------At4g35610      <---------ATHB12                   --------->ANAC58------>ZmHOX2a(1)   atcatcaatggcagcgtacagagctcaattccgacaaatcaacctgaaaaccatgtctctcgtgatgttctcaagcctcagaaacctccttctcctcaaa  11641000                       --------->YAB1                      <---------YAB1               --------->YAB1                                             <-------MYC2              <---------ATHB12                                            ------->MYC2            --------->WOX13(1) ------>MYB83                               <-------MYC3          ------->GAMYB<---------ICU4                                     <-------PIF5        -------->P  --------->YAB1                                        ------->MYC3       ------->GAMYB<---------ICU4                   --------->YAB1       <-------MYC4 --------->ATHB12      <---------MYB111(2)      ------>MYB46(1)  <---------MYB52(1)        ------->PIF5--------->MYB46(3)      <---------MYB55(2)       -------->P     ----------->GT1            --------->ANAC58          <-      --------->MYB46(3)      ----------->RAV1(1) --------->WOX13(1)     --------->ANAC58         --- ---------ETT(1)   <---------ATHB12  --------->GLK1(2)          ---------->DOF2  --------->ZAT6   ---   ttccgacaacaacccaatcaaatcatcatcaccaacaagaatccaaacccgttaatcagcaaatcgaaaagaagcacgttctaacacaaccattgaaacc  11641100                                                                   <---------ANAC55(2)                                                                   ----------->GT1                                                                   <------MYB46(1)                                                                   <------MYB83                                                                  --------->MYB46(2)                                                                  --------->MYB111(1)                                                                  --------->MYB59                                                                <---------MYB52(1)                                                               <-----------HVH21                                                              --------->ANAC58                                                              --------->ANAC55(1)                                                              --------->ANAC58 <------MYB83                                                   <------ZmHOX2a(1)  ---------->DOF2                                                  ----------->GT1<---------MYB55(1)           <------MYB83                                                 <---------TOE2(3)--------->MYB52(2)          <------MYB46(1) --------ATHB12                      <----------DOF2          --------->ANAC46 <------MYB46(1)------- --->MYB46(1)                      <---------------AGL15   <---------REM1(2)  --------->MYB59-------- --->MYB83                         --------------->AGL15   <-----------------AGL1     ------>NtERF2   aatcgtttttagagaaacagagacaattctaggcaaaccctttgaagaaataaggaaactttacacgttaggtaaagaattaggtcgaggccaatttggt  11641200      XXXXXXXXXXXXXXXXXXXXX>MIR173    --------->ANAC58     --------->REM1(1)                --------->ANAC58                          --------->ANAC58     <---------ALFIN1           <---------ALFIN1                            --------->ANAC58    ------>MYB83              ----------->RAV1(1)                         ---------->DOF2    ------>MYB46(1)        --------->ANAC46                   <------ZmHOX2a(1) --------->ANAC58    -------->P             --------->ANAC58                  ----------->GT1--------->ANAC58 ---->GT1                 ------->GAMYB          <---------ICU4     --------->MYB52(1) ->MYB59    ---------->DOF2--------->ANAC58     <---------ATHB12  <---------MYB52(2)        <--------   ataacctacacttgcaaagagaattcaacaggcaacacatacgcttgcaaatcaatactcaagaggaaactaacgagaaagcaagacatagatgatgtga  11641300  Previous    Next  AGI:  At4g21930.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G61930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17934.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) Range:  from: 11639769    to: 11640595    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g21940.1    Description:  CPK15 (calcium-dependent protein kinase 15); calmodulin-dependent protein kinase/ kinase. similar to CPK21 (calcium-dependent protein kinase 21), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to CPK23 (calcium-dependent protein kinase 23), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04740.1); similar to CPK9 (CALMODULIN-DOMAIN PROTEIN KINASE 9), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G20410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17935.1); similar to calcium-dependent protein kinase [Solanum lycopersicu Range:  from: 11640819    to: 11643653    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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