Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                    <                                                                                                    <                                                                     ---------->DOF2                <                                       --------->ATHB12 --------->ZAT14                             -       --------->WOX13(1)        <------ZmHOX2a(1)      <---------ZAT14       ---------->DOF2 ------- ----->YAB1                      =====================HOX2a_HOX2a<---------ARR11(3)     --------->AHL20(2) ->RAV1(1)<---------ICU4      <---------LBD16  <------ZmHOX2a(2) --------->GLK1(2)    ----------->GT1   cagaaatatcaatcttttcacagagattgaaaccaggaaattgatttagatcagtgactaaactcagtatctaaaggggataaagaacaagtatatacac  11619000        --------->YAB1       <---------At4g35610       <---------AtLEC2       --------->At4g35610      <-------TEIL -------->ARR11(3)             --------->AtLEC2 -------->ARR14(2)        <------ZmHOX2a(1) ---------ARR11(3)      <---------TOE1(3)                                                        ---- ---------GLK1(2)       <---------TOE2(3) ------>ZmHOX2a(1)             --------->REM1(2)       <---- ---------ARR14(3)<---------ANAC58       --------->TOE2(3)  --------->GLK1(2)                   <---- -------->ARR14(3)<---------ANAC58      ----------->GT1    <---------GLK1(2)                    <---- -->ANAC46        <---------ANAC46    ------->TEIL         --------->ARR14(2)                   <----   aagattttcatcagaacatagcgtttaaggaacatgcatgaatcctaaaaactctggacccgattcttaggctgtgtaaactaagctagtgactaattcc  11619100                                                                                <---------ETT(2)     --------->ZAT2                                                     <----------DOF2     --------->At4g35610                                              ------->TEIL     <---------At4g35610                                            --------->ZAT14       --------->TOE2(3) ----->LBD16              -------->HAHB4                            <---------ZAT14    <---------ARR11(3) -----ANAC55(2)           --------->ATHB12                        --------------->AtSPL8  <----------DOF2 -----ANAC58             <---------ATHB12                    --------->WOX13(1)<------ZmHOX2a(2) -----ANAC46      ----------->GT1        --------->YAB1    <---------YAB1     --------->ARR11(3) -----ANAC58     <---------TOE2(3)    ---------->DOF2     <-----------GT1     <---------ARR11(3)    <   gtagaagagctgagtaatctaggttaaatgattcgacattgaaagataacaactagagtttatcaatctctgtactttaagatcgacaataactttagaa  11619200                                                    <---------YAB1                                                  <---------ICU4            <---------TOE2(3)                     --------->YAB1            --------->MYB59                       <--------ATHB1        <----------DOF2                           <------------ATHB5    --------->ARR14(2)                           --------->ICU4      --------->TOE1(2)    <---------ARR14(2)                           <---------ATHB51    --------->TOE2(2)              -   <------NtERF2                                 <---------ATHB12   ----------->RAV1(2)            <-  --------->LBD16                           --------->ANAC58       -------->P             --------->ARR14(2)  ----------->GT1         ------->TEIL      --------->ANAC58    <---------MYB52(2)        --------->GLK1(2) ---------LBD16        <---------MYB52(2) ---------->DOF2      --------->At4g35610        <---------ARR14(2)   taggcggaaacttttaggtatagaaacgaacccagaaggaatgcgaaagcaataatggtagaagaagctaacctgcgagggatgagtaagcgaatttgag  11619300                 <------NtERF2                ------>NtERF2               <---------ANAC46              --------->RAP2.3(1)              --------->ATERF1(1)              <------NtERF2             <---------DEAR4(2)             <---------RAP2.3(1)             <---------ORA47(2)            <---------DEAR3(1)            <---------RAP2.3(3)            <---------RAP2.3(2)           --------->RAP2.6(3)           <---------ABI4(1)           --------->SPL7                                                                           -         ----------->HVH21                                                                         <-         <---------SPL7                 <---------TOE1(3)   <---------ANAC58       <---------HSFB2a(2)         <------NtERF2               <---------ATHB12  --------->ATHB12            --------->HSFB2a(2)       <---------ANAC58  --------->ICU4 <---------TOE2(3)   <---------ANAC58  <---------MYB46(3)   <-       <---------ANAC58  <---------ATHB12      <-----------GT1*TSS<---------AHL20(2)               -- -------->CCA1(2)<----------CDC5--------->ANAC58      <---------AHL20(2)    <-------GAMYB          -- ---------ID1<---------ATERF1(1)--------->ANAC58      <---------YAB1       <-----------RAV1(1)-------   agagacaaggcgggacggcgcagagcaatgaagaaggcaatgaaggttttttcaatttcattgcttaattcattttgctgttgttccaaaacaaaataga  11619400                      --------->AHL20(2)                                  <---------AHL20(2)  --------->ICU4     <---------AHL20(2)                                  --------->AHL20(2)--------->YAB1 -------->AHL20(2)   --------->AHL20(2)                            ----------->GT1        <---------YAB1 --------ATHB51 --------->YAB1                               <---------AHL20(2)         --------->YAB1 --------AHL20(2)  --------->YAB1 --------->AHL20(2)        <-----------TBP         <---------AHL20(2) ------->ICU4  --------->AHL20(2) <---------AHL20(2)        --------->AHL20(2)      --------->AHL20(2) ------->AHL20(2)--------->AHL20(2)  <---------AHL20(2) <---------AHL20(2)--------->AHL20(2)   <----- ---->GT1--------->ZAT6   --------->AHL20(2)            --------->AHL20(2)--------->AHL20(1)  -------   aataatttttaacacaaataaaaataaataaactaattttttattccaaaaatcaaatttaaatttatagagaaaattaattgcatttttttataataaa  11619500                                           --------->YAB1                                   ---------                                          <-------TEIL                                      ---------                                      --------->ANAC46                         ------>MYB83<---------ZAT6                                    <-----------GT1                            <---------ICU4                             <---------AHL20(2)                                ------>MYB46(1)                             --------->AHL20(2)                              <---------MYB46(2) <----                             <---------AHL20(1)                              --------->TOE2(3)<------                             --------->AHL20(1)                              <---------MYB59<--------                            --------->AHL20(2)  <---------YAB1              --------->ANAC55(2) <---- ------GT1 ---------->DOF2  <---------ATHB12 <---------YAB1    --------->TOE2(3)  <---------AHL20(2) -->AHL20(2)       <-----------GT1<-----------GT1         <---------YAB1  <-----------GT1<---------ANAC46   ctattcccatttttaaagaatttacattcaataaatttacacgattcattatagtagtttttcattgttaattagtttacctaattacatgtagtgtagt  11619600                           <---------ALFIN1                          --------->MYB46(3)                    <---------ANAC46                                          ----------->TBP                    <---------ANAC58                                         --------->AHL20(2)                    <---------ANAC58                                    ------------>CBF >ZAT14            <-------TEIL                <---------ZAT18       --------->AHL20(2) >ZAT18          ------->MYC2        --------->MYB52(1)              <---------AHL20(2) -----ANAC46     ------->MYC3       --------->ICU4 ------->MYC3  --------->AHL20(2)    <---------ALFIN1 ---ANAC46       ------->MYC4       <---------ATHB51     <---------YAB1<-----------GT1 ----------->RAV1(1) -ZAT14          <-------MYC3--------->ZAT2    --------->ZAT18   <---------AHL20(2)    ============== -----ZAT6       <-------MYC2----------->RAV1(2)   <-------MYC3  <---------YAB1--------->AHL20(2)   gtatgatatgtctaatacatgtgcgtgaaccacctggaataatggatagtccacatgttatgctcatataattaaacaatataaaatccccacatatgcc  11619700              ----------->TBP          <------NtERF2         ------>NtERF2        --------->RAP2.3(2)        --------->ATERF1(2)        --------->DEAR3(1)        <---------ATERF1(2)        --------->RAP2.6(2)       --------->RAP2.3(1)      --------->At4g35610      <---------At4g35610                                          --------->ANAC58 <---------At4g35610      <---------ATERF1(1)                                    ---------->DOF2  --------->At4g35610   <---------ANAC58                                       --------->ANAC58    <---------At4g35610----   <---------ANAC58                                       --------->ANAC58<----------DOF2    <-------   ----------->RAV1(2)                       --------->TOE2(3)     --------->ANAC58--------->ANAC58 ==============RAV         <---------YAB1    --------->TOE1(3)   <------ZmHOX2a(1) --------->ANAC58   tagttgcctgccgcctatatatgtatactatgattctaatggcattaccttaatctagtcacacaaaggacgaaaactttagctccagcaaacaaaaatg  11619800                                                       =================HOX2a_HOX2a                                                       <------ZmHOX2a(2)                                             ===========================HOX2a_HOX2a                                             ------>ZmHOX2a(2)                                            ============================HOX2a_HOX2a                                            <------ZmHOX2a(2)                                           <---------AGP1                                           --------->ARR11(3)                              --------->GLK1(2)                                           <---------ARR14(3)                             <---------ARR14(2)                                           <-----------ARR10                              --------->ARR14(2)                                           --------->ARR14(3)        <---------At4g35610  <---------GLK1(2)  --------->YAB1                           --------->ARR14(2)        <---------ZAT2       <---------ARR11(3)  <---------ICU4                           <---------ARR11(3)        --------->At4g35610----------->ARR10 <---------ATHB12                          <---------ARR14(2)    <------ZmHOX2a(1) ------>ZmHOX2a(2)- --------->ICU4                     ---------->DOF2   --------->ARR11(3)    --------->GLK1(2)      -- -------->CBF             ---------->DOF2----------->ARR10       =========================HOX2a_HOX2a --ICU4   --------->GLK1(2)    --------->CCA1(2)      <---------ARR11(3) XXXXXXXXXXXXXXXXXXXX>MIR851-5P   gcaatgatgaagaatccaaaccaatacacaaagatagagaaagaagatcttaatgagatcatccataggagagctcagtttctgatccacaagattctcc  11619900  Previous    Next  AGI:  At4g21900.1    Description:  transporter. similar to antiporter/ drug transporter [Arabidopsis thaliana] (TAIR:AT2G16650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46918.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 11616363    to: 11619362    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g21902.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G04745.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76789.1) Range:  from: 11619798    to: 11620151    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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