Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------YAB1               <---------AHL20(2)            --------->AHL20(1)                                                       <-----------GT1      --------->YAB1                                                             <---------DAG2 ------------AtSPL3  ------->TEIL                                                <----------DOF2 ------ZAT6 <---------AHL20(1)                      --------->TOE2(3)    XXXXXXXXXXXXXXXXXXXX>MIR838 ->ZAT14 --------->AHL20(2)                         <----------DOF2   --------->GLK1(2)          ---- --ZAT14<---------YAB1       ------->TEIL       ---------->ID1       <---------GLK1(2)       <-------   tggtactgtcattatatattatgaatctatgaaactgtgtttattagtttgtttctttaatccaaacttgagattctcttctactttttacatctctttc  11560800                                                                                                 ----                                                   ------>ZmHOX2a(1)                             <---                              <-----------GT1   ---------->ID1                                 <-----                         --------->ATHB12 <---------AHL20(2)                              <---------ATHB12 ----->WOX13(1)   ---------->DOF2     --------->AHL20(2)                        --------->AHL20(2) ---DOF2 <---------ICU4 --------->ICU4<---------AHL20(2)        <<<<<<<<<<<<<<<<<LFY<-----------GT1<-   aatctgtttcaatatgaccaaaaagaatgattttacagaaataaatatttgtccttatattgaagaaaacaatggctacaaataatatactaatcagtga  11560900                           --------->ARR11(3)                           <---------ARR11(3)                          <---------RVE1(1)                          <---------CCA1(1)                          --------->RVE1(1)                          <---------GLK1(1)                          --------->CCA1(1)                         <---------ARR11(3)                     ---------->DOF2                   <---------AHL20(2)                 ---------->DOF2               --------->AHL20(2)                   >>>>>>>>>RAP2.2               <---------AHL20(2)              ------------>CBF               --------->ATHB51             <---------ANAC58               <---------ICU4             --------->ARR14(2)               <--------ATHB1             <---------ARR14(2)              <---------ATHB51          <---------DEAR3(2)              --------->ICU4            <---------MYB46(3)            --------->YAB1--------->GLK1(1) <---------ANAC58 ----->At4g35610  --------->AHL20(2)   --------->ETT(1)                   ----------->HVH21   <------ ------At4g35610  <---------AHL20(2)   <---------DREB2C(2)              --------->O2       ---------- ----ZAT18 <---------YAB1--------->ARR11(3)<---------MYB46(3)           --------->ANAC46  <---------- ---------DOF2<---------ATHB12         <---------DEAR3(1)     <---------GLK1(2)   ----------->GT1   gctttgtcatgttctaataatttaaaagatatctatcgttgtcggttcttgcaatctaaagtcatattctttccaagtgacagaaggaaaattaacaatt  11561000                     --------->AHL20(1)               <-----------GT1                     <---------AHL20(2)          <---------YAB1                    <---------AHL20(2)         <-----------GT1                                 <-----                    --------->AHL20(2)        <---------YAB1                                   ------                   --------->AHL20(2)      <---------YAB1                                      <-----                   <---------AHL20(2)     <----------DOF2                             <---------ICU4 <---------AHL20(2)<---------AHL20(1)  --------->ARR11(3)                             --------->ATHB12 ------CBF ----------->RAV1(1)         <---------ARR11(1)          <---------GLK1(2)  --------->YAB1 -->CBF   --------->MYB46(3)          <---------CCA1(2)         --------->YAB1       <---------ATHB12 -GT1--------->TOE2(3)   <-----------RAV1(1)<---------ICU4 <---------MYB52(1)        --------->ICU4   gaattaatctcaacaacacaaattattttgttggcccatcaaatctttattactattttccattagtcagaattttgaaaatttcaaatcattagcaagc  11561100            <---------YAB1   <---------ANAC46   ----------->GT1   <------MYB46(1)         --------->DAG2   <------MYB83           ---------->DOF2          <----------DOF2  --------->MYB46(2)   --------->TOE2(3)     <----------TaMYB80  <---------MYB46(3)   --------->TOE1(3)   --------->YAB1  <---------AtMYB61    <---------MYB59    <---------ATHB12                                        <-- ----At4g35610<------------CBF      --------->ANAC46                                              --- --->ZAT2  <---------ARR11(3)       --------->ANAC58                                        --------- ----ZAT2  --------->ARR11(3)       --------->ANAC58                        <---------HSFB2a(2)   ---   tggtttggtgaaatatcattgtcaacctaaaagtgaagaagccactcatattccttttctgtctatataacttataatctcgaacacataaaaaatgaaa  11561200                                             --------->GLK1(2)                                   <---                           --------->ANAC58  --------->ARR11(3)                          <----------DOF2 <----------DOF2           --------->ANAC58  <---------ARR11(3)                         <---------DAG2 -------ARR11(3)           --------->ANAC46 --------->RVE1(1)                         ------->TEIL ------>GLK1(2)<---------ATHB51       ----------->GT1          --------->MYB52(1)    <-----------GT1 -->GT1        --------->ICU4    --------->YAB1               --------->ICU4      --------------->AtSPL8 ------>ARR11(3)           --------->bZIP60(2)                <---------ATHB51 <---------YAB1    ----   aatctttagtttctgaaattatggagaccaagtcatcaaaatgaaaaaatctatagtttatgaaataatggagactaagtcatcaatgtacctttctcag  11561300                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)                                                                       <---------CCA1(2)                                                                     --------->YAB1                                                                    <---------YAB1                                                                   --------->ARR11(3)       ---------                             --------------------->WRI1            <---------ARR11(3)       ---------                             --------->TOE2(3)                    --------->YAB1            ---------             --------->At4g35610                                 <---------YAB1            <---------LBD16    <----------DOF2 <---------ICU4                             --------->YAB1            <-------TEIL ------ARR14(2)     --------->YAB1           --------->At4g35610 --------->ICU4         --------->CCA1(2) ----->ARR14(2)  --------->REM1(1)  <---------YAB1            <---------YAB1     ---------->DOF2-----   ttccgactttggctctgcttcatcatcacaaccttggtctcattgtcatcttcaacaagatggtatgatgatcatatctcattgaaagagattcacgcag  11561400                                                          <-------TEIL                                                   -------->P                                               <---------At4g35610                                               --------->At4g35610 >ANAC46                               <---------GLK1(2)<---------GLK1(2)          --------->ZAT14  < >ANAC58                              <---------ZAT2  <---------TOE1(2)   <----------DOF2        <--- >ANAC58                     <----------DOF2<---------At4g35610       <----------DOF2     ------>ZmHOX2a(1) ---->At4g35610        <----------DOF2<---------At4g35610<---------ARR11(3)    <-----------GT1 ------   aagaaactttccattttccaaaaaactttctctttggcacagcttcttctgcttaccaggttcttagttcttctttcttttttacttcagtcctcaagta  11561500                                                                               <------NtERF2                                                                             <---------ATERF1(2)                                                                             --------->ATERF1(2)                                                                            --------->RAP2.6(3)                                                                           --------->MYB52(1)                                           ----------->GT1                ----------->TGA1                                   <---------ZAT18                        ------->GAMYB                                   --------->ZAT18                        ----------->HVH21                                 <---------ZAT18                         <---------MYB52(2)                                 --------->ZAT18                       --------->MYB52(1)                                <---------ANAC58                     <---------MYB59                           <-----------RAV1(1)<---------KAN4(2)     <---------ANAC55(2)       -------                   --------->TOE2(3) <----------DOF2                --------->ANAC55(2)   --------->ANAC46 -----------GT1   --------->ZAT6<---------ANAC58               <---------At4g35610        --------->ANAC58 ------YAB1      <---------TOE2(3) <---------ZAT14             --------->At4g35610        --------->ANAC58 --->YAB1       <-----------GT1 <---------ANAC46             <------ZmHOX2a(1)------>NtERF2   -------   taatacaatcttgtgttttaacattagttttgttgtgtgctcttatggtatattcagtatgaaggagcttacttaactgacggcaaaaccctaagcaact  11561600                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                          <---------AGP1                          <---------ARR11(3)                                           <---------TOE2(3)                          --------->ARR11(3)                                           <---------TOE1(3)                      <--------P                    <---------YAB1                =================== ---->RAV1(2) <---------ARR11(3)           ----------->GT1             --------->AHL20(2)          <- -->ZAT2      --------->ARR11(3)   <-----------GT1----------->GT1--------->YAB1   <----------DOF2<---   gggacgttttcacaaacatctctggtaagatctcatgaaaccattttgtaaattgtgatttaagctataacaaaaaattcaaaacttttagggtttttgt  11561700  Previous    Next  AGI:  At4g21750.1    Description:  ATML1 (MERISTEM LAYER 1); DNA binding / transcription factor. similar to homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G05230.2); similar to PDF2 (PROTODERMAL FACTOR2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G04890.1); similar to homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G05230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69679.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62139.1); similar to unnamed protein product [Vitis vinifera] (G Range:  from: 11556071    to: 11560745    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g21760.1    Description:  BGLU47 (Beta-glucosidase 47); hydrolase, hydrolyzing O-glycosyl compounds. similar to BGLU45, hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G61810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69674.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 11561241    to: 11563962    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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