Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->YAB1                                <-------GAMYB                      <---------YAB1                                 --------->At5g28300                    <---------ICU4                               --------->MYB52(1)             <----         <---------ETT(2)    <---------ZAT14               <---------AHL20(2)               ---------         --------->ETT(2)    <---------At4g35610     <---------AHL20(2)             <---------ANAC46 ------->ZAT14     <---------YAB1                   --------->YAB1<---------At5g28300       <-------- --------ZAT14     --------->ICU4          <---------GLK1(2)<-----------GT1    <----------DOF2 ------   gttcacagttgtctacaattgattattatagtgctgcgaatgctagagtctctataaaaatttaaacttacggttatagttctttggagtggatttatat  11548200                                     <---------YAB1                                    <---------ARR11(3)                                    --------->ARR11(3)                            <---------AHL20(2)                                                  <----                            --------->ATHB12                                                  -------                           --------->AHL20(1)                                                 <------                           <---------AHL20(1)                        --------->MYB52(1)      --------                           <---------AHL20(2)                        <-----------GT1         <-------                        --------->AHL20(2)                      ----------->GT1            <---------ICU4                        --------->AHL20(1)                   <---------YAB1                --------->YAB1                        <---------AHL20(2)                 <---------ICU4                 --------->AHL20(2)                       <---------ATHB51                    --------->YAB1                 <---------AHL20(2) -----AHL20(2)         --------->AHL20(2)                 <---------ATHB12               <---------AHL20(2) >AHL20(2)             <---------AHL20(2)                 --------->ICU4------->GAMYB   --------->YAB1 -AHL20(2)  ----------->GT1--------->AHL20(2)  <------ZmHOX2a(1)<---------ANAC46<---------AHL20(2) --->AHL20(2)          <---------ATHB12      <---------------------WRI1<------------MYB.PH3(1)-------   aatacactactagttggaaaaacaaataatttattgaatatcatttgtaggatgaaaacaatgatgatgtataacggtctatataatctatattaattat  11548300       <------MYB46(1)       <------MYB83                                            <-----------RAV1(2)     <--------P                          <---------YAB1       ------>MYB83 -----YAB1                           ------>MYB46(1)          -------->P          --------->HSFB2a(1) ->HAHB4                             ------>MYB83             ------>MYB46(1)     <---------HSFB2a(1) ---ICU4                           <---------MYB59         ----------------->AGL1 --------->HSFC1(2) ->ICU4----------->GT1       --------->YAB1               --------->ARR11(3)      <---------HSFC1(2) --ATHB51              XXXXXXXXXXXXXXXXXXXX>MIR169D-G     <---------ARR11(3)  ----------->GT1 -->YAB1    --------->ZAT6   <---------ICU4          --------->ANAC46        ----------->GT1   gactctagttggtaacactgaaatgaaacaaaaatgacctactatcatttagaacacgaagacctacaggggaaatgaaggggaaatttctagttttttt  11548400                                              --------->LBD16                                             --------->LBD16                                             <---------ANAC46                                       <---------ICU4                                       --------->ATHB12                    <------NtERF2     --------->ICU4              <---------AHL20(2)           <xxxxx                   --------->LBD16    <---------YAB1             --------->AHL20(2)          --------                  <---------ANAC46  --------->YAB1            --------->YAB1         <---------ICU4                 <---------LBD16    <---------ICU4            ----------->GT1        --------->ATHB12         <---------LBD16           <---------ATHB12      <---------YAB1              --------->YAB1   --------->AHL20(2)         --------->TOE2(3)      --------->YAB1                 <---------ATHB12   <---------AHL20(2)        --------->YAB1 <---------LBD16 <---------WOX13(1)      --------->ICU4  -   ttcaataaaatcgtggaatggcggagtttaaacataaatcatgattcccgtgaaatcatatgaatgataaaatttgaaactcacaaatcattaagctatg  11548500                                                                                >>>>>>>>>EIN3                                                                          --------->AHL20(2)                                                                         --------->AHL20(2)                                                                         <---------AHL20(2)                                                                        <---------YAB1                                     <---------MYB52(2)                 --------->ICU4                     --------->ARR11(3)                               <---------ICU4                     --------->AHL20(1)                              --------->ICU4                     <---------AHL20(1)                              <---------AHL20(2)        <-----------GT1      --------->AHL20(2)                      --------->AHL20(2) xxxxxxxxxxxsmallRNA(s)   --------->TOE2(3)    ----------->GT1       <---------ATHB51 ->CCA1(2)           <---------ARR11(3)--------->MYB52(1)          --------->YAB1<------------CBF -------->ICU4 ----------->GT1    --------->AHL20(2)     <-----------RAV1(1)   <-------TEIL        <-   caatgtttattatctatttgtaaaatattcttaaaataaactaacaaattagttattttttgttggaaaaaataattaatatacattgtatactacaagt  11548600                                                                                  <---------------AGL15                                                                                  --------------->AGL15                                                                                 <-----------------AGL3             ------>MYB46(1)                   <<<<<<<<<TBF1                     ----------------->AGL2           --------->MYB46(3)      --------->ANAC58                 --------->AtMYB61    <---------YAB1              <------ZmHOX2a(2)         <-------TEIL           ====================    --------->ICU4              ============================HOX2a_HOX2a          <-----------------AGL1 --------ZAT6------>MYB83     *TSS --------->ANAC58  ------>ZmHOX2a(1)    <---------GLK1(2)   <------   agtgtcatggttacccactcacttctcttgtccgatcaagtcatacttcttcttcctcgattcgtcttcaccatcacattctctctaaatttggccatct  11548700                                                                --------->ICU4                                                              --------->GLK1(1)                                                              <---------GLK1(1)                                                             <---------ARR14(2)                                                             --------->ARR14(2)                                                          --------->ANAC58                                                          --------->ANAC58                                                    <---------DAG2                                                    <----------DOF2              --------->AHL20(2)                    <---------------AGL15        <---------ANAC58                            --------------->AGL15        <---------ANAC58                           <-----------------AGL3    <----------DOF2           --------->AHL20(2) <---------ARR11(3)   ------>ZmHOX2a(2)          <---------AHL20(2) --------->ARR11(3)      <---------HSFC1(2)     <---- --------->ARR11(3)     --------->At5g28300  <---------ZAT6--------->LBD16                      ----- <---------ARR11(3)    ----------->GT1  <---------ANAC58  --------->ANAC46                      ----- ===================================================================MADS_MADS            ---------->DOF2 ---CCA1(2)   <---------AHL20(2)        <---------ANAC58 <---------LBD16 --------->HSFC1(2)     <----   cttgatcttttcttgtttaattgtatggtaaattatatgtttgcttagtgagaactttatacggaaatgcttagaggcttctccatcaaatgaaagaaga  11548800                                              --------->ANAC58                                            ---------->DOF2                             <---------YAB1                                            --------->MYB46(3)                        <---------ICU4                             ------>ZmHOX2a(1)--------->ANAC58                       <---------YAB1     --------->YAB1     <---------GLK1(1)  -------->P                    <---------MYB52(1)    <----- -----ARR14(3)          --------->GLK1(1)  ------>MYB46(1)            <-----------RAV1(2)--------->YAB1 ---->ARR14(3)         --------->HSFB2a(1) ------>MYB83         --------->YAB1       --------->ICU4 ---->ARR11(3)     --------->O2         --------->MYB46(3)     --------->ICU4      --------->YAB1 -----ARR11(3)     --------->ANAC46 <---------AHL20(2)       --------->YAB1       <---------YAB1   <-   ccttcactcatagttgtttccacgagagttcctcatattaaaaccaacaagcgagagtctctgtaataatcttcaggtatttctatcataatgaaaactt  11548900                                   <----------ID1                              <---------ARR11(3)                              <---------AHL20(1)                         <---------YAB1                        --------->TOE2(3)                       <---------ICU4                       --------->YAB1     <-----------GT1  <---------ATHB12                                         <---------YAB1     --- <---------AHL20(2)   --------->ICU4                                         --------->YAB1--------->LBD16 -----DOF2       --------->ANAC55(2)                     <-----------GT1  ----------->GT1 --------->HSFB2a(2) ---------DOF2   <---------ANAC55(2)          <-----------GT1      --------->ICU4         <---------HSFB2a(2)   tcttttatttcttcacaataagtaatcatcaatatatacaacaaatattaactatagaattactatgtcattttgagagttataattttgttccagagat  11549000                              <---------TOE1(2)                           --------->YAB1                <---------DAG2<---------TOE2(2)                                                  <---       --------->KAN4(2)  <---------YAB1                                        <---------ARR11(3)  -      <---------ICU4     <---------ARR11(3)        <---------AHL20(2)   --------->ATHB12         ----     <---------YAB1      --------->ARR11(3)     <---------TOE2(2)      <---------YAB1 <---------ZAT6<     --------->ICU4 <---------YAB1          <-------TEIL              <---------GLK1(2)  --------->ZAT18 ------->DOF2   <----------DOF2        ---------->DOF2         <-----------HVH21--------->ARR11(3)<--   gaaagtgatcattccgaactttatcaatatcataggttaactaaagttcatatgttattgagatgggtcatagattattgaagatttagtgttcacaaat  11549100  Previous    Next  AGI:  At4g21745.1    Description:  similar to RIC10 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 10) [Arabidopsis thaliana] (TAIR:AT4G04900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69681.1); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095) Range:  from: 11548630    to: 11550634    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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