Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ---------->DOF2                                                                       --------->LBD16                                                                      <---------ANAC46                                                                      <---------ANAC55(2)          <----------DOF2                             <---------YAB1  --------->O2        ---------->ID1                             <---------ARR11(3) --------->ANAC55(2)       <-----------GT1                             --------->ARR11(3) <---------O2 --------DAG2      <---------YAB1                ----------->ARR10<-----------HVH21            ------ ---------DOF2  <----------DOF2               ----------->GT1<---------PCF2<---------YAB1     -------   acttttttttttctttttcttttgatagtttttgcaatagagattggagagtagatattagtgggactcgtcccgtgatgaaagttagagcatccaaaaa  11544500        ------>ZmHOX2a(1)                                     ---------->DOF2       --------->TOE2(3)                                    --------->YAB1                      -----    <---------ARR11(3)                                     <---------YAB1              <----------DOF2 --->DAG2                        --------->TOE2(3)<---------YAB1                   <-----------GT1 --->DOF2              <---------AHL20(2)        <-----------GT1                <---------GLK1(2)<---   gctcaagttcctaaattccattgaattttttgttttcttaatatgtagaattttcattcttatcaaaagaaaaacaaatgtagaatttcctttcattaga  11544600             --------->ANAC46             --------->ANAC58                ---------->DOF2   --------->AHL20(2)                    ----------->HVH21                                          <   --------->YAB1         ----------------->AGL1                                                <----  <---------ATHB12        ----------------->AG                          <------ZmHOX2a(1)      ------  <---------ATHB51--------->ANAC58     ----------->GT1       --------->YAB1                    ------ ---->AGP1   --------->ANAC58         --------->DAG2        <---------ATHB12                   ------ ---ZmHOX2a(2)    --------->ANAC58 ---------->DOF2        --------->WOX13(1)                 --------   tccaataatatttgaacggcacaaaatttccaaataagaaagagtgacaaagagtctagccaatcagagaatgaggagaaagttttcacaaacatccttg  11544700                                    --------->LBD16                                   --------->LBD16                                  --------->ANAC46                                  <---------LBD16                                  --------->LBD16                              <-----------GT1                           <---------ICU4     <-----------GT1     --------->ANAC55(2) -------GAMYB          <-----------GT1 -----WRKY18(1)        --------->AHL20(2) --->WRKY38(1)     <---------AHL20(2)                                             <---------ANAC58 --->WRKY12     ----------->GT1  <---------LBD16          ---------->DOF2         <---------ANAC58 ----->HVH21<---------ICU4--------->ICU4              ---------->DOF2           <-----------GT1 ->TOE2(3) --------->ICU4<---------ANAC55(2)     <---------AHL20(2)     <-----------GT1   accgttgtaactaattagtagtaaattacttattacccgggaaaaccgtatttaagtaaagaaagttttcaatttcacgattttacttgccataacattt  11544800                                                          --------->AHL20(1)                                                          --------->ARR11(3)           ------------>CBF            <-----------GT1                               <---------AHL20(1)          <-----------GT1       <---------ANAC46                <----------DOF2  <---------KAN4(2)          --------->AHL20(1)       ----------->GT1             <-----------GT1  --------->HSFB2a(2)            --------->ARR11(3)  --------->ANAC55(2)             <-----------GT1  <---------LBD16                --------->AHL20(2)  <---------ANAC55(2)   --------->At4g35610        --------->ETT(1)           ----------->TBP  <---------ANAC58      <---------At4g35610        <---------ANAC46         --------------->AGL15<---  <---------ANAC58    <-----------RAV1(2)     <------------CBF             <---------YAB1        <--- ------->TEIL       <-----------HVH21  <---------DAG2<------NtERF2  <---------ZAT18<---------ARR11(3)   gtgtacgtgtcgttatactatttgtcagatgacttatttccctttttcaattgtcgggaatattttgtagtagacttactataaatatatacaattctag  11544900                                                                                                   --                                                                                             --------                                                           <---------GLK1(2)                 --------                      <---------ICU4               --------->YAB1                     ----------->HVH21                    --------->GLK1(2)              <---------ICU4               --------->ICU4     <- --------->ANAC46  --------->YAB1                 <---------ATHB12      ============================= ------ANAC58     <---------ATHB12              --------->WOX13(1)      <----------DOF2      <------- ------ANAC58 ------------>CBF               *TSS --------->ICU4   ------>ZmHOX2a(1)<---------At4g35610   cttactccacaaataaaccaataatctttgtaacgaaggaaaccaaaaaacaatcatggctgattcttcctattcttttgtcatgaagatgacagtgaag  11545000                                                                                       ------>ZmHOX2a(2)                                                                                       ==============HOX2a_HOX2a                                                                                      --------->GLK1(1)                                                                                      ===============HOX2a_HOX2a                                                                                     --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                                --------->DEAR3(1)         <------NtERF2                                                          ------->GAMYB       ========================bZIP_DOF                                         =====================       --------->TGA1a                                                         <------------AtMYB77      --------->RAP2.3(1)                                                      --------->MYB46(3)    --------->DEAR3(1)                                                         ======================   --------->DEAR3(2)                                                          --------->DEAR3(2)  --------->MYB52(1)                                                         <---------ARR14(2) --------->ANAC46                                                            --------->ARR14(2) <---------ALFIN1                                                         --------->ANAC46 ------->AtMYB61                                                          --------->LBD16 ->REM1(2)                                                           <---------SPL7--------->DEAR3(1) ->ZAT14------>NtERF2                                 ------>ZmHOX2a(2)  <---------HSFB2a(2)       -- --------ALFIN1     <----------DOF2                 <---------ARR11(3)   --------->HSFB2a(2)       <- ================bZIP_DOF<---------MYB52(2)         --------->ARR11(3)<---------ARR14(2)      ------>ZmHOX2a(1) --ZAT14<-----------HVH21--------->MYB46(3)     <---------MYB52(1)  --------->DEAR3(1)<------ZmHOX2a(2)   accacaccggcgtcagatttagctttaacaaacctcgcctattgttctccgtttgatctccatcgtttcgccgttcccgaaaccgccgatctcttcctcg  11545100      <------NtERF2    <---------DEAR3(1)  <-----------HVH21                       <---------AHL20(2)                            --------->YAB1 --------->O2                        =================================HOX2a_HOX2a       -------->HAHB4 <---------TGA1a                     <----------DOF2                                   --------->ICU4 ===============================================bZIP_DOF                             --------->YAB1 --------->TGA1a                     ------>ZmHOX2a(1)                    <---------DAG2<---------ICU4 <---------O2                    --------->ARR14(2)                  <-----------GT1 <---------ICU4 ==========MYC_MYB               <---------ARR14(2)            ------>ZmHOX2a(2)    <---------AHL20(2) ==========MYC_MYB              --------->GLK1(1)            --------->ARR11(3)     --------->AHL20(2) ------->MYB52(1)               <---------CCA1(2)            <---------ARR11(3)<----------DOF2 --------DOF5.7(2)       --------->WOX13(1)              --------->YAB1   <----------DOF2   ctaacgtcggagaagtttttgttctatcaatctcatatcctttttttattcacttacaattttgatcttattcacacttttctttattaattatcgtcgt  11545200                                                                                       --------->CCA1(2)                                                                                  ---------->DOF2                                                                              <---------ZAT2                                                    ----------->GT1           --------->At4g35610                                               ---------->DOF2                <------NtERF2    <-----                                       <---------GLK1(2)                      <---------At4g35610               <---------LBD16        <---------At4g35610                     --------->ZAT2   ------              <---------ALFIN1 <----------DOF2<---------ATHB12               <<<<<<<<<AtERF-4 <------MYB46(1)           --------->PCF2<-----------GT1--------->GLK1(2)<-----------GT1     <<<<<<<<<AtERF-3 <------MYB83   ttctaaacattttgtcccacgggtttatcacatctttttcagattccaattaagcagttataccttcttatggagatggcagctcaaagagatggcaggt  11545300                                                                                                    -                                                   <---------ANAC58                               <--   <---------ARR14(2)                              <---------ANAC58  --------->ANAC46           <----   --------->ARR14(2)             --------->bZIP60(1)              <-----------GT1             ------ ----ARR14(2)         ----------->GT1    <---------ICU4       <------ZmHOX2a(1)           <---------At4g35610 --->ARR14(2)      <------ZmHOX2a(1)    <---------ATHB12   <---------LBD16    --------->CCA1(2)<-----   ctgaagagccggtttacattaggaaggaaaaactcgacatcactcatttcatggattgtcttcaggaatttacccaagagatttgaagtttcagttcatt  11545400  Previous    Next  AGI:  At4g21720.1    Description:  similar to unknown [Picea sitchensis] (GB:ABK23300.1) Range:  from: 11542502    to: 11544620    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g21730.1    Description:  expressed protein Range:  from: 11544945    to: 11545539    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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