Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->HSFB2a(2)                ------>MYB83      <---------HSFB2a(2)    --------->At4g35610                           --------->MYB52(1)     <---------LBD16     <---------ARR14(2)                             --------->At4g35610 ------>ZAT2             --------->GLK1(2)                              <---------At4g35610 -------At4g35610        --------->ARR14(2) ---------->DOF2          --------->At4g35610 -------ZAT2--------->KAN4(2)<---------At4g35610                   --------->YAB1       --------->YAB1 ------>At4g35610    --------->YAB1      ------>MYB46(1)        --------->YAB1       --------->WOX13(1)   agcttgctctggaacatactctatcacaatctgctcacaaacctatcaaagagaaacatataccaaaaatcatcagcaaacgataaacaatcacaaaccc  11509500                                                                         ------>ZmHOX2a(2)                                                                        --------->At4g35610                                                                        <------ZmHOX2a(2)                                                                       --------->ARR11(3)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                       --------->GLK1(2)                                                                       <---------ARR11(3)                                                  ---------->DOF2     <---------GLK1(1)                                              --------->ZAT18    <---------ANAC46                                    --------->HSFB2a(2)          <---------ANAC58                                    <---------HSFB2a(2)        <---------MYB46(3)                  --                 --------->AtMYB61 <---------TOE1(1)        <-----------RAV1(1)                    <-              <---------ALFIN1     <---------TOE2(1)      ----------->RAV1(2)--------->ARR14(2) -----            <<<<<<<ZML2    ------->TEIL       --------->At4g35610<---------ANAC58  <----------DOF2---   taagaaaaaccctagaacacctctccatgaatcgagtacgagaagatgagcacaaagttaacctgtggctggggatctgtattctctttggattcagaag  11509600                                                                        <---------ATERF1(1)                                                                        ------>NtERF2                                                                       ----------->HVH21                                                                       --------->DEAR3(1)                                                                      --------->RAP2.3(1)                                                                      <------NtERF2                                                                     <---------ORA47(2)                                                                     <---------RAP2.6(1)                                                                     <---------RRTF1(1)                                                                     <---------ATERF1(1)                                                                     <---------DEAR4(2)                                                                     <---------ERF1                                                                     ------>NtERF2                                                                     <---------RAP2.3(1)                                                                    <---------ANAC46                                                                    --------->ATERF1(2)                                                                    <---------RAP2.3(2)                                                                    <---------ATERF1(2)                                                                    <---------RAP2.3(3)                                                                    --------->DEAR3(1)                                                                    <---------DEAR3(1)                                                                   --------->ATERF1(1)                                                                   ------>NtERF2                                                                   <------NtERF2                                                                   <---------ABI4(1)                                                                  <---------RRTF1(1)                                                                  <---------ATERF1(1)                                                                  <---------RAP2.3(1)                                                                  ------>NtERF2                                                                  <---------RAP2.6(1)                                                                 <---------RRTF1(2)                                                                 <---------DEAR3(1)                                                                 <---------RAP2.3(2)              <-------TEIL                                      <---------LBD16           --------->At4g35610                                  --------->At4g35610           <---------At4g35610                                  <---------At4g35610       --------->TOE2(2)                                       <---------ATERF1(1)       --------->TOE1(2)                                       <-----------RAV1(1)       <-----------HVH21                                      <---------DEAR3(1)     <---------HSFC1(2)                                    <---------ANAC58    --------->WOX13(1)     --------->HSFC1(2)                                    <---------ANAC46  --------->WRKY18(1)   <---------ARR14(2)                                 --------->At4g35610<------NtERF2     <---------GLK1(1)   --------->ARR14(2)                    ---------->ID1    <---------ANAC58 --------->At5g28300 ------->At4g35610         <---------ANAC58        <---------At4g35610--------->ATERF1(1)  --------->GLK1(1) --------At4g35610         <---------ANAC58     <<<<<<<<<TBF1----------->RAV1(2)      --------->ANAC46 ---->At4g35610 ------->TEIL         <----------DOF2  <---------At4g35610--------->ATERF1(1) -------->RAV1(1)    --------->REM1(1)  <------------------------ANAC81<---------DEAR3(1) <---------ARR11(3)   cagcagaaacgtccgatgcatctacatcggcttgggatgctttgttgttcttcttctgcttccgtctgcggcggcgacggtcaatctcacgagatttctt  11509700                   <---------MYB52(1)                 <---------ANAC58                 <---------ANAC58              <---------ARR14(2)                                       <---------DEAR3(1)             ----------------------->TaNAC69(2)                 <-------GAMYB           --------->ZAT14           --------->ALFIN1                                    <---------DEAR3(2)    <---------ANAC46        <---------AtMYB61                   --------->ANAC58   <---------MYB46(3)<---------ARR14(2)        <---------DEAR3(1)                  --------->ANAC58  <---------DEAR3(1) --------->ARR14(2)    <---------At4g35610   <---------bZIP60(1)              ----------->HVH21<-----------HVH21    --------->At4g35610   --------->bZIP60(1)             --------->ZAT18  <---------MYB46(3) <------ZmHOX2a(1)<-------GAMYB   <---------MYB52(1)     --------->ALFIN1 <---------DEAR3(1)   agaggaagcggaggtgtttccgttggagacatcaccgttagaaacgacgctatgaacgagtgcgacggttgaatcggcggtcatattcggtgttctctct  11509800                                                               ------->TEIL                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                            <---------ANAC55(2)                                                            --------->ANAC55(2)                                                        <----------TaMYB80                                                        <---------GLK1(1)                                                        --------->CCA1(2)                                                        --------->GLK1(1)                                                       <---------ARR14(2)                                                       ---------->TaMYB80                                                       --------->ARR14(2)                                                       --------->ARR11(3)                                                       <---------ARR11(3)          <---------At4g35610                                                      <------ZmHOX2a(1)            --------->At4g35610                                                     *TSS--------->ARR14(2)     <---------MYB52(1)            ---------->DOF2               <---------LBD16<---------ARR14(2)   <---------DEAR3(2)       <---------ANAC46                  --------->MYB52(1)<-------TEIL       <------MYB83--------->GLK1(2)       ----------->GT1      <------ZmHOX2a(1)  --------->GLK1(1)              <------MYB46(1)   gaatcggtgatgtgaaaagagagattgagaggagaaggaagaacgacggaaatcgaggatatacgtatatgaacaagagtcggtttgctgaaattctctc  11509900                                                     ------------>CBF                                                --------->ARR11(3)                                                <---------ARR11(3)                                                <---------ARR14(2)           <<<<<<<<<<GT-3b                                                --------->ARR14(2)   <---------DAG2                     --------->DAG2            <---------CCA1(2)     <----------DOF2            --------->ARR14(2)                <---------ARR11(3)  <---------ALFIN1          --------->LBD16                     --------->ARR11(3)<---------ALFIN1            ---------        <---------LBD16                       <---------AHL20(1)----------->RAV1(1)    <---------ZAT6   tgattctatttccggtttggcataaggcccatataagtagaagacgaatatatctgccaataggcccaacactttatatttttcttcgagtgtaagaatt  11510000   <---------HSFB2a(2)                                                         <-----------RAV1(1)   --------->HSFB2a(2)                                                        <---------TOE2(3) <---------ANAC46                                                          <---------YAB1      ------ >ICU4                                 ---------->DOF2             --------->ZAT6            <-------   gttttgtagaagaccatctactagtaactaatagaaaatttcaaaggaaatgtatggaacaatattcaaacactactataaatgttggcacgagttaact  11510100                                                      --------->ANAC46                                              <---------At5g28300                                         <---------AHL20(2)   <---------ANAC58                                         --------->AHL20(2)   <---------ANAC58       ----------->GT1                  --------->AHL20(2)    <---------ANAC46             --------->YAB1 --------->TOE2(3)                   --------->AHL20(2)     <---------ARR11(3)      <---------YAB1 --->ZAT6                            --------->YAB1--------->ZAT14           ---------->DOF2 <------- ----GT1                    <----------DOF2  <-----------GT1--------->ARR11(3) ----------->GT1   ----   ctacattattcgtaaaaatgttctattgaacttttaaaattataaaattacagtttacacaatgtcttgaaattttgaagaaagttataagtatcaaaat  11510200                                                                 <---------AHL20(2)                            <---------AHL20(2)                   --------->AHL20(2)                           <---------AHL20(1)               <---------AHL20(2)                           --------->AHL20(1)              --------->AHL20(2)                           <---------AHL20(2)              <---------AHL20(2)                      <---------AHL20(2)                --------->YAB1                     --------->ICU4     <-----------RAV1(1)   --------->AHL20(2)         --------->AHL20(2)              ----------->GT1 --YAB1               --------->AHL20(2)            <----------DOF2              <---------YAB1 ------->GT1     <---------TOE2(3)       --------->MYB52(1)<---------AHL20(1) <---------AHL20(2)   tgtatatatgtgggtatttgagatttaaataaaattctctgactaacaacaaaacttttaataaaatttaaatgttttagtttattattcgtaaaaattt  11510300                                                        <---------ALFIN1                                                       --------->ANAC58                                           <---------YAB1           ------->TEIL                       <---------YAB1   --------->AHL20(2)    --------->LBD16               ----------->GT1          <---------AHL20(2)   <---------LBD16         <---------YAB1              <---------TOE1(3)      --------->ARR11(3)--------->ANAC46        <---------MYB46(3)              <---------TOE2(3)<----------DOF2<---------TOE2(3)--------->LBD16<---------MYB52(1)     <---------AtLEC2<---------ICU4  <---------ARR11(3)--------->ANAC58     <---------MYB46(3)   <-----------GT1  --------->ICU4 <---------TOE2(3) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     -------   agtttttacatgaattgaggtaatttttattcactttgagattttattaatgtgagcacgactcccggtgtatgttatcggttgtttattatgcaattag  11510400  Previous    Next  AGI:  At4g21660.1    Description:  proline-rich spliceosome-associated (PSP) family protein. similar to pliceosome associated protein-related [Arabidopsis thaliana] (TAIR:AT1G11520.1); similar to PSP, proline-rich [Medicago truncatula] (GB:ABN05971.1); similar to hypothetical protein OsI_009333 [Oryza sativa (indica cultivar-group)] (GB:EAY88100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16928.1); contains InterPro domain Protein of unknown function DUF382; (InterPro:IPR007180); contains InterPro domain PSP, proline-rich (InterPro:IPR006568) Range:  from: 11505973    to: 11509853    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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