Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------ANAC58                                                   <---------ANAC58                                           <------NtERF2                                          ------>NtERF2                                <---------YAB1                                         --------->O2                                 <-----------GT1                  <---------ANAC58       <---------ATERF1(2)                         --------->YAB1                  <---------ANAC58       <---------DEAR3(1)                      <---------AHL20(2)                  <---------ANAC46       --------->ATERF1(2)                     --------->AHL20(2)                  <---------ANAC55(2)    --------->ANAC58                        <---------YAB1                  <---------ANAC55(1)    --------->ANAC58                     <---------AHL20(2)                  --------->ANAC55(2)    <---------bZIP60(1)                  --------->ARR11(3)               --------->ARR14(2)       --------->ATERF1(1)            <---------TOE2(2)      <------               <---------ARR14(2)       <------NtERF2         --------->ANAC58<---------ARR11(3)       <------MYB83--------->LBD16     ------>NtERF2          --------->ANAC58--------->AHL20(1)       <------MYB46(1)                 <---------ATERF1(1)--------->ANAC58    <---------AHL20(1)    <------ZmHOX2a(1)                 <---------DEAR3(1)  --------->ANAC58    --------->AHL20(2)   <- ->GT1--------->MYB59--------->REM1(2)--------->ETT(2)   ------>NtERF2 ------->TEIL <---------YAB1 --   aacagaggaaggtccaagttccgtgaagaaacagagtatggcgacggcagttttcttggcacccaagaaaacgtatgtaatatattattatcaattctag  11495100                                                                                                 ----            --------->ANAC55(2)                                                                 -----            <---------ANAC55(2)                                                        --------->ATHB12    <---------ANAC58            <---------AHL20(2)                                    <---------YAB1    <---------ANAC46        --------->AHL20(2)                                        --------->ICU4    <---------ANAC58        <---------AHL20(2)                        --------->ARR11(3)    <-------- ---HSFB2a(2)  --------->MYB52(1)        ----------->GT1--------->ICU4<---------ARR11(3) <---------YAB1 --------At4g35610      --------->AHL20(2)             <---------TOE2(3)            <---------At4g35610 ------->At4g35610  ----------->GT1    ---------->DOF2 <---------TOE1(3) <---------AHL20(2)----------   cagatgtcttgaatacataatggagataaattatatatatgaaaagtttaataggttaatgtttaatatagagattttatcttggaagatgattaaagta  11495200                                                                                                    <                                                                                                 ----                                                     --------->HSFB2a(2)                         ----                                         ----------->GT1 <------ZmHOX2a(2)        <-------TEIL ------    <----------DOF2                    --------->ZAT2<---------HSFB2a(2)         --------->CCA1(2)  - ------->TEIL                    <---------YAB1     <---------LBD16             <---------ARR11(3)  < ----->DAG2                   <---------YAB1      --------->ARR11(3)            --------->ARR14(2)  - ----->DOF2                   --------->ICU4  ---------->DOF2                   <---------ARR14(2) -- -TOE2(3)            --------->ANAC58  --------->At4g35610            <----------DOF2          <----- >DOF2               --------->ANAC58 --------->GLK1(2) <---------ARR11(3) --------->LBD16  <--------   aagtacctttgaagaagtgattcaagcatttgatgatgagaagctgtgaaaagttctggatcatcgtgttccctttccccaagatacactatataaacct  11495300   XXXXXXXXXXXXXXXXXXXX>MIR3440B-3P ---------AHL20(1) -->MYB83 -->MYB46(1) --->TOE2(3)                                                                                      <-- -------->AHL20(1)                                                                                --- ---------AHL20(2)       --------->DAG2                                                   <---------ANAC55(2) -------->AHL20(2)      ---------->DOF2                                                   --------->ANAC55(2) ------->AHL20(2)    --------->LBD16       <---------ZAT18                              <-----------GT1 ----MYB59         <---------LBD16         <---------ZAT14                   <----------DOF2   <----- ---GT1           --------->MYB52(1)       --------->ZAT14            <-----------GT1   --------->AHL20(2)   aataaattggccaaaaaaaacaccggaaaagtttagaaatatcagtaaactcttagcgattttcgcaaatagataccttcttttctctaattacatactt  11495400                             --------->ANAC58                       --------->ZAT2                           --------->ANAC58                       <---------At4g35610                      --------->ANAC58                       <---------ZAT2                         ---------->DOF2       <-----------HVH21     --------->ANAC58                 ==================================bZIP_DOF <-----------HVH21     --------->At4g35610                <------ZmHOX2a(1)                ---------- -------At4g35610  ------>ZmHOX2a(1)                     <----------ID1                 --------->ALFIN1 ------>At4g35610  <-----------HVH21               <------ZmHOX2a(1)                  --------->TGA1a -----DOF2   <---------ATERF1(1)         ----------->RAV1(2) --------->AtMYB61        <---------TGA1a   tgctgtcactgtctgaggctccttcagctgcaagaaaactcacccctgtcttaggaaataggaccaaagcaatcgacaatagaaacacaagtgtggataa  11495500                                     ----------->HVH21                                   --------->ALFIN1                                  ------->MYC2                                     <---------AHL20(2)                                  ------->MYC3                          ----------->TBP                                  <-------MYC2                          --------->AHL20(2)                           <---------ANAC58                           <---------------AGL15     -----                           <---------ANAC58                           ===============================                           --------->ALFIN1--------->ALFIN1        <-------TEIL    --------->AHL20(2)                         --------->ALFIN1  <---------ANAC46 <-----------TBP  ----------->GT1   ------                <---------TGA1a   <-------MYC3<---------ANAC46--------->AHL20(2)   <---------ATHB51 ->GT1        <---------ZAT14  <---------AtLEC2          <----------DOF2<---------AHL20(2)     ------   acagttctccattgtctgaagtgagaagtgtgtgcatgtgtgactgtgtggtatagaagcttttttatatacatataaatagtaaataattcgtcttaag  11495600                                        -------->ATHB1                                        <--------ATHB1                                       <---------YAB1                  <-------TEIL         <---------ATHB51                 --------->ARR14(1)    --------->ICU4                   --------->LBD16                --------->ARR11(1)  ------------>ATHB5         --------->YAB1  <---------AHL20(2)               ------------>CBF            ----------->GT1 <---------AHL20(2)       <------MYB46(1)<------------CBF     <---------TOE2(3) --------->YAB1 <---------GLK1(2)--------->ARR14(2)           <---------YAB1 <---------AHL20(1)       <------MYB83 <---------ATHB12     --------->YAB1 --------->AHL20(2)   --------->ARR14(2)--------->ATHB12   <---------YAB1 ------->CBF  ----------->ARR10  <---------ARR14(2)     --------------->AGL15                   <---- =======================================================================MADS_MADS             <------ --->ANAC58 <--------P<---------ARR14(2)--------->ATHB51<---------------AGL15          <-----------GT1 --->ANAC58<-------GAMYB --------->MYB59<---------ICU4 <-----------------AGL3     ----------->GT1----   caataaaatttggggttagattcgaatttggttcggattcaattattggtttattcaacttattatggtaattccgaatcagaccggttttatctctcgt  11495700                                                                                                    -                                                                                                   <-                                                                                               <-----                                                                                          <---------MYB59                                                                          --------->CCA1(2)    ------                                                                          <---------GLK1(1)    ------                                                                         <---------ARR11(3) ------>MYB46(1)                                                                    --------->YAB1        <---------MYB111(1)                                                                <---------------AGL15     <---------MYB46(2)                                                                --------------->AGL15   ------->TEIL< <---------ANAC58        <----------DOF2                       <-----------------AGL3 <---------ZAT18 <---------ANAC58        <---------DAG2                ---------->ID1    --------->ARR11(3) ------>MYB83 <---------ZAT6    --------->AtMYB61               <------------CBF<---------YAB1     <---------ZAT14 -----REM1(1)      --------->YAB1                <---------YAB1----------------->AGL3 --------->ZAT18 ---ANAC46<----------TaMYB80                    ------------>CBF<---------YAB1      --------------->AtSPL8 ----->REM1(2)  --------->ANAC46         <-----------GT1    <----------DOF2         <---------------AtSPL8   gtagcgttactgatattcccaccataactttttggctcagttttaactcttacaattgtcgtctttcttattatagatatacgaatagtgtacctaatta  11495800              <---------YAB1             --------->AHL20(1)             <---------AHL20(2)            --------->YAB1            <---------ICU4           <---------YAB1           --------->ICU4                           --------->ATHB51         ------>MYB46(1)                            <---------ICU4                 ----------->GT1       <---------MYB59                              --------->AHL20(2)          --------->MYB52(1)       --------->TOE2(3)                            --------->YAB1           <---------ANAC55(2)       <---------MYB46(2)                           <--------ATHB1           <------MYB46(1)      <---------ANAC55(2)                          <---------ATHB12          <------MYB83      --------->ANAC55(2)                    --------->GLK1(1)               --------->ANAC55(2)    <-----------GT1                          <---------GLK1(1)              --------->MYB46(2)      < -------->AHL20(1)                          --------->ARR14(2)              --------->MYB111(1)   <-- --------AHL20(2)                           <---------ARR14(2)              --------->MYB59       <-- ----AHL20(2)<---------AHL20(1)             <---------ARR11(3)            <---------MYB52(1)     ---- --->YAB1------>MYB83                       --------->ARR11(3)          <------MYB83--------->At5g28300 --->AHL20(2)--------->AHL20(2)            <------ZmHOX2a(1)            <------MYB46(1)          ---- ---------AHL20(1)              --------->ZAT6     <---------ATHB51    --------->MYB59  --------->ICU4   tatatattacctaattataattcaaatgagtataagactataagaggatatcaataatttctaactaaatgagtaggttaggtaactgtaattaagaagt  11495900        <---------ICU4        --------->ATHB12       <---------YAB1       --------->ICU4                       <---------AHL20(2)     --------->YAB1                        --------->AHL20(2)    <------ZmHOX2a(2)                     <---------YAB1   --------->ARR11(3)                   <---------ICU4   <---------ARR11(3)                   --------->ATHB12                                  <------ZmHOX2a(1) --------P  <---------WRKY18(1)         --------->YAB1                         --------->ANAC46 ----MYB46(1)                          <---------YAB1                        --------->REM1(1) ----MYB83<---------WOX13(1)           --------->ICU4  <----------DOF2      <---------REM1(2)     <-- ----->MYB111(1)       --------------->AGL15--------->AHL20(1)              <---------ZAT14 <------ZmHOX2a(2) ----->MYB111(2)       <---------------AGL15<---------AHL20(1)              --------->ZAT14 =========   tggtagatcatgattgactgaattactcaatttagtatagaatgattatattctgaacttttgaaatatagaagactctacaccgaaatataggatcaca  11496000  Previous    Next  AGI:  At4g21630.1    Description:  subtilase family protein. similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G21640.1); similar to ATSBT3.3, subtilase [Arabidopsis thaliana] (TAIR:AT1G32960.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G21650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62885.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48594.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62884.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPr Range:  from: 11492260    to: 11495512    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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