Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->GLK1(2)     --------->ARR14(2)     <---------ARR14(2)                                                        --------->GLK1(2)     --------->ARR11(3)                                                        --------->ARR11(3)     <---------GLK1(2)                                                         <---------ARR14(2)   ----------->ARR10                <---------------------WRI1              <---------AHL20(2) ->TOE2(3)                         <----------ID1                           --------->AHL20(2) ->YAB1  <---------YAB1            ----------->GT1                   <---------ICU4 --------AG                    ---------->DOF2                       --------->YAB1      --------->GLK1(2) --------AGL1         <---------GLK1(2)                             <---------ATHB12    <---------GLK1(2)   ttggtaagattctccttgagacttgattctctgcaaagggagaaatgttcagagacaagagtcatggtcaataatcaataaaatctggtcgattctgttc  11477600                                <----------DOF2                               <---------ANAC58                 <---------GLK1(1)      ------->TEIL        <----------DOF2        <---------ANAC58   <---------ARR11(3)     <-------GAMYB<---------CCA1(2)   --------->ARR11(3)    <-----------RAV1(1)  --------->RVE1(1)      <---------MYB46(3)  --------->CCA1(1)      --------->MYB55(2)        ----------->GT1  <---------GLK1(1)      --------->MYB52(2)        <------MYB46(1)  --------->GLK1(1)      --------->MYB111(2)       <------MYB83   --------->At5g28300 --------->ARR11(3)    <---------MYB52(1)         --------->MYB59----------->GT1                 <--- <---------ARR11(3)  <---------YAB1  --------->ANAC55(2) ---------->DOF2                         ----   atagatatctctttacaagagttctgtttgttggcttttatgtatctctgatttggtcaaaaagacactgtaactatggaacatatatagtatcaaataa  11477700              <------------CBF            <---------ATHB12           ------>MYB46(1)           ------>MYB83         <---------MYB46(2)                                             --------->DAG2         <---------MYB59                                 <---------AHL20(2)        <---------YAB1        --------->ANAC46                                 --------->AHL20(2)      --------->AHL20(2) ------At4g35610                    --------->ARR11(3)  <---------AHL20(2)       <---------AHL20(2) ----->At4g35610 --------->ATHB12 <---------YAB1     <---------AHL20(2)---------->DOF2      <--------   gctgttgtataccaaacattgatttcgaagtagaatatgattttgtaagaagtttttatttattttgggcttaaaaagtgtatttatttttgttaattgt  11477800                   <---------ALFIN1                  <-----------------AGL1                 <---------At5g28300                <-----------GT1           <---------ARR11(3)           --------->ARR11(3)                   --------->ANAC58          <------ZmHOX2a(1)                     --------->ANAC58       <---------ICU4            --------->ARR11(3)   ----------->RAV1(1)       --------->YAB1----------->RAV1(2)   <---------YAB1   <---------AHL20(2)--------->ZAT2  <---------YAB1----------->RAV1(1)                             <-  --------->AHL20(2) --------->At4g35610------->TEIL --------->MYB46(3)                 <---------MYB52(1) ----CBF<---------TOE2(3)    ---------->DOF2 ---------->DOF2   <-----------GT1    <---------DEAR3(2)   ttgatttaataaggatttttaccacctgaggcaaagaccatgaatatcaaaggcaacaacagttttgacttctctcgttttcatcggtccgtttgtactt  11477900                                      <---------ARR11(3)                                      --------->ARR11(3)                                  <----------                                      --------->GLK1(2)                                <---------ICU4 <---------YAB1          <---------ARR11(3)                                       ------------>CBF --------At4g35610       --------->GLK1(2)                          --------->AHL20(2)--------->ICU4   cttctgataaaaacaaaaattttgcaaaatctaacaacaaaatctttgattcgacaaactttgtaacaaaaaaaatcgaaactttgcaatttttacagaa  11478000                    <---------ANAC58                    <---------ANAC58                  <---------MYB46(3)            ----------->RAV1(1)                    <---------YAB1         ---------->DOF2           ----------->HVH21                  --------->At4g35610     <---------ANAC46          ------>NtERF2                       <---------At4g35610    <---------LBD16       <---------DEAR3(2)             <---------ANAC58     <---------At4g35610         <---------REM1(2)       <---------At4g35610            <---------ANAC58     <---------GLK1(1)      --------->ZAT18       --------->At4g35610   <---------ZAT18  <---------ZAT2        <---------ANAC46   --------->ZAT14 -GT1 <---------DEAR3(1)     --------->ZAT14--------->ANAC46     <-----------RAV1(1)   <---------ZAT14   tgagttcgtcgctgcgacagtggtttgctagagtactcgtgcttacacagctcatcaatggagctctgtgttggggaaaagaaggtcactacacagtctg  11478100                                         --------->At4g35610                                         --------->ZAT2         --------->ANAC58                                         <---------ZAT2         --------->ANAC58          --------->ARR11(3)                                   --------->GLK1(2)       <---------ANAC46<-------TEIL   <---------ARR11(3)                           --------->AHL20(2)             --------->At4g35610 ----------->GT1<-------                         --------->ANAC55(2)    --------->ZAT6---------->DOF2 --------->AtLEC2              --------->ICU4    ----------->ARR10    <---------TOE2(3) <---------YAB1    <---------GLK1(1) ---------->DOF2      <-------TEIL<---------GLK1(2) ---------->DOF2   --------->At5g28300<---------CCA1(2)   caaaatagccgaggtcaaaattgattcatgtaattagattctgagctcgaactctaaagttgctgaaagcactgtgattcatgtaaatttgatatctttg  11478200            <------ZmHOX2a(2)           <---------ARR11(3)       ---------->DOF2                --------->ARR14(2)      <---------AHL20(2)              <---------ARR14(2)    <-----------RAV1(1)      --------->AHL20(2)       <-----------HVH21            <---------YAB1   ------>MYB83               ------->GAMYB                 <---------AtMYB61   ------>MYB46(1)          <---------At4g35610          <---------MYB52(1)                       <-- <---------MYB59            --------->At4g35610<------ZmHOX2a(1)  <---------ANAC46        --------->ATHB12 ---DOF2   --------->ARR11(3)<------------AtMYB77      <---------ZAT6                 --------->TOE2(3)   gtaccaaattaaagatcgaattagctctgcaactgtcacaaatactctaggagattactgttatggtggagtctagatagatactaaacctttgatttgg  11478300                                                                                                 ----                                                   <---------------AGL15                       <-----                                                   --------------->AGL15                       <-----                            <----------DOF2       ----------------->AGL3                   --------->ZAT2                           <---------DAG2         <-----------------AGL2                   <---------ZAT2                     <---------------AtSPL8   <---------ICU4                   <------ZmHOX2a(1)<----                  --------->ANAC58         --------->YAB1                    <---------TOE2(3)<------             <---------ETT(2)           <----------DOF2        ------>ZmHOX2a(1)           <---------At4g35610             --------->ETT(2)    <---------ZAT6   ----------------->AGL2 <----------DOF2   --------->At4g35610 -------WOX13(1)  --------->ANAC58    <---------YAB1 --------->ICU4--------->AGP1   --------->GLK1(2)   attgaaatttttctgtagacaaggtagtaccttttgtgttatctttgataatgccatttttagtcctcagagctactttgaggaagaaactgtagctgcg  11478400                                 ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                                --------->CCA1(2)                               <---------ARR11(3)                               --------->ARR14(2)                     --------->ZAT2                     <---------ZAT2     <---------HSFC1(2)        --------->ARR11(3)     <---------HSFB2a(1)       <---------ARR14(2)     --------->HSFC1(2)----------->HVH21     --------->HSFB2a(1)       --------->AGP1 ----->At5g28300     <---------At4g35610              <---------ANAC58 ----ANAC46          --------->At4g35610      <---------At4g35610 ----DEAR3(1)        ----------->RAV1(2)   <---------MYB52(1)    ---------->DOF2 -----ANAC46 --------->TOE2(3)<---------GLK1(1)       <---------ANAC46  --------->ATHB12 ---LBD16    <---------MYB59  --------->GLK1(1)       <---------ANAC58----------->RAV1(1)         <--   gtgaagaaacttctacctaaatcagctgatggagatctagcatctgtttgctcatggcctgatgagattaagcaccattggcaatggcgatggactagcc  11478500  Previous    Next  AGI:  At4g21580.1    Description:  oxidoreductase, zinc-binding dehydrogenase family protein. similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G61510.1); similar to putative quinone oxidoreductase [Thlaspi caerulescens] (GB:AAY18430.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Quinone oxidoreductase putative, PIG3 (InterPro:IPR014189); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenas Range:  from: 11475731    to: 11477780    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g21585.1    Description:  ENDO4 (ENDONUCLEASE 4); T/G mismatch-specific endonuclease/ endonuclease/ nucleic acid binding / single-stranded DNA specific endodeoxyribonuclease. similar to ENDO5 (ENDONUCLEASE 5), T/G mismatch-specific endonuclease/ endonuclease/ nucleic acid binding / single-stranded DNA specific endodeoxyribonuclease [Arabidopsis thaliana] (TAIR:AT4G21600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24604.1); contains InterPro domain Phospholipase C/P1 nuclease, core; (InterPro:IPR008947); contains InterPro domain S1/P1 nuclease; (InterPro:IPR003154) Range:  from: 11478000    to: 11479965    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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