Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <-----------GT1                                                         --------->ATHB12                           ------->GAMYB               --------->SPL7                          --------->MYB46(3)        --------->LBD16  ------>ZmHOX2a(1)           ----                          --------->ANAC46         --------->HSFB2a(2)                      ---------      xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <---------HSFB2a(2)                      <--------    <---------TOE2(3)     <----------ID1<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)              <xxxxxxxxxxx   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      --------->At4g35610  <---------ATHB12     <---------WRKY38(1)     <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->YAB1--------->ICU4 ---->TOE1(3)   --------->ARR14(2)   ------->TEIL  <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------At4g35610 ---->TOE2(3)   <---------ARR14(2)   --------->GLK1(2)<xxxxxxxxxxxxxxxxsmallRNA(i)  <-----------HVH21   ttcaatgaggttgaagtatatatgctcaacgacaaaatgaatctgatcaacatcccgaacgattgtttctcctcccaaattatagctgtcaccataatga  11475300                                 --------->AHL20(1)                                 --------->ARR11(3)                                 <---------ARR11(3)                                 <---------AHL20(2)                                 <---------AHL20(1)                                      <---------AHL20(1)                                 --------->AHL20(2)             <---------YAB1           --------->AHL20(1)                           ----------->RAV1(1)                --------->YAB1   --------->ATHB51                          --------->DEAR3(1)               --------->WOX13(1)  <---------AHL20(2)                          --------->DREB2C(2)    --------->GLK1(2)             --------->AHL20(2)                          --------->At1g77200    --------->ARR11(3)            <---------ICU4    --------->YAB1        <---------ETT(1)       <---------ARR11(3)      ------>ZmHOX2a(1)<---------AHL20(2) --->TEIL                 --------->DEAR4(1)    --------->RVE1(1)     ---------->ID1     --------->AHL20(2) >YAB1                 <---------ALFIN1   ----------->GT1 ======================HOX2a_HOX2a -ICU4            <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       ------>ZmHOX2a(2)   <---------AHL20(2)   <- xxxxxxxxxxxxsmallRNA(i2)--------->DEAR3(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <---------AHL20(2)   acttattcatagtaattctgtagccacaccgacaatatatttcgatgtaaaaatctttgatccatcatatttgtcctaaaattatttctaatttatttct  11475400                                                                                      --------->ANAC55(1)                                                                                      --------->ANAC58                                                                                      <---------ANAC55(2)                                                                                      --------->ANAC58                                                                                      --------->ANAC46                                                                                      --------->ANAC55(2)                                                            --------->ATHB12         ------->TEIL                                                      --------->DOF5.7(2)            <-------TEIL                                                     --------->TOE2(3)           <---------------AtSPL8                                                    ----------->GT1              <---------------AtSPL3                                                   <---------TOE2(3)       <---------AHL20(2)                                             --------->ARR11(3)            <---------AHL20(1)                                             --------->AHL20(1)        <---------AHL20(2)                                <---------CCA1(2)  <---------TOE1(3)   --------->AHL20(2)                         ------>MYB46(1)     <---------AHL20(1)       --------->AHL20(2)                         ------>MYB83        <---------AHL20(2)     --------->YAB1<---------REM1(1)   <---------AHL20(2)  <---------MYB59     <---------TOE2(3)-------->ATHB1 --------->AHL20(1)  <---------YAB1       <---------MYB111(1)--------->AHL20(2)<---------ICU4--------->AHL20(2) <---------AHL20(2)   --------->ANAC55(2) <---------AHL20(2)--------->YAB1<---------AHL20(2) --------YAB1       <-----------GT1       --------->YAB1   <---------ATHB12--------->AHL20(2)   tatttttatttgttatctaaatatacctaatctcatagctctattaatattttgacgttaaatcattgtataataaataaattgatgtacgtaacatgtt  11475500                                  --------->ANAC46           --------->AHL20(2)     --------->ANAC58           <---------AHL20(2)     --------->ANAC58                                        --------->At5g28300      <-------TEIL       <----------DOF2        <---------YAB1               ----------->GT1  <---------ARR11(3) <---------ZAT14          --------->ATHB12       --------->TOE2(3)   <---------MYB46(3)  --------->ARR11(3) --------->ZAT14         <---------YAB1        <---------ARR11(3)    ----------->GT1  --------->AHL20(1) <---------ZAT18     --------->AHL20(2)        --------->ARR11(3) ------------>MYB.PH3(1) --------->AHL20(2)<---------At4g35610   <---------AHL20(2)     --------->AHL20(2)  ---------->DOF2   caaatatatacatttattttcagtagacttttagacacacaatttatatgattagagtcgaatgcataaaatctcaaacgcgaaaaataagcggttaaac  11475600                                                       <---------------AtSPL3                                                 <-------GAMYB                                                <---------MYB46(3)                                                --------->MYB55(2)                                               <---------ANAC46                                               <---------DEAR3(1)                                              <------NtERF2                                             <---------RAP2.3(1)                                            <---------ANAC58                                            <---------ANAC46                                            <---------RAP2.3(3)                                            <---------ANAC58                                            <---------DEAR3(1)                                            <---------RAP2.3(2)                                            <---------RRTF1(3)                                            <---------RAP2.6(2)                                            <---------RRTF1(2)                                        <------------CBF                                 --------->ANAC55(2)                             --------->At5g28300<---------DEAR3(2)         --------->ARR11(3)                            ----------->GT1<---------LBD16                 <---------GLK1(2)                          <---------At4g35610<---------RRTF1(1)            <---------ARR11(3)                  <---------AHL20(2) ----------------->AG           >>>>>>>>>>MYB80      --------->ANAC46            --------->AHL20(2)       ------------>CBF  <---------------AtSPL8           <---------LBD16          --------->AHL20(2)<---------MYB46(3)------>NtERF2     <------ZmHOX2a(2)     ----------->HVH21   ttttaaacacaaaataatataaaaattgagcggttaaatcccaattgcggcggttgaatagtaccgatcaaaccaaagattttggaatttgacggaacaa  11475700                                                         <---------HSFC1(2)                                                         --------->HSFB2a(1)                                 <-----------GT1         --------->HSFC1(2)                               *TSS          <---------ANAC46                          <---------ALFIN1   <---------ANAC58                --------->WRKY18(1)          <---------ANAC58                          ---------->DOF2                ------------>CBF--------->ZAT14     --------->HSFB2a(2)  ---------->DOF2           <------------CBF    <----------DOF2 <---------MYB52(1)<---------ZAT6--------->AHL20(2)     --------->ALFIN1--------->YAB1   <----------DOF2    --------->MYB46(3)----------->GT1   --------   ataaaccgtggagcattggtcaataacaacactctttactctttcttccgtttgctcgaaccatctagtctaagagaaagaaaaaatactaaagagaaag  11475800                                                                                      <---------REM1(1)                                                                                      <---------ANAC46                                                                                      ===============                                                                                      <-----------RAV1(1)                                                                                      <---------TGA1a                                                                                   <---------MYB52(1)                                                                                   ----------->HVH21                                                                                  --------->LBD16                                                                                  <-----------HVH21                                                                         --------->HSFB2a(2)                                                                         <---------HSFB2a(2)                                                                      --------->GLK1(2)                                                                      --------->ARR14(2)         <---                                                                    --------->HSFB2a(1)          ----                     <---------ANAC58                               --------->HSFC1(2)<---------O2                     <---------ANAC58                ------>NtERF2  <---------HSFB2a(1)       -------               --------->ANAC58                 <---------LBD16     <---------MYB46(3)<---------bZIP60(2)               --------->ANAC46                ------>ZmHOX2a(2)  <------NtERF2  <---------ANAC46<---               <---------ANAC55(2)           <---------ARR11(3)  --------->LBD16 --------->ANAC55(2)               --------->ANAC55(1)           --------->ARR11(3)<---------LBD16   <---------ANAC55(2)               --------->ANAC58          ------>ZmHOX2a(2) =====================================MYC_MYB               --------->ANAC55(2)       --------->YAB1<-----------RAV1(2)   <---------GLK1(1)<------     <------ZmHOX2a(1)                  <------ZmHOX2a(2)  <--------P <---------ARR14(2)--------->ALFIN1 -->DOF2      <---------LBD16    ---------->DOF2<---------HSFB2a(2) <---------HSFC1(2)===============   aagaagaggacttgaatacggaagcttgagagaatgaaagcgatcgtgatctcggagccaggtaagccggaggttctgcaactccgtgatgtggcagacc  11475900                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                         <---------GLK1(2)                  ---------     ---------->DOF2                                     --------->ARR11(3)                 <-------- ===============bZIP_DOF                                 <---------ARR11(3)               --------->DEAR3(1) --------RAV1(2)                                         <---------ARR14(2)               --------->AtMYB61 ----->HSFB2a(2)             --------->GLK1(1)           --------->ARR14(2)               <---------ALFIN1 -->ARR14(2)            --------->At4g35610            ----------->ARR10        --------->YAB1 ------HSFB2a(2)        <---------At4g35610       <---------ANAC58            <----------DOF2 ---ARR14(2)      <-----------ARR10        <----------DOF2                 ---------->ID1--------->MYB46(3) ========RAV   <---------TOE2(3)  --------->ANAC46<---------ANAC58---------->DOF2      --------->ANAC46   cagaagttaaagacgatgaggttctcatcagagttctcgctactgctttgaatcgtgcagatactctccaaagacttggcctttataatccaccacctgg  11476000                              <---------PCF5                           <---------HSFB2a(2)                       --------->KAN4(2)                      --------->HSFC1(2)                      <---------HSFC1(2)                      <---------HSFB2a(1)                      --------->KAN4(1)                 <---------CCA1(2)                 --------->ARR11(3)                      --------->HSFB2a(1)               <------NtERF2                     <---------ARR11(3) --------->ANAC58     <---------KAN4(1)               <---------ANAC58                    --------->AHL20(1) --------->ANAC58    <---------KAN4(2)                <---------ANAC58                --------->ARR11(3) >ZAT2               <---------TOE1(2)           ---------->DOF2                      <---------ARR11(3) -ZAT2           --------->HSFB2a(2)   <---------ARR14(2)                           <-------TEIL -->RAV1(2)      <---------HSFB2a(2)   --------->ARR14(2)                      <-----------RAV1(2) >O2      --------->TOE2(3)--------->HSFB2a(2)<---------DEAR3(2)          <------NtERF2--------->CCA1(2) -O2  <---------MYB52(1)  <---------LBD16   <---------MYB52(1)     ---------->DOF2 <--------P    ----   ctcaagcccttaccttggtctcgaatgttctgggaccattgaatccgtcggtaaaggcgtctctcgatggaaagtcggagaccaggtagatatatattcc  11476100           <---------HSFC1(1)                       <------MYB46(1)           --------->HSFB2a(2)                      <---------ANAC58           <---------HSFB2a(2)                      <---------ANAC58           --------->HSFC1(1)                       <------MYB83          <---------LBD16                          --------->MYB46(2)                     --------->ARR14(2)        <---------ARR14(2)                         <---------MYB46(3)                     <---------ARR14(2)        --------->ARR14(2)                    <---------TOE2(3)                          <------ZmHOX2a(1)     <---------ANAC58                         <---------TOE1(3)                        <---------TOE2(3)     <---------ANAC58          ------>ZmHOX2a(1)   --------->MYB111(1)       --------->ZAT2 <-------TEIL -->ZmHOX2a(1)                --------->TOE2(3)    <---------AtMYB61         <---------ZAT2--------->CCA1(2)   tgtgatttcgtttctggaaattagggactaatcctcaattttggttttagggtttggtgtctctgtgttaagttatccgagcttggatttaggatacaga  11476200  Previous    Next  AGI:  At4g21580.1    Description:  oxidoreductase, zinc-binding dehydrogenase family protein. similar to NADP-dependent oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT5G61510.1); similar to putative quinone oxidoreductase [Thlaspi caerulescens] (GB:AAY18430.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain Quinone oxidoreductase putative, PIG3 (InterPro:IPR014189); contains InterPro domain Alcohol dehydrogenase, zinc-binding (InterPro:IPR013149); contains InterPro domain Alcohol dehydrogenas Range:  from: 11475731    to: 11477780    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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