Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------ARR11(3)             --------->ARR11(3)            --------->RVE1(1)            --------->CCA1(1)           --------->ARR11(3)     --------->WOX13(1)--------->YAB1 ------MYB83<---------GLK1(1)            ------->GAMYB ------MYB46(1)    --------->LBD16       <---------MYB59                ----------->GT1 ------P   <---------ARR11(3)         --------->MYB52(1)              <---------ANAC46 ---->ATHB12--------->GLK1(1)  ----------->GT1--------->AHL20(2)   ----------->HVH21     ------->TEIL -----MYB46(3)   <---------LBD16      <-----------GT1      <----------DOF2   --------->MYB52(1)    --   gttggagcaattagatatctccgtatcaaaacagagtatataaccgaattaaaaactcaaactttatagatgactgggaaaacgggtgatgaactcgata  11472600                                                                                  --------->RVE1(1)              --------->AHL20(2)                                                 --------->GLK1(2)     --------->YAB1                                                              --------->ARR11(3)    <---------ATHB12          <---------ARR14(2)                           --------->ANAC58  --------->WOX13(1) ---------->DOF2                                       --------->ANAC58<---------ARR14(2) ------->ANAC46<---------AHL20(2) <---------YAB1                ---------->DOF2  <---------ARR11(3)--   aacccaatcagacccattaatttgaaaggtcgaattctgattttgtctatgttcccaagactgattcaaagctagataagcaaaatctctgtaaatctga  11472700                                          -------->P--------->ARR11(3)                                         --------->MYB52(1)           --------->At4g35610         <---------MYB59           <---------At4g35610         <---------MYB52(2) --------->ANAC58                    <-----------ARR10 --------->ANAC58                   <------ZmHOX2a(1)                                          ------ -------->DOF2 -------->P   ---------->DOF2     --------->CCA1(2)             <---------LBD16--------   acaaagcaaaattagctaaccagagagagagaaagagaggaactaaccagataagagctagggaagaagcgaagatgagactcggagagtgtgaagaaag  11472800       ------>ZmHOX2a(2)      <---------GLK1(1)                                                                         -----      <------ZmHOX2a(2)                                                                       -------      --------->GLK1(1)                                                                      ------>NtERF2     <---------ARR14(2)                                                                      <-------     --------->AGP1   <------ZmHOX2a(2)                                                     <--------     <---------AGP1  --------->ARR11(3)                                                     <--------     --------->ARR11(3)                                                                <---------ICU4     <---------ARR11(3)                                                          --------->YAB1<-----     --------->ARR14(2)                                                 --------->ALFIN1    <--------    <---------CCA1(2)<---------ARR11(3)            <-----------------AGL3       <---------YAB1<------NtERF2    --------->At4g35610                          --------->ANAC58      ------->MYC3  <---------AHL20(2) ----->GT1         --------->MYB59               --------->RAP2.6(2)   <-------MYC3<---------YAB1   - -->DOF2       --------->MYB111(1)               --------->ANAC58 <---------MYB52(2)--------->YAB1  -   tgaatcagatctcttagtagttagatcatgaagaattgagggagcatgagaccgccattaatggagtcacaaacgtggtcgtattataaaaatggcgacg  11472900       <-------MYC2       <-------MYC3       ------->MYC3       <-----------HVH21       ------->MYC2       <-------PIF5       ------->PIF5      --------->ANAC55(2)      --------->TGA1a      <---------ANAC55(2)      <---------TGA1a      --------->ANAC46      --------->bZIP60(2)      ======================================bZIP_DOF      <---------O2      --------->O2 ->NtERF2 -->ATERF1(1) --ATERF1(1) -RAP2.3(2)            --------->ATHB12                                                ---------->ID1 -RAP2.3(3)      --------->ANAC58                                                    <-----------RAV1(1) ----ANAC46      --------->ANAC46                                            <---------ALFIN1 -DEAR3(1)     --------->CCA1(2)           <------NtERF2 <-------MYC3       <---------REM1(2) <------ -------->WRKY12 --------->ANAC58---------->DOF2         ------->MYC3      <---------ALFIN1   <------ -------->WRKY38(1)   <---------YAB1    --------->RAP2.6(3)               <---------ZAT18    *TSS   cgtttaccacgtgagagagacgctacgattgcataaaaagaagtcggcattggtatacatgtgtctctctgattcgtccacacggttttgtcgcatttgt  11473000                                                                                  <---------REM1(1)                                                                                  --------->bZIP60(1)                             <------MYB83------->TEIL                      >>>>>>>>>ARR1                             <------MYB46(1)                               <------------CBF                            --------->MYB46(2)                             >>>>>>>>>ARR2           <-   ---------->DOF2          --------->MYB59  <------MYB83<-------TEIL     --------->ATHB12<---------- -----RAV1(1)              <---------ORA47(1)<------MYB46(1)    <------------CBF  <---------bZIP60(1) ---MYB46(3)  <----------DOF2<---------DEAR3(2)     <---------TOE2(3)    <---------YAB1 --------->ARR11(3)   tggagaaaagataagtcttttaaacagaggtcggtatggtatgtatttggtttcaaggattcatgaaattgatatatgattgtgatgtaagttattgatt  11473100                 --------->TGA2(2)                <-----------TGA1                <-----------HVH21               --------->ANAC55(1)               ====================================bZIP_DOF               --------->ANAC58               --------->ANAC55(2)               --------->TGA1a               --------->bZIP60(2)                        <----------DOF2               --------->ANAC58                  --------->ARR14(2)               --------->ANAC46                  xxxxxxxxxxxxxxxx>smallRNA(i)                       <               <---------O2                      <---------ARR14(2)               <---------ALFIN1  -        --------->YAB1                  ---------->DOF2------->TEIL              <------NtERF2  <---- ----------GT1 --------->O2           --------->YAB1  <---------CCA1(2)     --------->DAG2    <------ --CBF  <---------ICU4 --------->At4g35610      <------ZmHOX2a(1)         ---------->DOF2   ---------   ttttcttcattcattacacgtcatgggctgagagaagaaatcaaaagagaggatttgtatctttgagcccaaaaaaaaaaggcaccatcttggaccattg  11473200           ------>MYB83           ------>MYB46(1) ----------->GT1     <------MYB46(1)       <---------ANAC46     <------MYB83         --------->ALFIN1                                      --------->ANAC58   <--------P           <---------ANAC46                                        ----------->GT1  <-------GAMYB      --------->ICU4                                          <------NtERF2 <------MYB83     <---------AHL20(2)                          --------->AHL20(2)--------->ANAC58 <------MYB46(1) --------->AHL20(1)                --------->YAB1            --------->At5g28300 <---------MYB46(3)--------->YAB1                 <---------YAB1            ----------->GT1 ---------AtMYB61--------->AHL20(2)            --------->ARR14(2)         <---------------------WRI1 -------->MYB59  <---------AHL20(2)            <---------ARR14(2)       --------->DAG2 -----MYB46(3)   <---------AHL20(1)            <---------MYB52(1)     ---------->DOF2 ---MYB52(1)  --------->AHL20(2)         <-----------GT1 --------->YAB1---------->DOF2        <------ >ATHB12 <---------MYB59<---------bZIP60(2)  <---------MYB46(3)--------->AHL20(2)             -------   gtttggttggaccaaataatataatgatgtggtgaaaagttttttagcggttatgaaaatcaaaataaaaaaaaaaggcggtaagaaaaatggcaatgca  11473300                                                                                                <----                                        <----------DOF2                                         -----                                       <---------ICU4                                           <----                                      <---------YAB1                                           <-----                                   <------ZmHOX2a(2)                                         <-------                                  --------->ARR11(3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)        <---------MYB46(3)        <---------ARR11(3)           <---------MYB46(3)          <---------AHL20(2) ---ZAT14               --------->HSFB2a(2)               <---------TOE1(2)               --------->YAB1 -->ZAT14               <---------HSFB2a(2)          --------->ARR11(3)      --------->ZAT6--------->AHL20(2)   gtagaaatggtggttcaaaaatggttttagaagtgagatcatctttatgctcatttatcttgggtttgttcgggctctaacaccatgtacaattttaatc  11473400                   ------>ZmHOX2a(2) -----ICU4        <------ZmHOX2a(2)                               xxxxxxxxxxxxxxxx>smallRNA(i) ---->ATHB12     --------->AGP1                                  <---------ARR11(3)              ---- ----HAHB4       <---------ARR11(3)                           <---------ALFIN1     ----------->HVH21 ----ATHB12      <---------AGP1       --------->AHL20(2)  --------->At4g35610  <xxxxxxxxxxxxxxxxxxxxx ----GT1         --------->ARR11(3) <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)          -----   atttgaaaataagtggaaagatctatacatttcatatactttatatacttatgttgaattagctccacatcttattggtaatggtttgacagtttgaatt  11473500  Previous    Next  AGI:  At4g21570.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61223.1); contains InterPro domain Protein of unknown function DUF300 (InterPro:IPR005178) Range:  from: 11470895    to: 11472993    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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