Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------AHL20(2)                                                         <---------AHL20(2)                --------->MYB52(1)                                    <----------DOF2      --------->AHL20(2)       --------->ANAC46      <-------TEIL     <---------ZAT2      <-----------GT1         <---------TOE2(3)     --------->MYB46(3)   gcatgaagtccattgtatcatccctagctgttcattcactttgttttacttcatttcatttaaactcttaatgttttaatgtcccagcaaaaccatcgga  11454400                                                                              <-------MYC3                                                                    --------->GLK1(1)                                                  <---------At4g35610         ------->MYC3                                                  --------->At4g35610      <---------ALFIN1                                               --------->ZAT14  <---------TOE2(3)                                               --------->At4g35610  <---------GLK1(1)            <---                                               <---------At4g35610<------ZmHOX2a(1)           <------       ----------->GT1                         <---------ZAT14  <---------TOE1(3) <---------ANAC46 <-   ---------->DOF2                  ----------->GT1  <------ZmHOX2a(1)   ----------->RAV1(1)  <------   agagtcaaagagttacttcagtttggagggttttcagagtgtgattttctgcagaggacattggctaaggaattccaacacatggagtctaggtattttc  11454500                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                         <---------ANAC55(1)                                                                         --------->ANAC55(2) -------DOF2                                                            <-------TEIL   <---------YAB1 -----GT1                                                    <------MYB46(1)           <---------TOE2(3) ----------GT1         --------->DAG2                        <------MYB83<---------ANAC55(2) <------- ---AHL20(2)          ---------->DOF2           XXXXXXXXXXXXXXXXXXXX>MIR397A   ---------->DOF2   ----   tttacatcttcacttcttaaaacataaagtttcttaaaaatgctgcatcatggagcacaacgttggtaaactgatacgtgtaaaaggctatggtagagac  11454600                                                                                         <---------ZAT2                                                                                         --------->At4g35610                                                                                       <---------ZAT14                                                                                       --------->ZAT14                                                             <------------CBF     ---------->DOF2                                                 --------->TOE2(3)      <---------ANAC58 <---------At4g35610                   <---------ANAC58              --------->YAB1         <---------ANAC58--------->ALFIN1 ---ID1            <---------ANAC58            -------->P<---------TOE2(3)--------->AtLEC2       <--- ------>DOF2     ------>NtERF2               --------->MYB46(3)      <---------ZAT14   --------->ZAT18   aaaggtccgataccatggctgccttggcattttgaaatacaacatgaacaaccatatttatggtattggagtttacttgcaaaacaaagtgtgctgagtc  11454700                                        --------->ANAC46      <----------DOF2                                        <---------O2   --------->AHL20(2)                          <----------DOF2         <---------YAB1                         <---------ANAC58      --------->GLK1(2)  ------------>CBF   --------->GLK1(2)     <---------ANAC58     <---------GLK1(2)  <-----------GT1       <---------ANAC58 -------DOF2   <----------DOF2          --------->O2   <---------AHL20(2)              <---------ANAC58   tttataatctggacatactttctcatggctttctctgactagacgtcaaattctgattttaatgctttaacaattttagcttcaagatggcttctcaaat  11454800                                                                                   --------->REM1(1)                        --------->ARR11(3)                              ------->GAMYB                       --------->GLK1(1)                               --------->ANAC46                       <---------GLK1(1)                               --------->ANAC58                      --------->ARR11(3)                    --------->At4g35610   ------>MYB83                      <---------ARR11(3)           ---------->ID1      --------->ANAC58                  ---------->DOF2              <----------DOF2      --------->MYB46(3)                --------->ANAC58      <-----------RAV1(1)   <---------At4g35610   ------>MYB46(1) <----------DOF2--------->ANAC58      <---------MYB46(3)    <-------GAMYB         -------->P   ------   gccctttacaacaatatcaagaaagatatcatgtatgaagttgttgcctctttgccctcttcagttgtcaacaacgcaaacacctacaacaattcccatg  11454900                                          <----------DOF2                                          <---------DAG2                                        ------->TEIL                          ----------->RAV1(1)                        --------->At4g35610                        <---------At4g35610                  <---------ANAC58    <---------ZAT18                  <---------ANAC58    --------->ZAT18=========================HOX2a_HOX2a             <---------TOE1(3)     ---------->DOF2   =====================HOX2a_HOX2a             --------->DAG2     --------->YAB1       ------>ZmHOX2a(2)            <---------YAB1             <---------TOE2(3)  --------->TOE2(3)   <-----------------AGL1      <---------At4g35610         --------->HSFB2a(2)   <<<<<<<<<ARR2     <---------YAB1        <------ZmHOX2a(1)        ----- <----------DOF2 <-------TEIL  <<<<<<<<<ARR1   --------->YAB1      ------>ZmHOX2a(1) <---------WOX13(1) --->O2  <---------HSFB2a(2)--------->MYB46(3)<---------YAB1      --------->TOE2(3)--------->ATHB12   tctctttccttctataaggtacttgcagcaacaatcttaatgcactttattatgatcccatagggcatccttaggaagagattgctgattgctatctcca  11455000                                                                                                -----                                                                                                <----                                                                                        <---------ICU4                                                                                       --------->ICU4                                                                                   --------->ZAT14                                                                                   --------->ZAT18                                                                                   <-------TEIL <----                                          <---------ZAT14                       ---------------------                                          --------->ZAT14                       <------MYB83 <-------                                          --------->ZAT18                       <------MYB46(1) <----                                     <---------ANAC58                          <---------MYB46(3)              --------->LBD16        <---------ANAC58       <---------YAB1     <---------------AtSPL8              ------>ZmHOX2a(1)      <---------ANAC46<----------DOF2      ---------->DOF2    --------    --------->ATHB12   ---------->DOF2    <---------ZAT18 <---------At4g35610 --------->ALFIN1 <----- ----->DOF2 ----------->RAV1(2)  <---------MYB52(1)------->TEIL  <---------ALFIN1  <---------ZAT14 <-   aagtcttcatttgctcctgatatactaaagtctctgtttgcttgtgcagaatgaactttctgatgatacaccttgtcaaagtgggtacactgattacata  11455100           --------->LBD16          <------NtERF2         <---------LBD16 ---->ARR11(3) -----ARR11(3) -------ARR10                  --------->GLK1(1)                      <---------GLK1(1) -->TaNAC69(2)            --------->LBD16                             --------->GLK1(1) --ANAC55(2)          ------>MYB83                                --------->YAB1 -----ARR11(1)        ------>MYB46(1)                            --------->At4g35610           <----- ->ANAC55(2)        --------->AtMYB61                    ----------->GT1                  ----------- ----CCA1(2)      <---------ARR11(3)                   <---------TOE1(3)         --------->YAB1<----- ---------DOF2    --------->ARR11(3)                  --------->MYB52(1)   <---------------AGL15   tcttttcaagtccccgatgagaccttcccagagatttcaaactgtattggcatagctaagggttataagcagaattccaacaatgagaaaaatggttata  11455200                             --------->MYB52(1)                                                     -                             ------>MYB83                                                          <-                             ------>MYB46(1)                                                   <-----                           <---------MYB59                                                     <-----   --------->HSFB2a(2)     <---------MYB46(2)                                                <-------   <---------HSFB2a(2)     <---------MYB111(1)                                      --------->HSFB2a(2)  <---------LBD16        ------->TEIL<---------ALFIN1                --------->ARR14(2)      -------- ----YAB1            --------------->AtSPL8    --------->ATHB12 ----------->GT1     <---------HSFB2a(2) >GT1       <---------MYB52(1)       --------->REM1(1)      <---------REM1(2)     --------->At4g35610 ------GT1 <---------RAP2.6(3)      <---------ZAT14  ---------->ID1  <---------ARR14(2)----------->RAV1(1)   cttctctggaagccgttttgttatctgtacctaatggctacacttgtgttgatttgtctctctacaaggtgaatactcattctcttctgcaacaatggtt  11455300  Previous    Next  AGI:  At4g21530.1    Description:  nucleotide binding. similar to D-erythro-sphingosine kinase/ diacylglycerol kinase [Arabidopsis thaliana] (TAIR:AT4G21540.1); similar to Os02g0785900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048331.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16598.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 11450568    to: 11456019    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g21540.1    Description:  D-erythro-sphingosine kinase/ diacylglycerol kinase. similar to nucleotide binding [Arabidopsis thaliana] (TAIR:AT4G21530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16594.1); contains InterPro domain Diacylglycerol kinase, catalytic region; (InterPro:IPR001206) Range:  from: 11454787    to: 11462618    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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