Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ------>ZmHOX2a(1)           ----------->RAV1(2)        <---------ANAC58                                                                   <---------        <---------ANAC58                                                                  <---------ANAC58    <---------ANAC58                                                                      <---------ANAC58    <---------ANAC58                        ---------->DOF2                              <------NtERF2 <----------DOF2                          --------->ANAC58                          --------->DAG2 ----->ZAT14 --------->LBD16              --------->ANAC46      <---------MYB52(1)---------->DOF2 ------ZAT14<---------LBD16               --------->ANAC58    <---------YAB1  --------->ANAC58 --->At5g28300   <------ZmHOX2a(2)    ------>NtERF2--------->At4g35610        --------->ANAC58   aaactttcttgcttcctggatcaattttgaaacattctgcctccaagaaagacatctcaacattctgctagttaagacacaagacaaaggtggctttagt  11438600                                              <----------DOF2                                             <---------DAG2     --------->ARR14(2)              --------->YAB1       <---------------AtSPL8       <---------ARR14(2)       --------->REM1(1)             --------->ICU4       --------->ZAT14            <---------ANAC58        <---------ZAT2             <---------YAB1       <---------ZAT14            <---------ANAC46        --------->At4g35610           --------------->AGL15  --------->ZAT18<---------ANAC58         --------->MYB46(3)   <-----          ----------------->AGL3 --------->ALFIN1<---------ANAC58     <-------TEIL<---------ANAC58---  <---------AtLEC2  <------ZmHOX2a(1)     <-----------GT1    <---------ANAC58     <---------ANAC58<-- -DOF2   <------NtERF2       <---------YAB1-------->P   <-----------RAV1(1)      ------>NtERF2 ------   ttttgtatggcagccattataaggagggattaagagtgtagtacttacctttcttgcaatgttgcgaataggttcaacaacgctgcgagcttcaacagtt  11438700                                                        --------->TOE1(3)            ----------->GT1                             --------->TOE2(3)       --------->ZAT6                                  ----------->RAV1(2)   <---------MYB52(2)                                <-----------GT1  --------->ANAC46                                --------->CCA1(2)  --------->ANAC55(1)                      <---------HSFB2a(2)  --------->ANAC58                         --------->HSFB2a(2)  --------->ANAC58                         <---------LBD16    --------->TOE2(3) ----ARR14(2)                   ---------->DOF2  --------->ARR11(3) ------>HSFB2a(2)            --------->ANAC58    <---------ARR11(3) -------HSFB2a(2)            --------->ANAC58 <------ZmHOX2a(1)                  ---------->DOF2 --->ARR14(2)              ---------->DOF2<---------ANAC46  ------->TEIL ----------->GT1   ccacaagtaacactaggtaacaagggagtgaaagcaaagtagtttcgaggagatataacctgaacctcataagaagagttattcaaagtcttcaaaaaac  11438800                               <----------DOF2                               <---------DAG2                        --------->At4g35610                     --------->ZAT2                  <---------ANAC58                                              <---------GLK1(1)                  <---------ANAC58                                             <---------ARR14(2)                  <---------ANAC46                                             --------->ARR14(2)               <---------ARR14(2)                                           <---------WOX13(1)               --------->ARR14(2)         --------->LBD16--------->ANAC46<---------YAB1      <-------   <---------ALFIN1  <---------ZAT2       ------>ZmHOX2a(1)    <-----------RAV1(1)           --------   ttgctccagcccatccagttccgagcagcactacttttctcttcctggttttagtttcaacaccattgttgctatatgatggatttgcctcagagtaaac  11438900                                   --------->YAB1                                --------->YAB1                                --------->ATHB12                                <--------ATHB1                                -------->HAHB4                                <--------HAHB4                                                    ---                       --------->ANAC58                                                 --------->YAB1                <---------YAB1  --------->ATHB51     ------>ZmHOX2a(2)                 <---------YAB1           --------->AtMYB61    <---------ICU4      --------->CCA1(2)                 <---------ARR11(3)           <---------ALFIN1    <---------ATHB51     <------ZmHOX2a(2)                 --------->ARR11(3)          --------->MYB46(3)   --------->ICU4      <---------AGP1                   ------->TEIL  ---         ------>NtERF2 --------->ANAC58            <---------ARR11(3)            <---------YAB1   <--       --------->MYB46(3)      --------->AHL20(2)  --------->ARR11(3)         --------->ICU4 -------- --ZAT14<---------ALFIN1       <---------YAB1      --------->AGP1          <---------YAB1    -------- ->ZAT18--------->ANAC46     --------->YAB1   --------->TOE1(2)        <---------AHL20(2)    <-------   tataagtcccccaccactatgaaacaagaaataataattagaacagaacataagatctaaaacagccatctatatttttgattatgaatatcatcagctc  11439000                                     --------->ANAC58                                     ----------->GT1                --------->LBD16                             --------->ARR14(2)                    --------->ANAC46                             ------->TEIL                         <---------LBD16 ------>At4g35610            <---------ARR14(2)                 <---------REM1(2) ------>ZAT14             <---------ANAC46                   <---------ANAC58 -------At4g35610        <---------TOE2(3)                   <---------ANAC58 ->At4g35610            --------->MYB52(1) --------->YAB1<-------GAMYB ->ZAT2        --------->GLK1(1)     --------->ANAC58   <-----------RAV1(1) --At4g35610  <---------GLK1(2) ----------->HVH21    --------->GLK1(2)                      ---------   tgctctcgtaaacacagatttcgatctaacgtatatgacaagtaaacataacaagactctgttgcatacacgggaaaacaaaattttgcgaaggaaaagt  11439100               <---------AHL20(2)            --------------->AGL15            <---------------AGL15      <-------TEIL           <-----------------AGL3    --------->ARR14(2)          <------ZmHOX2a(2)          <---------ARR14(2)          =================================HOX2a_HOX2a            <---------AHL20(2)          ------------>CBF          <------ZmHOX2a(1)            <-----------TBP    <---------ANAC46     --------->ANAC58                        --------->AHL20(2) ----------->TGA1        --------->ANAC58  <-------TEIL    ----------->GT1 ----------->HVH21     ---------->DOF2--------->CCA1(2)--------->ZAT14     ----------->GT1  --------- ->DOF2 --------->At4g35610  ---------->DOF2           <---------ZAT14    <---------------AtSPL8   ctcatgacgcagatcaatttatggcaaaagcaaaaggaggatacgttcagaatacagaacagagtaaatttatagagaagtacaaagtttcaaatagaga  11439200                                                                                              -------                                                   <---------MYB46(3)                    --------->YAB1                                      <---------ZAT14                                    <---------ICU4                                --------->CCA1(2) <---------AtMYB61                     --------->ICU4                             ----------->ARR10 ----------->HVH21                        <---------YAB1                     ------->TEIL <---------------AtSPL8                           --------->YAB1 <--                <---------At4g35610   --------->ZAT14     --------->ATERF1(1)      <------ZmHOX2a(1)     ----------->GT1 --------->ARR14(2)   ----------->HVH21        --------->GLK1(2)  --------->YAB1 -->GT1         --------->At4g35610   --------->ZAT18<---------ANAC46             ----------->GT1 <--   aattcaaacgtgaaatacagatgaatcggcgaagagatggtacactgacctgatggtggagacgacgagaattttggagagagaaggataatcatggaaa  11439300                                    XXXXXXXXXXXXXXXXXXXX>MIR413                                   --------->ATHB51                                   <---------ICU4                                  --------->ICU4                                  <---------YAB1       --------->GLK1(2)        --------->YAB1                                        --------->At4g35610 --->DOF2                   --------->ARR11(3)                                        <---------At4g35610 -------ANAC58              <---------ARR11(3)                                 --------->KAN4(2) -------ANAC58          ---------->DOF2               --------->GLK1(2)    ----------->GT1         <-   gcttgggataatctttcgaagtaggcgaaaggtctcataatttctcttgatgtgcgattcagtctccaagaacgaattggttattctctgcttacataga  11439400                                                       --------->ALFIN1                                                     --------->TGA1a                                                     <---------TGA1a                     ---------->DOF2                 <---------O2              --------->ATHB12                       --------->O2          <---------YAB1              --------->YAB1              --------->ALFIN1              <---------YAB1            <--            --------->GLK1(2)           <---------bZIP60(2)          ----------->TGA1          ======        --------->LBD16                 <---------ANAC46        <------ZmHOX2a(1)              <----- -----ZmHOX2a(2)     ==========================================bZIP_DOF ----------->GT1      --------   gatcgagagccgagaatcatggagaaaggagaagaaagaatgatgtggagaggccaagtgggagaaggagagtgacgataattctgttttgatgctaacc  11439500  Previous    Next  AGI:  At4g21490.1    Description:  NDB3; NADH dehydrogenase. similar to NDB1 (NAD(P)H DEHYDROGENASE B1), NADH dehydrogenase/ disulfide oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G28220.1); similar to NDB4 (NAD(P)H DEHYDROGENASE B4), NADH dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G20800.1); similar to NDB2 (NAD(P)H DEHYDROGENASE B2), disulfide oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G05020.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66469.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16606.1); similar to FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Calcium-binding EF-hand [Medicago truncatula] (GB:ABD32606.1); cont Range:  from: 11436507    to: 11438969    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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