Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <----------DOF2                                 <---------ALFIN1                                --------->MYB46(3)             <---------------AGL15  <---------DAG2                   --------->ICU4               <--       <------NtERF2   --------->ZAT14                    <-------TEIL                            <--      --------->HSFB2a(2)    <---------ETT(1)        --------->HSFB2a(2) <------MYB46(1)       ------      <---------HSFB2a(2)   --------->SPL7           <---------HSFB2a(2) <------MYB83   <---------YAB1     <---------LBD16   <---------ZAT14     --------->AtLEC2--------->YAB1----------->GT1<---------ATHB12   gtcttcgtcgggaaactataaacagaacagtccgaccactttttcatgctaacttctagattcataatgcaatgttggtaaaaatagacaatgaatgaaa  11430700                                                                                             --------                                                                                           <--------P                                                                                           <---------MYB52(1)                                                                                          <-------GAMYB                                                                                         ----------->GT1                                                                                         <---------MYB46(3)                                                                                      <---------ANAC58                                                                                      <---------ANAC46                                                                                   <----------DOF2                                                                                  <---------ANAC58                                                                    --------->MYB52(1)<---------ANAC58                                       <---------AHL20(2)       --------->AHL20(2)<---------ANAC46 --------DOF2                  <--------P                      --------->AHL20(2) <---------ANAC58 -------DAG2                  <-------GAMYB                  --------->YAB1      <---------MYB46(3) ->TEIL            ----------->GT1  <---------ICU4     --------->ZAT6           --------->ALFIN1   ctttttcatgtataaaaaatatggaaacttggggttgataatgaattgttcatgttaagactaaaataaaaaacagaagagggtgcttgtgtggttagtc  11430800                                                            <---------AHL20(2)                                                        <---------MYB52(1)                                                     <---------TOE1(2)                                                    <------NtERF2                                                  <---------ETT(2)                                                  --------->ETT(2)                              -----                                                 --------->SPL7                          ----------->RAV1(2)                                                <-----------HVH21        <---------TOE1(2)    <------                                                <---------MYB52(1)     <---------SPL7    ============  ----------->GT1    --------->ARR11(3)    <-----------GT1  --------->AHL20(2) <-----------GT1<------ ->MYB52(2)          <---------ARR11(3)    --------->MYB52(1)     <---------YAB1       <-----------GT1   tcaattgttaaatcaacaattaagttctccgattaggcgttgaattaaccggtcgcccgtttttaattttcatcgttcgattttcaacttaacctgtcca  11430900                                               <-------GAMYB        <---------DAG2              <-----------TGA1   --------->HSFC1(2)              --------->TGA2(1)   <---------HSFB2a(1)             --------->bZIP60(1)   <---------HSFC1(2)              <---------TGA2(1)   --------->HSFB2a(1)             <---------bZIP60(1)                                             <- ------>RAV1(1)                    --------->ETT(2)                                           ------- ---ZAT18<----------DOF2           <---------ETT(2)       ----------->RAV1(1)                <------- =======RAV             <---------YAB1        <---------MYB46(3)                         --------->At4g35610 ---ETT(2)       <---------MYB59  <-----------STF1       --------->REM1(1)             <---------WOX13(1)   ccagaaggtcccttttgtgcctaattttgatgaaatgtcgtcatttcgtcgttgaagctacaacacaaaatacaaaacgttgtagttagattgctgaatc  11431000                                                                              <---------ARR11(1)                                                        --------->LBD16       ------->TEIL                                                       <---------LBD16        <---------ARR14(2)                                                      <---------LBD16         --------->ARR14(2)                                                    <------ZmHOX2a(1)         --------->GLK1(2)                                                   ----------->HVH21         <---------GLK1(2)                                                   <------MYB83              <---------CCA1(2)                                                 <--------P             --------->ARR14(2)                                                <---------MYB52(1)      --------->GLK1(2)                                             ================================HOX2a_HOX2a                                             ==============HOX2a_HOX2a  <---------ARR14(2)                                             <---------LBD16           <---------GLK1(1)                                             ------>ZmHOX2a(2)        <------ZmHOX2a(1)                                            --------->ARR14(1) <---------YAB1<---------ARR14(1)     <         --------->WRKY18(1)             <---------KAN4(1)     <---------AHL20(2)                   -   <-----------GT1                       --------->HSFB2a(1)   --------->AHL20(2)                   - ---------DOF2                   --------->WOX13(1)<------MYB46(1)  --------->MYB59         <-------- >TEIL  <-----------HVH21      ------------>CBF--------->LBD16<---------AHL20(2)          <---------HSFB2a(2) --GLK1(2)        <-----------HVH21     <---------KAN4(2)     --------->AHL20(2)          --------->HSFB2a(2)   tctttgtaccggtcaaactcggtcataccgagtatcaatccgaatgatccggtaggaccgggattttaattaggaatccgaatctctaaattccagatgc  11431100                                                                                             ------>MYB46(1)                                                                                             ------>MYB83                                                                                       --------->WRKY38(1)                                                                                       --------->WRKY12       --------------->AtSPL8                                                       <---------ANAC46       <---------------AtSPL8                                                      <------NtERF2       <---------------AtSPL3                                                     --------->LBD16      <---------ANAC55(2)                                                         ------>NtERF2      <---------ANAC58                                                            <---------ATERF1(1)      <---------ANAC55(1)                           <---------MYB52(1)           --------->ATERF1(2)      <---------ANAC58                             <----------DOF2               <---------DEAR3(1)      <---------ANAC46                        <---------At4g35610                --------->DEAR3(1)      --------->ANAC55(2)         <---------ICU4  <---------ANAC46               <---------ATERF1(2) ---------DAG2  *TSS  ------>NtERF2           --------->At4g35610               <---------LBD16------ -------->TOE1(3)    --------->DEAR3(1)       <---------ZAT2                  --------->DEAR3(1) <--- -------->TOE2(3)    --------->ANAC46         --------->ZAT2         ------>ZmHOX2a(1)--------->DOF5.7(2) -At4g35610------->TEIL      <---------YAB1  <-----------RAV1(1) <---------SPL7 --------->ATERF1(1)--   taccttatacgtgtacgtcttctccgcccttcttattcatttctactctgctgcgttatttctccgtcgtcctcaactcatcgccggcgtttaccatccg  11431200         <------NtERF2        ------>NtERF2       --------->DEAR3(1)       <---------DEAR3(1)     <-----------HVH21     <---------ATERF1(1)                                                                  <---------ICU4   ------>ZmHOX2a(2)                                                                      --------->YAB1   <-------TEIL                                                                          --------->ICU4  <------ZmHOX2a(2)                                                                <---------ANAC46 --------->AGP1                                                                   <---------ZAT2 <---------ARR14(2)                                                               --------->ZAT2 <---------ARR11(3)        --------->AHL20(2)                                     <---------At4g35610 --------->ARR14(2)        <---------AHL20(2)                                     --------->At4g35610 <---------AGP1    <---------ETT(2)                                        <---------ARR14(2) --->ANAC46   <---------LBD16         --------->TOE2(3)      --------->YAB1--------->ARR14(2) ------MYB52(1)    --------->ETT(2)  ----------->GT1      --------->YAB1   <---------ARR11(3) --------->ARR10--------->LBD16      --------->YAB1    --------->YAB1      --------->GLK1(2)   ctagatccgtcgcctctccggtcgactatttatatggaatcgtaaatttacagacactaataagaatagtttgacaaaatctgtagctggaataatgtcg  11431300                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                  --------->ANAC55(1)                                                                  ----------->GT1               --------->DAG2                                     --------->ANAC46              ---------->DOF2                        --------->TOE1(3)        <---------ANAC58                  ------>ZmHOX2a(2)--------->YAB1              <---------GLK1(2)        <---------ANAC58                --------->ARR11(3) <---------ICU4      --------->TOE2(3)        <---------ANAC46          <---------YAB1     --------->TOE2(3)         --------->TOE1(3)   atgagcaattccttgaaaaagctctcttcttgtgttcttattgatctcgatggtaccttaatcaacacaggtaacttaaaacctcaatagattgtttcaa  11431400                                                                  ----------->HVH21     ----------->GT1                                                                <---------MYB46(3)      <---------ANAC46            <---------ANAC46                                    <------MYB83<---------TOE2(3)--------            <---------ANAC58                 --------->ATHB12   <------MYB46(1)     <---------ANAC58            <---------ANAC58                <-------TEIL    <-----------RAV1(1)     <---------ANAC58     --------->AHL20(2)      <---------TOE2(3)              <---------MYB46(3)<------ZmHOX2a(1)  ----   tttctgtttatatagcttggaattcgaatttgatgtttttttaaaattcattgtagatggtgttgttggtgacattttgaggaaatacttgtgtaaatat  11431500                          --------->YAB1                           <---------YAB1            --------                      <---------ICU4                            <---------YAB1          <---------ANAC58                      -------->ATHB1                  <---------HSFC1(2)                <---------ANAC46                      --------->ATHB12                <---------At4g35610               <---------ANAC58 ->ICU4              <---------YAB1                   --------->HSFC1(2)           ------->TEIL ------->GT1        --------->GLK1(2)                 --------->At4g35610   --------->ARR11(3)   ggtaaacagtgggatggaagagaatcattgaaaatagttggcaaaactccagtagaagctgctactactattgttgaagattatgaacttccttgtaaag  11431600  Previous    Next  AGI:  At4g21460.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18240.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68106.1) Range:  from: 11428521    to: 11430743    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g21470.1    Description:  ATFMN/FHY (RIBOFLAVIN KINASE/FMN HYDROLASE); FMN adenylyltransferase/ riboflavin kinase. similar to GS1 (GLYCEROL-3-PHOSPHATASE 2), hydrolase [Arabidopsis thaliana] (TAIR:AT5G57440.1); similar to GPP1 (GLYCEROL-3-PHOSPHATASE 1), hydrolase [Arabidopsis thaliana] (TAIR:AT4G25840.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78503.1); contains InterPro domain Haloacid dehydrogenase/epoxide hydrolase; (InterPro:IPR005833); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); contains InterPro domain Ribof Range:  from: 11431116    to: 11433333    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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