Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <------MYB83                                                                     <------MYB46(1)                                                               <---------YAB1                                                             <-----------GT1           --------->ZAT6                                   <---------YAB1         <---------DOF5.7(2)                              --------->YAB1       --------->DOF5.7(2)    --------->ANAC46            <---------ICU4       <---------MYB52(1)   <-----------GT1              <---------YAB1 <---------HSFB2a(1)----------->RAV1(1)                  --------->ICU4           ------>ZmHOX2a(1) -ZmHOX2a(1)     --------->HSFB2a(2) --------->ANAC46 <---------YAB1--------->MYB59   agaaccctcgttaactcttctccaacaaattcactaaaccctccattactcttcttcttattattactatttggtaatctcttcctcttctcaacttctc  11411800            ------>ZmHOX2a(1)        ------>ZmHOX2a(1)           --------->TOE2(3)   <-----------ARR10                                          <---------ATHB12         ------>MYB83          <---------ARR14(2)                                       --------->ANAC46         ------>MYB46(1)       --------->ARR14(2)                                      --------->MYB46(3)       --------->AtMYB61      <---------CCA1(2)          --------->ZAT14              --------->ANAC46    --------->ANAC46      ------->GAMYB                  <---------ZAT14        --------->At4g35610   tcttcaacaccatccttatcaaatccaactgcaaatctcctctcttcaacttcatcttcttcactgcttcatccatagcctctgcttcacccatcactct  11411900                                                                                              ------>ZmHOX2a(2)                                                                                             <-------                                                                                             --------                                                                              ------>ZmHOX2a(1)------                                                                              =======================HOX2a_HOX2a                                                                  <---------ALFIN1  ------>ZmHOX2a(1)                                                                ------>NtERF2XXXXXXXXXXXXXXXXXXXX>MIR847                                                      ===============================HOX2a_HOX2a                                                      ==================================HOX2a_HOX2a                                         <---------ANAC58      --------->ANAC58  ------>ZmHOX2a(1)  -                                         <---------ANAC58      --------->RAP2.6(2)  =================HOX2a_HOX2a                                      <----------DOF2 =====================================HOX2a_HOX2a                                    <------------------------ANAC81 --------->bZIP60(2)     <--------                                    <---------At4g35610        --------->ANAC58  ====================HOX2a_HOX2a              --------->LBD16 ------>MYB83            ------>ZmHOX2a(2)   XXXXXXXXXXXXXXXXXXXXX>MIR831         <---------GLK1(1)    ------>MYB46(1)        <---------GLK1(1)   <---------At4g35610<--------  ------>ZmHOX2a(1)         <---------MYB59<---------MYB52(1)  --------->ANAC46 <---------ALFIN1    -   cttcctcttcgatttccccaatctcttagacctaattctgctttcgtttggctcgatctctgaagacgccacttcatctcctcctcctcttcttgatctg  11412000 --At4g35610 ->At4g35610 ----->HVH21                               <----------DOF2 -------->ANAC58                    <---------DAG2<---------ANAC46 -AGP1                   --------->At4g35610  --------->At4g35610           <-----------GT1 -ARR11(3)               <---------At4g35610  <---------At4g35610       <----------DOF2     <-------- -------->ANAC58    <----------DOF2 <----------DOF2               <---------ALFIN1  ---------->DOF2   acaagcttagaagactctgcaactttctgcttacttcgctttaggctttgctgcgagtgatgactctcacacatctttttcccctctaaagctcgtctct  11412100                                                                                   <---------HSFB2a(1)                                                                     --------->HSFB2a(2)          <---------ANAC58                                           <---------HSFC1(1)   ------>NtERF2<-----------HVH21       <-----------HVH21            <---------HSFB2a(2)  --------->DREB2C(2)            ------->GAMYB                ------>NtERF2        --------->HSFB2a(1)  --------->DEAR3(1)            --------->ANAC58             ----------->HVH21     --------->HSFC1(2) --------->MYB46(3)             --------->ANAC58             --------->ANAC46      <---------HSFC1(2) --------->DEAR3(2)      <-------GAMYB  <-----------TGA1     <---------ETT(1)  --------->ANAC58 --------->ORA47(2)     <---------MYB46(3)            <---------ANAC58         --------->ANAC58 -CCA1(2) <---------ANAC58      <---------MYB52(2)    <---------ANAC58  ---------->DOF2   tgcaccgccattgcttaccatcagagcggttgcaacgaaactcgtcagggacgatttcgttctccgacattctcgaaagactcgaaatttctctgaattt  11412200                                                             <-------GAMYB                       <---------LBD16                      <---------ANAC46                 <---------GLK1(2)                          <---------DEAR3(1)            --------->LBD16                         >>>>>>>>>TBF1   <---------ZAT6          <---------LBD16            ------>ZmHOX2a(2) <---------ARR14(2)        --------->GLK1(2)           <---------At4g35610--------->MYB52(1)                 <---------ZAT14        <---------ARR14(2)          --------->At4g35610--------->ARR14(2)     ---------->DOF2       -   tggatgagaaattccggtggaatctctcggagtaagtgatctgaaaccagagaagaagaacggcgttgtagtgatagagagaaagagaagtgtatagaga  11412300                                                                                                 ====                                                                                                 ----                                                                                             <-------                                                                                          --------->TOE1(2)                                                                                          --------->TOE2(2)                                                                                         <---------ANAC58                                                                                         <---------ANAC55(1)                                                                                         --------->ANAC55(2)          --------->DAG2                                                                 <---------ANAC58         --------->DAG2                                                                  <---------ANAC55(2)        ---------->DOF2                                                                  <---------ANAC46   ----------->GT1    <---------AHL20(2)            ----------->GT1         <-----------------AGL1 --------->DOF2     <----------DOF2            ---------->DOF2--------->ALFIN1         <---------DOF5.7(2)   gagaaaggcaaaaaggggaagtcttttatttgcagagagaaggaagtggcaaagttgtaaatatgtggagaacgagagtcttgttttggtaacgtatgat  11412400               ------>ZmHOX2a(2)               ===============================HOX2a_HOX2a              <------ZmHOX2a(2)             --------->GLK1(2)             <---------ARR14(3)             --------->ARR11(3)                                                                   ---             <---------ARR11(3)                                                                   ---             --------->ARR14(3)                                                                  <---             <---------ARR14(2)                        <---------AHL20(2)                     <------             --------->ARR14(2)                        --------->AHL20(2)                <---------ANAC46             <-----------ARR10                     <---------AHL20(2)                    <---------ANAC58            <------ZmHOX2a(1)                 <----------DOF2                  --------->ZAT6 ------- ==================HOX2a_HOX2a         ------>ZmHOX2a(1)                     ----------->RAV1(1) <--- -->ZmHOX2a(2)================================HOX2a_HOX2a                   --------->ANAC46 <------- --YAB1    ----------->ARR10 <---------MYB52(1)   <---------AHL20(2)      <-----------GT1<---------ANAC58   cgcaaatatcgagaggatcttcagtttttcagttacctctcctctggtcttttttatttttttagtttttttttttatacaacactaatttgcttatata  11412500                                                                                        --------->YAB1                                                                                       <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                     <-----------------AGL3                                                                     <-----------------AG       <----                                                                     ----------------->AGL3     -----  <---------MYB46(3)          <----------DOF2                        <-----------------AGL2 <-------- ------>ATHB51                <---------DAG2                         <-----------------AGL1 --------- ------>ATHB12               <---------ANAC58                        ----------------->AGL2--------->AHL20(2) ------AHL20(2)              <---------ANAC58             --------->YAB1              <---------AHL20(2) ---AHL20(1)           --------->AHL20(2)            --------->CCA1(2)<---------------AGL15<---------AHL20(1) -->AHL20(1)           --------->AHL20(1)           <---------ARR11(3)--------------->AGL15<---------AHL20(2) ------YAB1            <---------AHL20(2)     <-----------GT1--------->YAB1     <---------RVE1(1) --- --CCA1(2)            --------->AHL20(2)  <---------AHL20(2)<---------YAB1      <---------CCA1(1)<---   ttattggttgaagaaataaacaaaaaaaattgcttttttagtttttatttactagatatatgatgatagtttctaaatttggatattttttaataaaatt  11412600                                                        <---------ANAC55(2)                                                        --------->ANAC58                                                        --------->ANAC46                                             <-------TEIL  ----------->RAV1(1)                                            --------->ARR14(1)                                           --------->ARR14(2)                                           --------->ARR11(1)                                         ----------->ARR10<----------ID1                                      --------->ANAC46  --------->ANAC55(2)                              --------->AHL20(1)  --------->AHL20(1)                              <---------AHL20(2)  <---------ARR11(3) -----AHL20(2)                --------->AHL20(2)  <---------AHL20(1) ---->AHL20(2)               --------->AHL20(2)   --------->AHL20(2) -AHL20(2)              <---------AHL20(2) <---------ARR14(2)     --------->AHL20(2)         -------- >AHL20(2)             --------->AHL20(2)<---------TOE2(2)--------->ANAC46                <----------DOF2 ------->DOF2      --------->AHL20(2) --------->ANAC58  --------->ANAC58               --------->ARR11(3) ------AHL20(2)  --------->TOE2(3)    --------->ANAC58<-----------GT1                  <---------ARR11(3)   aaaaggtatgtctagtttacataaatttaaaattaattgcacgtagattcgatatattacgcgacaaaaaaaataactcaaatttcataaatctttagtt  11412700  Previous    Next  AGI:  At4g21430.1    Description:  B160; transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT1G11950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21257.1); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); contains InterPro domain WRC (InterPro:IPR014977); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 11407815    to: 11412170    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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