Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                       ------>ZmHOX2a(1)         --------------->AtSPL8          ----                            --------->LBD16                     <---------ANAC58                -----                           <---------ANAC46               <-------TEIL                         <-----                           <---------ANAC58       --------->ANAC58                             ------               <---------MYB52(1)     --------------->AGL15     <---------ANAC46             <------- --------->TOE2(3) <----------DOF2   ----------------->AGL1     <---------ANAC58             -------- ----->DOF2  --------->MYB52(2) <---------GLK1(2) --------->ANAC58                           <------NtERF2 --->YAB1   <-------TEIL   <---------ANAC58     --------->MYB52(1)                       <-----------HVH21   aagccttagtcgggttcgtttcttttcttccgtagattgtcctgtttgagtaacgaaacatacagtgcgtgtaccatacaacagcttgttttgtcagcgg  11404700      <------MYB83      <------MYB46(1)   <---------ANAC46                              <---------CCA1(2)   <---------ANAC58   --------->At4g35610      <---------ICU4   <---------ANAC58   --------->ZAT2           --------->YAB1 ------ARR14(2)       <---------At4g35610     <---------ATHB12 ----->ARR14(2)       <---------ZAT2  ----------->HVH21                                             - ->NtERF2       <---------ANAC58    --------->ZAT2                                                  < ----ZAT18<---------AtMYB61         <---------ZAT2   <----------DOF2 <---------ZAT14              <-- ----->HVH21    <---------ANAC58    ----------->RAV1(2)              <---------REM1(2)      <-------- --At4g35610    <---------ANAC46    <---------At4g35610              --------->ZAT14     --------->ARR11(3) ->At4g35610   --------->MYB52(2)   --------->At4g35610  <-----------GT1--------->ANAC46 <---------ARR11(3)   acactgcttggtgaggtttcttgcagctgtctgaatacagctgacacaatcatctcttttgacttctcttctacacagaccaattgcataagctctttct  11404800                                                                                      --------->LBD16                                                                                      ------>NtERF2                                                                                     <---------LBD16                                                                                     --------->ANAC46                                                                                     --------->LBD16                                                                                     <---------ETT(1)                                                                                    <---------LBD16                                                                                 <---------GLK1(1)                                                                                 --------->GLK1(2)                            --------->ANAC46                              <-------GAMYB<------NtERF2           --------->LBD16  --------->ANAC58                             <---------MYB46(3)          <---------HSFB2a(2)                                            <---------DEAR3(2) -------->At4g35610         --------->ANAC58                   <------ZmHOX2a(1) --------->GLK1(1) ---------At4g35610     --------->HSFB2a(2)           <------ZmHOX2a(1) <---------DEAR3(1)---------->DOF2 ---------RAV1(2)       <---------HSFB2a(2)     <---------ANAC58        <---------RAP2.6(2)--------->DAG2 --DOF2   --------->HSFB2a(2)                   <---------ANAC58<----------ID1  <---------GLK1(2)   ccagatgagtctccagaagagaggttgtagaagccataagcttgggatttgagtgaggagagggaggagacaaggcggttgagattcccggcaaaagtgc  11404900                                                                   ---------->DOF2                                                            ----------->RAV1(2)                                                           -------->P                               -      ----------->HVH21                  <------ZmHOX2a(2) ------->TEIL                             -      <---------MYB52(1)         <---------GLK1(1)     --------->GLK1(2)                            -     --------->LBD16        --------->At4g35610      <------ZmHOX2a(1)    --------->ANAC58    <------ZmHOX2a(1)    <---------ANAC46<------ZmHOX2a(2)    ===================HOX2a_HOX2a   --------->ANAC58<---------MYB52(1)   tgttcgccgtgaagttgccacgatcaacacagttgaaatctggatcaaactcataggaatctacctgagcaaaggcatgaaatggagcaagcgttaggaa  11405000                                                                         >>>>>>>>>>>>>>>>>LFY                                                                         ------>MYB83             ---                                                                         --------->MYB52(1)<---------                                                                         -------->P        ----------             <---------ARR11(3)                                          ------>MYB46(1)   <---------   ---------->DOF2                                                      --------->ANAC46  <---------- -------->ANAC46                  ---------->DOF2                   --------->GLK1(1)     <---------- -------->ANAC58                --------->AtLEC2                   *TSS--------->MYB46(3) <---------- -------->ANAC58    ----------->HVH21         <----------DOF2   --------->YAB1       --------->ICU4--   acaagcaaagaagaagataactctgacatgttccatgaaagcttgaagctttttttctctaatctatgagaaacccaccagtgtgtaatgagtctttata  11405100           <---------MYB59          <xxxxxxxxxxxxxxxxxxxsmallRNA(l2)       --------->ETT(2)       <---------ETT(2) -------->GT1                       <---------MYB52(1) ------AGL15                      <---------ANAC46         --------->At4g35610 ----->AGL15                      <---------ANAC58         <---------At4g35610 -DOF2--------->DDF1              <---------ANAC58       --------->MYB46(3)                     <---- -------AGL2         --------->TOE1(3)                --------->ZAT18                        -------- -------AGL3 ------>MYB83     --------->DAG2        --------->At4g35610                      -------- -------AGL1 ------>MYB46(1) ---------->DOF2   <-----------GT1 ---------->DOF2<---------ANAC58  ----- ------->At5g28300   --------->TOE2(3)     <----------DOF2--------->DEAR3(1)  <---------ANAC58 <-----   tggtaaatgtcgacctaatttgaccttaaaaaaaagccgtgtgttctttaaactagctcacagccgaaagaacacaagttgctgatcaaaaacaattata  11405200                                                                                               <-----                                                        --------->YAB1                         <-----                                                     <---------AtLEC2                         -------                                                   ------>ZmHOX2a(1)                          <------      --------->MYB52(1)                      <------MYB83<---------YAB1                      <------ -----AHL20(2)                                <------MYB46(1)                    <---------AHL20(2) ->AHL20(2)                                   <---------ANAC58                --------->AHL20(2) ->YAB1 --------->MYB46(3)                    <---------ANAC58       <---------ICU4           ------- ---->AHL20(2)         --------->ZAT18       --------->MYB59       <---------AHL20(2)        <------- ----YAB1------->GAMYB <---------ZAT14       <---------MYB46(3)  <---------AHL20(2)       <------ZmHOX2a(1)   aatttcagtaacagacagacacaagtggacagccattgtaagcttgttgggtcctgcatgatgatatataaaaatttcaatataaaaatttaggagttgg  11405300                    ----------->GT1                  <---------ANAC46                  --------->ALFIN1                ------->GAMYB             <---------DOF5.7(2)            <---------WRKY45         --------->At4g35610  --------->MYB46(3)--------->ALFIN1  <---------MYB52(2)<---------ANAC46 -MYB83 --------->MYB59 -MYB46(1)  <---------WRKY12                             --------->AHL20(2) -->MYB111(1)--------->MYB52(1)                         --------->AHL20(2) ---MYB46(3)<---------WRKY38(1)               --------->ANAC58                                <------ZmHOX2a(1) ---AtMYB61--------->WRKY18(1)                --------->ANAC58                              --------- -->ALFIN1<-----------HVH21                   --------->ANAC46                             --------->HSFB2a(2) -P  --------->GLK1(2)          ----------->GT1         <---------AHL20(2)        <----------DOF2   tgcaacgaatcaggtcaacggtgtgtgaaataagaagttataagttacaagaaaacatttaaaataagtttatatttctcacttcttttctctccaggac  11405400                                                                   <-----------GT1                                                                  --------->AHL20(2)                                                            ----------->GT1                                                     <---------------AGL15                                                     --------------->AGL15                             ------>MYB83           ----------------->AGL1                             ------>MYB46(1)        <---------------AGL15                             -------->P             --------------->AGL15                           ------->GAMYB           <-----------------AGL3                          --------->MYB46(3)       ----------------->AGL2                      --------->DOF5.7(2)          <-----------------AG                        <-----                     --------->TOE1(3)             ----------------->AGL3            ------>ZmHOX2a(1)                     --------->TOE2(3)             ----------------->AGL1       <---------GLK1(1) --------->YAB1      <----------DOF2               <-----------------AGL1       --------->GLK1(1) >LBD16  ---------->DOF2<-----------GT1            <-----------------AGL2     <------ZmHOX2a(1)<-----   caataagaactcaaagtctgaaactttaaccaactagaaactaaaactaatcttccattaatgggaaataaactacttaaggacatcctagagactcctt  11405500                                                                            ------>ZmHOX2a(2)                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                          <---------ARR11(3)                                                                          --------->ARR11(3)                                                                          <---------AGP1                                                                     <---------ANAC58                                                             ------>ZmHOX2a(2)                                                           <---------ARR11(3)                                                           <---------ARR14(3)                                                           <---------ARR14(2)                                                 --------->ARR14(2)  <---------ANAC46                                                 <---------ARR14(2)  <---------ANAC58                                              <---------ANAC46<----------DOF2                 <---------At4g35610         <-------TEIL  --------->ARR14(2)                 --------->At4g35610         <---------LBD16<---------RVE1(1)     <-----------GT1                        --------->ALFIN1<------ZmHOX2a(2)   <-----------GT1 <----------DOF2        <---------ANAC58 <---------AGP1<---------CCA1(2)          - ----DAG2       ------>ZmHOX2a(1)         <---------ANAC58 --------->ARR14(3)                       < -----DOF2    ----------->RAV1(2)   --------->ICU4         --------->ARR11(3)                      <-   ttttttttcacatccctcctgctgtatttgaatttatacttatgaggtgcggattgtggaagatctttatgtcttggatcttactcgctgaatgagacct  11405600  Previous    Next  AGI:  At4g21410.1    Description:  protein kinase family protein. Identical to Cysteine-rich receptor-like protein kinase 29 precursor (CRK29) [Arabidopsis Thaliana] (GB:Q8S9L6;GB:O65406); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G21400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22277.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 11402325    to: 11405067    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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