Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <------NtERF2                                                                 <---------HSFB2a(2)                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                          --------->GLK1(2)                                                         --------->RVE1(1)                                                      --------->DAG2                                                     ---------->DOF2                                          ===============================RAV         ---------->DOF2                  --------->At4g35610    --------->HSFB2a(2)        <---------MYB52(1)                ----------->RAV1(2)   --------->ETT(1)   --------->GLK1(2)                      <---------At4g35610   <---------ANAC46               ------   --------->ARR14(2)         ------>NtERF2    ----------->GT1<-----------HVH21    ==================   ------->TEIL              <---------ETT(1)--------->At4g35610<---------LBD16    ----------->RAV1(1)   <---------ARR14(2)      ------>ZmHOX2a(2) <---------LBD16 <-----------RAV1(1) ------>NtERF2 ------ ------->HVH21    <----------DOF2<---------MYB59--------->At5g28300  --------->GLK1(1)         <-----   tgacgaatctgttaagccctcttttgtgatcccgacccaatttcatctgcggtaataaagtatctgtcgggaaatcgaaactctgccacaaaaactcatc  11386700                                                                         <---------ZAT18                                                                         --------->ZAT14                                                                        --------->DEAR3(1)                                                                       --------->ANAC46                                                                      <---------At5g28300                                                                   ------>ZmHOX2a(2)             <---                                                                  <------ZmHOX2a(2)             -----                                                                 --------->ARR11(3)        <---------WRKY18(1)                                                                 --------->ARR14(2)       --------->WRKY38(1)                                                                 <---------ARR11(3)       --------->WRKY45                                                                 <---------ARR14(3) <---------GLK1(2)                                                                 <---------ARR14(2) --------->ARR14(2)                                                                 <---------AGP1     <---------ARR14(2)    <---------WOX13(1)                                           <-----------ARR10 <---------At4g35610  --------->ATHB12                                       ----------->RAV1(1)      ----------->ARR10-- <-------TEIL                                            <---------ALFIN1--------->ABI4(1)--------->WRKY12 ----->RAV1(2)                                           --------->AtMYB61     <-----------HVH21----- ======RAV                                              --------->MYB46(3) ----------->RAV1(1)<------ --->At4g35610                                      ------>NtERF2--------->ARR14(3)--------->At4g35610 ----At4g35610                   >>>>>>>>>>>>>>>>>LFY  ------>NtERF2----------->HVH21 <-------TEIL --   tgattcattgattttggagccccttagaacaaaattgccattgtcaagaagctctgccaccacagaagatctcaccgcaccagtcagattcgttgaccaa  11386800       --------->YAB1     <---------ARR14(2)  <---------ANAC58  <---------ANAC58  --------->ANAC55(2)  <---------ANAC55(2) <-------TEIL                                      --------->ARR14(2) ------ATHB12                                      <---------ARR14(2) ->MYB83                                          <------ZmHOX2a(1)         --------->ALFIN1 ------->TOE2(2)                           --------->GLK1(2)              <---------ANAC58--------->ANAC58 ->MYB46(1)                               <---------ARR11(3)              <---------ANAC58-------->P ---MYB59                        <---------YAB1 <---------TOE2(3)        <------ZmHOX2a(1)--------->ANAC58 ------->TOE1(2)    <------ZmHOX2a(1)     --------->ARR11(3) <------ZmHOX2a(1)<-----------------AGL1<   acatgcgtatcagaattatcgaggatgacaaggttagcattggagattttgaggattccaataggattagagagaggagtgtctctattggcaacccata  11386900                             <---------ARR14(2)                             --------->ARR14(2)                            ------>MYB46(1)                            ------>MYB83                 --------->GLK1(2)                          <---------MYB59               <---------ARR14(2)                    --------------->AtSPL8       --------->ANAC46                   <---------ANAC58         --------->MYB46(3)                       ----------->RAV1(1)              <---------GLK1(2)             <---------MYB52(2)          <---------ZAT2    <------ZmHOX2a(1)              <---------ARR11(3)           ------>MYB46(1)              --------->ZAT2 <-----------RAV1(2)              --------->ARR11(3)           ------>MYB83 --------->ARR14(2)          --------->AtMYB61             <---------RVE1(1)           <---------MYB111(1)           ------>MYB83--------->MYB46(3)  <---------GLK1(2)<---------ANAC46--------->ANAC58     <---------GLK1(2)        --------->ANAC46 ---------TOE2(2)  <---------ANAC58--------->ANAC58   <---------ATHB12 ------>MYB46(1) ==============   cataggttctctgagagattttcttgtaccaaatcccaaggtaccaactatccccaaggattctgaagaaaccaagctcgaagacaccaccaggagacac  11387000                                        ---------->DOF2                                  --------->At4g35610                                  --------->ZAT2                   <-----------HVH21----------->HVH21          <---------ANAC58 --------->GLK1(2)          <---------ANAC46<---------GLK1(2)          <---------ANAC58<---------ARR14(2)                   --------->ARR11(3)        ---------->DOF2     <-----------RAV1(1)  --------->ARR14(2)   ----------->HVH21<------ZmHOX2a(2)    >>>>>>>>>TBF1<-- ================RAV  >>>>>>>GRF7 <---------At4g35610         <---------GLK1(1)   -------------------   aatggttttgttgcttgagattgtcagggattctgtagctgacaaagtattgacagagatagagagatcagggaacagaattaagaagaagaaaaggaaa  11387100                                  <-----------GT1             --------->AtMYB61                           ----------->GT1                    <---------ALFIN1                   <---       <---------REM1(1)   <------MYB83                    --------->ANAC46                  <-------       --------->ALFIN1    <------MYB46(1)                 <---------ALFIN1                 <-------- --------ID1--------->ICU4--------->MYB59  <---------CCA1(2) --------->MYB46(3)        <----------DOF2 ----->ANAC81             --------->MYB46(2)        ------>ZmHOX2a(2)   <-----------RAV1(1) <--------   acgaagaaggtgtaagaatggtgtttgtttggtaattcacctctcatctctcgatctctctccaccactctcatatgttgttcattttccttttgctttc  11387200                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                       --------->ANAC58                                                                     <---------ALFIN1     <-----------GT1                                               <---------ALFIN1            ------   <---------AHL20(2)                                             --------->MYB46(3)           <----- <-----------TBP             <---------TOE2(3)          --------->AHL20(2)                     ------ -------DOF2                 <---------TOE1(3)          <---------AHL20(2) ---------->DOF2     <----- ---DOF2               <---------AHL20(2)       ------->TEIL    <-----------GT1     <---------ZAT6 -ANAC58               --------->AHL20(2)    <---------ATHB12  <-----------GT1      ----------->GT1 -ANAC58       <-----------GT1       <---------MYB59  <-----------TBP--------->ANAC46         -------   tttatttatacgatttttcacatatttatttcaggtttatctaacccatgaatcttatttatattttacccacacgacaaagagtagtgttattccacgt  11387300                                                                                     <---------AHL20(2)                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                          <---------ANAC58                                                    <---------WRKY38(1)   <---------ANAC46                                                    <---------WRKY45 --------->ARR14(2)                       <---------YAB1               <---------WRKY12 <-----------ARR10                      <---------AHL20(2)      <---------AtLEC2       --------->ARR11(3)         -----                      --------->AHL20(2)<---------DAG2               <---------ARR14(2)      --------     <---------DAG2  --------->AHL20(2) <----------DOF2        --------->HSFB2a(2)  --------->AHL20(1)     <----------DOF2 --------->YAB1   ------>MYB46(1)          <---------HSFB2a(2)  <---------AHL20(1) ->MYC2           --------->WOX13(1)  ------>MYB83 <<<<<<<<<<WRKY11  --------->GLK1(2)       -------- --MYC2         ------------>CBF    ------->GAMYB  <<<<<<<<<<WRKY6   <---------ARR11(3)      -------- ->MYC3        <----------DOF2     --------->MYB46(3)       <-----------GT1        --------->AHL20(2) --MYC3  <-----------GT1           <---------MYB55(2) ------------>CBF    <---------ANAC58   -------- -->ANAC46<-----------GT1         --------->ANAC46 --------->WRKY18(1) --------->TOE2(2)<-----------GT1   tccatgactttttatcgcttcaattaaaattacttcaaccaacttttttcatggtcaacaatttaccagaaaatctacgtgtgaaattaatttccatgca  11387400             <---------ZAT14      ------->PIF5      <-------MYC2                                           ----------->HVH21      <-------PIF4                                         --------->TGA1a      ------->PIF4                                         --------->ANAC46      ------->MYC3                                 ==================bZIP_DOF      ------->MYC2                                 ---------->DOF2      <-------PIF5                               --------->ANAC58 --------->ANAC46      <-------MYC4      --------->ARR11(3)       --------->ANAC58 --------->ANAC55(1)      <-------MYC3      <---------ARR11(3)       --------->ANAC46 --------->ANAC58             ------ ------>RAV1(1)      --------->AHL20(2)         --------->LBD16   --------->ANAC58       <-------TEIL ->ANAC58    <---------ZAT18                ---------->ARF1--------->O2                <-------PIF5 ->AtLEC2    --------->ZAT14<-------TEIL    --------->PCF2 --------->bZIP60(2)         ------->PIF5 ->ANAC58  <---------At4g35610             <-----------HVH21<-----------HVH21     --------->ANAC58 ->ANAC46  --------->At4g35610        <---------YAB1     <---------ALFIN1         --------->ANAC58   acatagcacatgcagttcaccaagtatatattcatccattatccttgtcccacgaaagcccacatcacacggtatcgttctcgcatgcaagtgcatcctt  11387500                                                          ----------->HVH21                                                        <---------ANAC58                                                        <---------ANAC58                                                    --------->CCA1(2)                                                   <---------ARR14(2)                                                   --------->ARR14(2)                                <XXXXXXXXXXXXXXXXXXXXMIR774                                     -----      --------->YAB1     <---------GLK1(2)         --------->ARR11(3)                      --------->AHL20(2) <-------TEIL         --------->HSFB2a(2)          <---------ARR11(3) ------>NtERF2  --------->AHL20(2) >ZmHOX2a(1)          <---------HSFB2a(2)    --------->YAB1   <----------DOF2        <---------AHL20(2)   cgatacattgaaaatgttagccttctagattatggccatatgtgtaattagaagatttgtgtgactttgttcggccattttctatattaaaaaaaaaata  11387600  Previous    Next  AGI:  At4g21370.1    Description:  S-locus protein kinase, putative. similar to ARK1 (A. THALIANA RECEPTOR KINASE I), kinase [Arabidopsis thaliana] (TAIR:AT1G65790.1); similar to ARK3 (Arabidopsis Receptor Kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT4G21380.1); similar to ARK2 (Arabidopsis Receptor Kinase 2), kinase [Arabidopsis thaliana] (TAIR:AT1G65800.1); similar to S receptor kinase SRK37 [Arabidopsis lyrata] (GB:ABF71379.1); similar to SRKa [Arabidopsis lyrata] (GB:BAB40986.1); similar to S receptor kinase SRK04 [Arabidopsis halleri] (GB:ABF71368.1); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Serine/threonine protein kinase; (I Range:  from: 11383895    to: 11387147    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version