Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------------->AGL15                                         <---------------AGL15                                        ----------------->AGL1                                       ------->TEIL                                   <---------------AtSPL8    <-----------RAV1(2)            <---------------AtSPL3                         <---------AHL20(2) ----->GT1                         --------------->AtSPL3                         --------->AHL20(1) --------->ANAC81                  --------------->AtSPL8                         --------->AHL20(2)   taaaacacaggggcaattttgtcaattcaaatacttggaagtacctattcttgtaagcccaatagacaaatgcccaatatcaaattttttgtcaaataag  11375000                                                                                               <-----                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                      --------->ANAC58                               --------->TOE2(3)                                      <---------ANAC55(2)                            <-----------GT1                                           --------->ANAC55(1)                      <---------YAB1              >>>>>>>>>>ABI3                      --------->ANAC55(2)         --------->ZAT6   --------->YAB1          >>>>>>>>>>FUS3               --------->TOE2(3)       <-----------GT1<---------AHL20(2)       <---------AtLEC2          ----------------------->TaNAC69(2)     <---------AHL20(2)  <---------YAB1   --------->ARR14(2)           <----------DOF2--------->ANAC46    --------->YAB1    --------->AHL20(2)  <---------ARR14(2)  --------------->AtSPL8  --------->ANAC58 ------>ZmHOX2a(1)<---------ALFIN1--------->REM1(1)         <---------MYB52(1)--------->ANAC46 <-----   ttcctattttaacaatagccccatattattataccttcatcacatatatgcatgcattaatcgttttgtacaacttttaaacgtaaacacgtaagcactt  11375100                                                              --------->TOE2(3)                                                             --------->ANAC46                                                             <---------ANAC46--------->ANAC55(2)             --------->ANAC46                                <---------ANAC55(2)       <---------ANAC46                                      --------->ANAC55(2)   <----------DOF2 <---------YAB1                                             <---------TOE2(3)<---------ANAC55(2) -----DOF2<---------ARR14(2)            --------->ATHB12<----------DOF2      --------->ANAC46 ----DAG2 --------->ARR14(2) <----------DOF2         <---------YAB1          --------->ANAC55(1)   tttatgtttgtgtatacacaatatttatgtgcttttgtctattcattgttttgttattcttttacgtaaacaaatgaacacataacttttatgtgttcga  11375200              --------------->AtSPL8          <----------DOF2                                                                           -        --------->ZAT2                                                                      ---------        <---------ZAT2                                                                  --------->GLK1(2)   --------->ZAT18                ------->TEIL                                        <---------KAN4(1)   <---------ZAT18            --------------->AtSPL8       ----------->RAV1(1)        --------->KAN4(1)   --------->ZAT14      ------->TEIL       <---------AHL20(2)                        <---------KAN4(2)   <---------ZAT14     <---------CCA1(2)   --------->AHL20(2)                  <---------SPL7  ------   ttttgtgcacagctttgttgtacttgtatctatgtgtacctatatttaaacacattacttccaacatatataaaacatcacagtacgaataatctaaccg  11375300                           --------->YAB1                         --------->ARR11(3)                    --------->ANAC58                    --------->ANAC58                --------->ANAC58               <----------DOF2                --------->ANAC46              <---------ANAC46                        <---------AHL20(1)                --------->ANAC55(2)           <---------ANAC58             *TSS       --------->ARR11(3) --------->DAG2 --------->ANAC55(1)    <----------DOF2                    --------->ANAC46 --------->DOF2 --------->ANAC58     <---------At4g35610           <---------------AtSPL8         xxx >MYB52(1)     <---------LBD16       --------->At4g35610    <-----------RAV1(1)    ----------->GT1XXX ->GAMYB --------->AHL20(2)<---------ICU4     <---------ANAC58     --------------->AtSPL8         xxx   aaaaaagtcgattaattcacgcaagaaaatcatgaagtctgctgttttgcgtttgggttcttatgttgtcatgtacacataaaactagtatattgccttg  11375400             ---------->DOF2 --------->ARR14(2)      <-----------GT1            <------ZmHOX2a(1)<---------ARR14(2) ------>ZmHOX2a(1)  ----------->GT1 --------->CCA1(2)             <XXXXXXXXXXXXXXXXXXXXMIR867                  <------- xxxxxxxxxxxxxxxxx>smallRNA(i2)                --------->TOE2(3)       --------->AHL20(2)    <------- XXXXXXXXXXXXXXXXX>MIR867   <---------CCA1(2)---------->ID1           --------->ICU4   <------------- xxxxxxxxxxxxxxxxx>smallRNA(fl3)            <-----------GT1    ---------->DOF2   <-------------------   aacatggtttattaggaaagacatgagaacatatctgaacatagtttttccttatatacaatgttcaaagtaatgaattagttttattttgtttttcttg  11375500                                      <-----------GT1                           --------->MYB46(3)                                   --------->ATHB51                         --------->LBD16  <-------      ----------->GT1              <---------ICU4                          ----------->GT1   -------- --------->YAB1                   <---------YAB1                           <---------ANAC55(2) --ANAC58                    <---------bZIP60(1)                           --------->ANAC46 <-------- --ANAC58       <-----------GT1   --------->ICU4     --------->YAB1        --------->ANAC55(2) -----------ANAC81        <---------YAB1  <----------DOF2           --------->YAB1     <------------- -----ANAC81 --------->YAB1  --------->bZIP60(1)<----------DOF2     <-----------GT1   <--------------   ttttcatattgtttaaaataacaaacttatgacttcattatttccttttactttgtcataacattgtttattacaatccgtaacaatcgctatttctgga  11375600                                                                              --------->MYB52(1)                    <---------YAB1                                     <---------ICU4                  --------->YAB1                                       -------->HAHB4     --------->ATHB12                     ------->GAMYB               --------->ICU4 --HSFB2a(2)     <---------YAB1          ----------->GT1              <---------ATHB51 ->HSFB2a(2)  --------->ICU4        --------->YAB1                 ------>ZmHOX2a(1) -LBD16<---------WOX13(1)          <---------YAB1    ---------->DOF2<---------ICU4 --AGL15   <-----------GT1    <---------ZAT6     ---------->DOF2   --------->ICU4                   < ---AGL3<---------MYB46(3)   XXXXXXXXXXXXXXXXXXXX>MIR3932A/B      <---------MYB59                   -   tagcaattgattgttactgattataaaaaacagtgttatgacaacgaaaaaaaaagaaagaatgaagtcctaattatgcccatcggcatttagacgaagt  11375700                                                                                                  ---                                                                                                  ---                                                                                                 ----                                               <---------ANAC58                                  ----                                         --------->AHL20(1)                            --------->YAB1                                         <---------AHL20(1)                           <---------AHL20(2)                                         <---------AHL20(2)                    ----------->GT1   ----                                         --------->AHL20(2)               <---------ICU4        <----                                        --------->AHL20(2)                --------->ATHB51---------->DOF2                                        <---------AHL20(2)                <---------AHL20(2)<--------                                     <---------ICU4                       --------->AHL20(2)<--------          <---------DAG2            <---------YAB1                       <---------AHL20(1) ---------          <----------DOF2           --------->ICU4    <---------TOE2(3)  <---------AHL20(2) <--------   --------->ANAC46               --------->YAB1 --------->AtLEC2        --------->AHL20(2) --------- ---------ARR14(2)         --------->MYB52(1)  <---------ANAC58    ----------->GT1   --------->AHL20(2) -------->ARR14(2)       <---------MYB52(2)  --------->ARR11(3)  <---------ANAC46<---------MYB52(1)   agtatacgtagactttatgtttttcaaactaacttaacataattaaatttcttgcaaaggttagattgtttgtaaattatttcgttatataataaaggta  11375800           --------->YAB1           -------->HAHB4          --------->ICU4       <---------AHL20(2)    <---------AHL20(1)    --------->AHL20(1) ------>TOE1(3) ------>TOE2(3) ----->ANAC58 ----->ANAC58 ------->GT1                                                                                       <- ---TEIL--------->YAB1                        <---------ICU4                                       <- -TOE2(3) <---------YAB1              <---------ARR11(3)                                    --------- -------AtSPL3                        --------->ARR11(3)                                  --------->AHL20(2) ------>AtSPL3             <----------DOF2------>ZmHOX2a(1)                              --------->YAB1 -------AtSPL8        <-----------GT1--------->CCA1(1)                                  --------->AHL20(2) ------>AtSPL8   <---------DAG2      --------->RVE1(1)                         --------->DOF5.7(2) <-   cgttaatatataatgatcaatttttgactctttcgctaaatatcctaatatttatgtgaaatttcaaaactataccagaccgtttacaaaataaaaatat  11375900  Previous    Next  AGI:  At4g21362.1    Description:  MIR867a; miRNA Range:  from: 11375375    to: 11375492    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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