Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->TOE1(2)                           --------->LBD16                   <---------TOE2(3)                             ------>NtERF2           ----------->GT1                           <---------MYB46(3)        --------->MYB52(1)                          --------->ALFIN1      --------->ANAC58          <---------ZAT14    --------->LBD16       --------->ALFIN1      --------->ANAC58          <---------ZAT18   <---------ANAC58     --------->ALFIN1 -----------HVH21  <---------TOE1(3)              <---------ANAC46     <---------ANAC46 ------->ANAC46   --------->MYB52(1)     --------->ZAT14       <---------LBD16                     <- ------At5g28300<---------MYB52(2)       <---------ZAT14     --------->DEAR3(1)    <---------MYB46(3) ----->HVH21--------->At5g28300 --------->ZAT14   <---------ANAC58   <---------ANAC46            ----   accgtcacaagaacggtgactaacgttggacctgtggactcagtttacagagccgtggtcgagcctccgcgaggtgtggagattgttgttgaaccagaga  11349500                                                <---------ANAC58                                                <---------ANAC58                                                <---------ANAC46    --------->ZAT14                       <---------TOE1(3)    <---------ZAT14                       <---------TOE2(3)   <---------ZAT6                   <---------TOE2(3)                           <----------DOF2 --------ZAT14                      <---------TOE1(3)              --------->ZAT6    <--------P     - ----->GLK1(2)    --------->ANAC46 ---------->DOF2      --------->YAB1   <------------------------ANAC81   ctctagtgttctgttcgaacacgaagaaacttgggtttaaagttagggtttcgtcgagtcataagagtaacactggttttttctttggtagtttcacttg  11349600                                                                          ------------>CBF                                                                          ------>ZmHOX2a(1)                                           <---------ANAC58              --------->TOE2(3)                                           <---------ANAC58          <---------ARR14(2)                                           <---------ANAC46          --------->KAN4(2)                                        --------->ARR14(2)           <---------GLK1(2)                                        <---------GLK1(2)           <---------HSFB2a(1)          --------->ANAC58              <---------ARR14(2)          <---------HSFC1(2)          <----          --------->ANAC58 <----------DOF2<-------TEIL              --------->HSFB2a(1) <------------CBF --------->ATHB12   <---------YAB1     <------ZmHOX2a(1)       --------->YAB1         --------->AHL20(2) ---------->HVH21 <-----------GT1     --------->ICU4 ------->TEIL   --------->HSFC1(2)<---------AHL20(2)   gactgatgggactcgaaatgttaccattcctttgtctgtaaggattcgtgttttgaacccttgaataagaagattcctcaattcgtcataaattgttttt  11349700                                                                                          --------->GLK1(2)                                                                                          --------->ARR14(1)                                                                                         --------->ARR11(3)                                                                                         --------->ARR14(2)         --------->YAB1   <---------YAB1                                                 <---------ARR14(2)        <---------YAB1 <---------YAB1                                       --------->MYB52(1)   <---      --------->YAB1 ----------->GT1                                    --------->YAB1   <---------GLK1(2) XXXXXXXXXXXXXXXXXXXX>MIR859                                            <-----------GT1----------->ARR10 -------GT1        <------------CBF          --------->ZAT6       --------->ANAC55(2)  <---------TOE2(3)   tctctctataatgaaaacaaaaattgttattttagtctctgtatttgactctaactgaaatcacattcacttaataacaaactgagactaagattctctc  11349800                                                                          --------->TOE2(3)                                                                    --------->AtMYB61                                                                    <---------ICU4                                                                --------->MYB46(3)                  ------->GAMYB                                <---------At5g28300       <-----------GT1               --------->MYB52(1)     --------->ANAC58     <----------DOF2--------------->AGL15          --------->ZAT14<---------CCA1(2)    ----------->TBP <-----------GT1   --------->YAB1 -------DOF2 <---------MYB52(2)       --------->ANAC58 <---------CCA1(2) <---------ANAC55(2)  <------   ttttattctctctccactaacagacttctatctacatgagaagcaactatataactcatgtcttttaccaccattacataaataagaatataaacacttt  11349900                                                                                   <---------MYB52(2)                                                                                  ----------->GT1                                                                                  --------->ANAC46                                                                                  --------->ANAC55(2)                           <---------AHL20(2)                                     <---------ANAC55(2)                          --------->AHL20(2)   --------->GLK1(1)                  --------->ANAC58                    >>>>>>>>>TBF1         <---------At4g35610                     --------->ANAC58             ---------->DOF2      --------->ALFIN1                          <------ZmHOX2a(1)      ------------------------>ANAC81  <------ZmHOX2a(1)                <---------SPL7  <---------------------WRI1    <---------ANAC46                       <---------ANAC46  ---------->DOF2 ----DOF2  <---------YAB1 <---------AHL20(2)  <---------ARR14(2)<------ZmHOX2a(1) --------->ANAC55(1)   tgtctgaaaaattatcaaagaagaagaaataaatgggtggaggaagcagatttcaagaaccagtgaggatgagccgtaggaaacaagtaacaaaagagaa  11350000                                                                     <------NtERF2                                                                     <---------At4g35610                               ---------->DOF2                     --------->ETT(1)                          <---------ARR11(3)                       <---------DEAR3(1)                          <---------ARR11(1)                       <---------RAP2.6(2)                          --------->ARR11(3)                      --------->RAP2.6(3)                          <---------ARR14(2)                 --------->ATHB12                          --------->ARR14(2)             <---------HSFC1(2)                         <                         <---------CCA1(2) <---------ANAC46 <-------TEIL                      >>>>>>>                  --------->ARR14(2)      <-----------------------TaNAC69(2)          ------>ZmHOX2a(2)                 <---------CCA1(2)<---------At4g35610    --------->HSFC1(2)          <------ZmHOX2a(2)   ggaagaagatgaaaacttcaaatctccaaatcttgaagcagagagacgtagaagagagaagcttcattgtcggcttatggctctgcgatctcatgtcccc  11350100         --------->TOE2(3)        --------->ANAC58           <---------AHL20(2)        --------->ANAC58        <---------AHL20(2)                                                 <-       ------>MYB83 <---------ARR14(2)                                                          -----       ------>MYB46(1)        <---------YAB1                                                   ------      --------->MYB52(1)    <--------HAHB4               <---------MYB46(3)              ---------->DOF2     --------->DEAR3(1)     <---------ICU4              <---------WOX13(1)        --------->At4g35610    <---------MYB52(2)      --------->YAB1              <---------YAB1            <---------At4g35610    --------->MYB46(3)     --------->ICU4             --------->ATHB12    <---------ANAC46     ------ -----------HVH21   --------->ARR14(2)               --------->ICU4       <---------ANAC58 --------->ANAC58 >>>>>>>>>>LFY     <---------CCA1(2)                 <---------YAB1       <---------ANAC58 --------->ANAC58   attgtcaccaacgtaagtcccaaatctcgattattattttatgggtattttggtgatgattgttgttgtttttgtttcgttttcagatgactaaagcaag  11350200                                                                                               <-----                                                                                          ===========                                                                                          ===========                                                                                          --------->LBD16                                                                                        ----------->RAV1(2)                                                                                       ==============                                                                                       ------>ZmHOX2a(1)                                                                                       ==============                                                                                      <---------ALFIN1                              --------->At4g35610                                 <---------HSFC1(2) --------YAB1                <---------ARR11(3)   --------->GLK1(2)               <---------HSFB2a(1) ---->ICU4                   --------->ARR11(3)  <---------GLK1(2)                --------->HSFC1(2) --->ANAC58               <------ZmHOX2a(1)    <---------TOE2(3)                  --------->HSFB2a(1) --->ANAC58           --------->TOE1(2)    --------->YAB1           --------------->AGL15 ------>ZmHOX2a(1)   tattgttgaagatgcgattacttacataggagagcttcaaaacaatgttaagaatctcttagagacatttcatgaaatggaagaagctcctcctgagatt  11350300                    --------->YAB1                   <---------ATHB12               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             <---------ARR14(2)        --------->MYB52(1)      <---------MYB52(2)    --------->TOE1(3)      --------->MYB46(3)   ----------->RAV1(2) ----WOX13(1)--------->ARR14(2)                            --------->CCA1(2) =====================HOX2a_HOX2a                  --------->MYB52(1) ====================HOX2a_HOX2a                ------>ZmHOX2a(2) =====================HOX2a_HOX2a             <---------ARR11(3)               <---------TOE2(3) ====================HOX2a_HOX2a              --------->ARR11(3)      <---------LBD16   gatgaagaacaaacggatccaatgataaaacctgaagttgaaactagtgatcttaacgaagagatgaagaaactcggaatcgaggtttttaaaatttctc  11350400  Previous    Next  AGI:  At4g21326.1    Description:  ATSBT3.12; subtilase. similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G10510.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G10550.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT4G10550.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62885.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; (InterPro:IPR000209); contains InterPro domain Proteinase inhibitor I9, subtilisin propeptide; (InterPro:IPR010259); contains InterPro domain Peptidase S8, subtilisin-related Range:  from: 11346991    to: 11349664    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g21330.1    Description:  DYT1 (DYSFUNCTIONAL TAPETUM 1); DNA binding / transcription factor. similar to AMS (ABORTED MICROSPORES), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G16910.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76852.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 11349933    to: 11350705    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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