Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                ---------->DOF2                                           --------->YAB1                                         <---------AHL20(2)                                         --------->AHL20(2)                                        --------->YAB1                                       ----------->TBP                                     --------->YAB1                                            ------                --------->ZAT18 --------->ZAT14                                            <---------                <---------ZAT18 <---------ZAT14          <---------AHL20(1)          --------------->AtSPL8               --------->ALFIN1 --------->ZAT18          <---------ARR11(3)         <---------ANAC58             --------->ALFIN1   <---------ZAT18--------->DAG2             --------->YAB1   <---------DAG2           <---------ANAC58   --------->At4g35610        --------->AHL20(1)         <---------ANAC46           <---------ANAC58   <---------At4g35610 <----------ID1 ---------->DOF2    <---------ANAC58   tggaactgagaaggcgagtgggcatgtttgtgagcgcacttataaaaataaagggccaaaatattcttaaggcccataataggcttacttgtactttttc  11322000                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                         <------NtERF2                 <---------AHL20(2)                                     --------->ANAC58                <---------AHL20(1)                                      --------->ANAC46                --------->AHL20(1)          --------->MYB46(3)          --------->ANAC58                <---------AHL20(2)         --------->ANAC58            <---------ZAT18           ----    <-----------RAV1(2)                    --------->ANAC58       --------->ZAT14   <---------ANAC46    --------->YAB1             --------->YAB1          <---------ALFIN1<---------LBD16          ----- ---->ID1       --------->AHL20(2)       --------->MYB46(3)<---------YAB1--------->LBD16   ---------- -DOF2 <------ZmHOX2a(1)      <---------ATHB12      <-----------GT1    --------->ZAT18    --------->ZAT6   cttctatcaggagtctaatttattagaagcccatcatcttaaaacaaccaatttgtaccacatgatagagtagtccgcaagcattgacttggacactaaa  11322100             ---------->DOF2                                           --------->MYB59           <---------AHL20(2)                                      <---------ICU4                  <-        --------->YAB1                                            --------->ICU4                   <-    <----------DOF2         --------->ANAC58                 ----------->GT1 <------------CBF  <----- ----->DAG2--------->YAB1   --------->ANAC58              --------->YAB1 <------ZmHOX2a(1)     <----- ----->DOF2--------->AHL20(2)  ----------->RAV1(1)      <---------ARR11(3)  --------->KAN4(1)<------- ->GT1--------->AHL20(2)    --------->ANAC46   <-----------GT1--------->TOE2(3)    <---------WRKY12<-   aagtagcttttaataaaaaggaagacttgcaagcagcatttgccattttttactactatatcatcgtaaaaattaggaatattggtaaacgagagtggtt  11322200                           <---------ARR11(3)                           --------->ARR11(3)                          <---------CCA1(2)               <---------ANAC55(2)               --------->ANAC55(2)               <---------bZIP60(1)               <---------ANAC46 --------ANAC46<---------TGA2(1)                                              <---------------AtSPL8 --------ANAC58--------->TGA2(1)                                          --------->YAB1 ----ANAC58   ----------->STF1                                         >>>>>>>>>TBF1 ----ANAC58  <---------TGA2(2)                                   <---------TOE2(3)<-------TEIL --MYB46(3) ----------->TGA1  <----------DOF2   <------------CBF<---------DOF5.7(2)     <------------CBF --------ANAC58--------->bZIP60(1)       <----------DOF2        --------->MYB52(1)------->TEIL  <----   tgcgagtaagtcgaatgacgtaatccctatatctttttggaaactttctctattgaagtaacacattaacgaagaagaataatgtacatcgattgtttct  11322300              --------->O2              --------->ANAC55(2)              --------->ANAC55(1)              --------->ANAC46              --------->ANAC58              --------->ANAC58               <---------ANAC58                     ----------->GT1    <----------DOF2               <-------TEIL      ----------->GT1              ----------->GT1  ---------->ID1              --------->MYB59<---------ANAC58                   --------->DAG2 <-----------GT1              <---------TOE1(3)  <---------ANAC58              ---------->DOF2    --- ------DOF2  <---------TOE1(3)<---------TOE2(3)  <---------ANAC58           ----------->TBP ---------   ttttttctttttgttcacgttacagcatcgtttaggttcgtatttttgcttacttggtatatatgttagacattttttataaaaagttaaaaactaaaga  11322400               --------->DEAR3(1)              <------NtERF2             --------->ABI4(1)             <---------ATERF1(1)             ------>NtERF2            <---------DEAR3(1)            --------->ATERF1(2)            <---------ATERF1(2)            --------->RAP2.3(3)            --------->RAP2.3(2)            --------->DEAR3(1)           --------->ORA47(2)           <------NtERF2           --------->RAP2.6(1)           --------->RRTF1(1)           --------->RAP2.3(1)           --------->DEAR4(2)           --------->ATERF1(1)           --------->ERF1          <---------ORA47(2)          <---------RAP2.3(1)          <---------ATERF1(1)         <---------DEAR3(1)        --------->ATERF1(1)       <-----------HVH21      <------MYB83                                                                 ---------->DOF2      <------MYB46(1)                                --------->CCA1(2)        --------->WOX13(1)     <---------MYB46(3)                   >>>>>>>>>TBF1 ----------->GT1     <---------ATHB12       <-    --------->ALFIN1                   >>>>>>>>>TBF1<---------ARR14(2) --------->ANAC58           --- ------->DOF2--------->LBD16        >>>>>>>>>TBF1   --------->ARR14(2) --------->ANAC58           --- ->DOF2<---------PCF2            >>>>>>>>>TBF1--------->GLK1(2)   <----------ID1 >>>>>>>>>RAP2.2  ---   aaaagagtgggtcgccgccgatggatagacgagaagaagaagaagaagaaactggatatggtgagaagggaacaagaaatcaatctaaagaagacgagag  11322500                                                                                        <-----------ARR10                                                                                        <---------ARR14(2)                                                                                        --------->ARR14(2)                                                                                     <---------ANAC55(1)                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                         <---------At4g35610  <------                                                                         --------->At4g35610  -------          <---------ARR11(3)                                         <---------ARR14(2) <---------ARR11(1)          <---------GLK1(2)                                          --------->ARR14(2)<---------CCA1(2)          --------->ARR11(3)                                    --------->At4g35610  <---------ANAC46        ----------->ARR10                                       <------NtERF2        <---------ANAC55(2) --------RAP2.6(3)<---------ZAT2                               --------->ANAC58      --------->ANAC55(2) ------>DEAR3(1)  <---------At4g35610     --------->LBD16      --------->ANAC46   --------->ARR14(2) ------>RAP2.3(2) --------->ZAT2   <---------YAB1              --------->ANAC58   <---------ARR14(2) ------>RAP2.3(3) --------->At4g35610     ------>ZmHOX2a(1)   <---------ZAT18     --------->GLK1(2)   ccgtcttggtaagattttcgagctgatacctcttgatatgattcctgatatactcttgagactgcccgctaaatctgctgtgaggttccgtatcgtctcg  11322600                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                       ---------->DOF2           --------->ANAC46                                                           <---------WRKY12           --------->WOX13(1)                    --------->ARR14(2)                 <-----------HVH21   <---------TOE2(3)                             <---------ARR14(2)              <---------ATERF1(1)   <---------TOE1(3)                          <---------ANAC58                 <---------ANAC58   <---------YAB1                             <---------ANAC58                 <---------ANAC58 ---HSFB2a(2)                            <---------SPL7                        <---------ANAC46   --- -->HSFB2a(2)    <---------ALFIN1       <---------MYB46(3)         <----------DOF2 <---------ANAC46   aagctatggttatccatcaccactcgtccatatttcatcaggtcgttcgcgtttccttcttcaactcggctttgtcttatggcctgcgtcaaagcaagag  11322700                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                     ------->TEIL                                     <---------AGP1                                     <-----------ARR10                               ----------->TGA1                             <---------ICU4         --------->ETT(2)                     --------->YAB1                            --------->ICU4          --------->ZAT18                      <-----------GT1                         ------>MYB46(1)<---------SPL7                                  <---------YAB1          <-----------GT1------>MYB83<---------ARR14(2)                               <---------ICU4      --------->AHL20(2) -------->P  --------->ARR11(3)                              <---------YAB1  <---------ANAC58      ----------->RAV1(1)        --------->ALFIN1               <---------YAB1  <---------ANAC46 --------->ZAT14   <---------ARR11(3)            --------->AHL20(2)--------->ICU4  <---------ANAC58 <---------ZAT14   --------->ARR14(2)         ----------->GT1   --------->ICU4 <-------TEIL      <---------ZAT18<---------ANAC55(2)     <---------MYB52(1)    --------->YAB1     -- ------>CCA1(2)  --------->ANAC46 --------->ANAC55(2)    <-------GAMYB          <---------ICU4     <-   acatgcgtttatttatctcactgcaccaacatgatgacggatcttacgctcatgtggaccgttgtgagataaaatcccctaaacatgattattacaatcc  11322800                     <------MYB83                     <------MYB46(1)                     <---------ANAC58                     <---------ANAC46                     <---------ANAC58                    --------->MYB46(2)                    --------->MYB111(1)             --------->MYB52(1)             <---------DOF5.7(2)            <---------WRKY38(1)            <---------WRKY12          <-----------HVH21      --------->ARR14(2)      <---------ARR11(1)      <---------ARR14(2)      <---------ANAC46      --------->GLK1(2)      <---------LBD16      ------->TEIL  <---------AtMYB61                                                          ------     <---------ARR14(1)<---------ANAC46                                                        ------     <---------GLK1(2) <---------ANAC58                                                        <-----  ----------------->AG <---------ANAC58            <---------TOE1(2)                      --------->ANAC46  ----------------->AGL1 --------->ALFIN1     <---------ARR11(3)                         --------->HSFB2a(2) ------->GLK1(1)    <---------MYB46(3)  <-----------GT1                       ----------->GT1------->TEIL --------GLK1(1)  <---------MYB52(1) <----------DOF2           ------>ZmHOX2a(1) <-----------GT1   gagttccgaatctgtcaacggtttggtgtgtttcggagacttttacaatatcgtagtttggaatccttcaatgagacaacatgttacattacccgaacct  11322900  Previous    Next  AGI:  At4g21240.1    Description:  F-box family protein. Identical to Putative F-box protein At4g21240 [Arabidopsis Thaliana] (GB:O49565); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G47790.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60954.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 11322421    to: 11323674    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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