Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ===                  <-----------HVH21                                   <---------TOE2(3)    ------>ZmHOX2a(1)                <---------At4g35610                                   <---------TOE1(3)   --------->ANAC55(2)     --------->HSFB2a(2)                                       <------MYB46(1)            --------->TOE2(3)     <---------HSFB2a(2)                                       <------MYB83         <---------TOE2(2) ------------->AGL15                             <---------ARR11(3)  ---------->DOF2<---------TOE1(2) --------------AGL15                             --------->ARR11(3)  ================================ ---->ZmHOX2a(1)--------->At4g35610        <---------HSFB2a(2)--------->MYB59      ------>ZmHOX2a(1)   cctgcttatagaaatttcagcttcagagaattcagacaacaagttcaagaagatgttaagaagtttggttttaaagttggccttcctaggttccttaatc  11306600                                            --------->AHL20(2)                                           <---------AHL20(2)                                           --------->AHL20(2)                                           <---------AHL20(1)                                           --------->AHL20(1)                                       <---------YAB1                                     --------->YAB1                                   <----------DOF2         <---------AHL20(2)    <-----------GT1    <---------TOE1(3) -------ANAC55(2)         <---------AHL20(2)<---------AHL20(2) <---------AHL20(2) ------>TGA1a            <---------YAB1<---------AHL20(2)     --------->AHL20(2) -------O2      --------->ANAC58  --------->TOE2(3)        --------->ATHB12                      ---- ------>O2      --------->ANAC46<-----------GT1   <---------TOE2(3)                              <--- =============================================bZIP_DOF    <---------YAB1                  <---------- =======bZIP_DOF--------->ANAC58---------->ID1<---------YAB1  <---------AHL20(2)<<<<<<<<<<MYB80 -----   acgtctactaatttatacacccaaatttttatttttcctttataatttattttaggttttatgatttatttgaattgtttttggtttgattttttccata  11306700                                                         --------->AHL20(2)  --------->AHL20(2)         <---------ARR11(3)     --------->AHL20(2)  <---------AHL20(2)         <---------AHL20(2)     <---------AHL20(2) --------->AHL20(1)          --------->ARR11(3)    --------->AHL20(1) <---------AHL20(2)          --------->AHL20(1)    --------->AHL20(2) <---------AHL20(1)          <---------AHL20(1)    <---------AHL20(1) --------->AHL20(2) ------>ZmHOX2a(1)     --------->ICU4 <---------AHL20(2) ----->AHL20(2)    --------->TOE1(3)    <---------ICU4  --------->AHL20(2) ------AHL20(2)    --------->TOE2(3)   ------>ZmHOX2a(1)<---------AHL20(2) -GT1  <-----------GT1       --------->AHL20(2)    <---------AHL20(2)         --------->YAB1<------ZmHOX2a(1) ---->AHL20(2)  <-----------GT1 --------------->AtSPL8  --------->YAB1  >>>>>>>>>MYB2      ----------   taatttatttttcatgtttttccttaagaaatatattgttcctcattatcaaatttaattaaaatcgattagaaaaccaattttaagttacagaggaaaa  11306800                                                                                                  <--           <---------AHL20(2)                                                        --------->ARR11(3)          <---------AHL20(2)                                                         <---------ARR11(3)     <----------DOF2                                            <----------ID1       --------->AHL20(1)     <---------DAG2 <---------------AtSPL8                      ----------->GT1      <---------AHL20(1) ->GT1    --------->AHL20(2)                                ---------->DOF2   <---------TOE2(3)   <--   aactgaactttattaattttgaattgtacattgcaaaaaaaaaaaaaaaactcaatccgataaaaagagaaaaaaaaactaatgaaaaatatttggcatt  11306900                                                          <---------ICU4                                                         <---------ATHB51                                 --------->CCA1(2)       --------->AHL20(2)                        <-----------HVH21                --------->ICU4                   --------->AHL20(2)                    <---------AHL20(2)                   <---------AHL20(2)         <-----------HVH21         <---------TOE2(3)      <---------ARR11(3)     *TSS  --------->YAB1      xxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <---------AHL20(2)   <---------At4g35610   <---------YAB1             --------->AHL20(2) ----MYB83     <---------YAB1   <---------ARR14(2)--------->ANAC58         ------------------------>ANAC81 ----MYB46(1)  ----------->TBP  --------->ARR11(3)--------->ANAC58    ---------->DOF2          ------   tggttttattttatgttataaaaaaatgtcagaagatattagacgaagggtcacgataaataattagaaacaaaaagaattaaaaaaaaaaaaaaaaaaa  11307000                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     --------->ARR14(2)                                                --------->DEAR3(1)                                  <                        <---------DEAR3(1)      <---------ALFIN1                                    <                       <------NtERF2            --------->AtMYB61                               -----             <----------DOF2                   --------->MYB46(3)                               <----            <---------ANAC58       <---------ANAC46  <---------ARR14(2)                         <----  ---------->DOF2    <---------DEAR3(1)        <---------MYB55(2)--------->TOE2(3)          <-------TEIL ---->DOF2  <---------ANAC58       <---------AtLEC2--------->DEAR3(1)  ------->GAMYB      <---------ARR14(2)   agaataaagaaatggctttgctctcggcgatgaagttgcagggacgtccaccaccgatctcgtccaatctcaacccaaattccaaacctgcaggttcgga  11307100            --------->ANAC58           <---------HSFB2a(1)            --------->ANAC46           <---------HSFC1(2)            --------->ANAC58           --------->HSFC1(2)       ------>ZmHOX2a(1)               --------->HSFB2a(1)                                   --------      --------->TOE1(3)           --------->ANAC58                                         <---------TOE1(3)      --------->TOE2(3)         --------->MYB52(1)   --------->ZAT2                    --------->TOE2(3)   --------->ARR14(2)          <---------SPL7        <---------At4g35610          --------->ANAC58  <---------MYB52(1)  --------->ZAT2  --------->ANAC58      <---------At4g35610   --------->ANAC58  - ---------ANAC58      ----------->RAV1(2)            --------->At4g35610       --------->ZAT14     <- ---------ANAC58     ------->TEIL --------->ANAC58   <---------ZAT2 --------->At4g35610--------->TOE1(3) ---->ARR14(2)       --------->GLK1(2)--------->ANAC58 ----------->HVH21       <---------ZAT18     <- -----GLK1(2)   ------>NtERF2<------NtERF2<---------LBD16   --------->At4g35610<---------ZAT14------- -----ARR14(2) --------->DEAR3(1)--------->SPL7--------->GLK1(1)  --------->MYB46(3) ------->TEIL  <-   ttccgtttccttaaacgcctccgaacctggctccgaacggaagcctcggaaattcagctcacagctaaaccgctggaacagagcacgaaccttaaggtct  11307200           <---------------AtSPL3                                 --------->HSFB2a(1)     --------->ZAT2                                               <---------HSFB2a(1)     <---------ZAT2                                               --------->HSFC1(2)     <---------At4g35610                                     <------ZmHOX2a(2)     --------->At4g35610                                 --------->SPL7    --------->GLK1(2)                                  <-----------HVH21 <------NtERF2                                        <---------ANAC58 ->ARR11(3)--------------->AtSPL3                     <---------ANAC58 ----->NtERF2<---------SPL7                          <-------TEIL <---------HSFC1(2) --------ANAC58         --------->MYB52(1)        <---------At4g35610 --------ANAC46       <---------YAB1              --------->At4g35610 -->ALFIN1 --------------->AtSPL8             <-----------HVH21 ===================================== --------ANAC58 <---------YAB1<------ZmHOX2a(2) --------->SPL7  ---------->DOF2   <---------TOE2(3)   ggcgcgaagctggacagtacgattactaatggatcaaacaatacgaccggtccgatgcgtccgatcgaaagttcgagtcgcactgatgtttcgacattgg  11307300                                                  --------->RAP2.3(1)                                                  <------NtERF2                                                  --------->ATERF1(1)                                                 ------>NtERF2                                                 <---------DEAR4(2)                                                 <---------ATERF1(1)                                                 <---------ORA47(2)                                                 <---------ERF1                                                 <---------RAP2.3(1)                                                <---------RAP2.3(2)                                                --------->DEAR3(1)                                                <---------DEAR3(1)                                                <---------RAP2.3(3)                                                <---------RRTF1(3)                                                <---------ANAC46                                               <---------ABI4(1)                                               --------->ATERF1(1)                 --------->ANAC55(2)           <------NtERF2                 --------->ANAC58             <---------RRTF1(1)            <---------ICU4                    <---------ERF1            --------->YAB1                    <---------RAP2.3(1)           <---------YAB1                     <---------ATERF1(1)                                   -           --------->ICU4                     ------>NtERF2                                         -         --------->bZIP60(1)                 <---------RRTF1(3)                            <---------ORA47(2)         <---------bZIP60(1)                 <---------DREB2C(2)                           <---------RAP2.3(1)    <---------O2 <---------ANAC55(2)         <---------RRTF1(2)                            <---------ATERF1(1)    --------->O2 --------->ANAC58            <---------RAP2.3(2)                          <---------RAP2.6(2)    ===========================MYC_MYB       <---------DEAR3(1)                           <---------DEAR3(1)    <---------TGA1a                          <---------RAP2.6(2)                       <---------SPL7    <---------ANAC58                         <---------RAP2.3(3)               --------->ARR14(2)   -    <---------ANAC58                        --------->RAP2.6(3)                <---------ARR14(2) <--    <---------bZIP60(2)                   ----------->HVH21                 --------->ANAC46  -------    <---------ANAC46 >>>>>>>>>MYB98     --------->CCA1(2)                   --------->ANAC58<------NtERF2    --------->TGA1a --------->MYB52(1) --------->ARR14(2)                   --------->ANAC55(2)<----- ----------->HVH21<---------MYB52(2)   <---------ARR14(2)                   --------->ANAC58<-------- --------->DEAR3(1)----------->HVH21  <------NtERF2                      ----------->TGA1<---------ORA47(1) =============bZIP_DOF ------->GAMYB<---------ANAC46                     ----------->HVH21<---------RAP2.3(2)   acagcgacgtgtcatcatcaagtaacggagttagcgaggcggatatgacggcggcgaagtcgatttacatagtctctgacggaactggatggacggcgga  11307400                                                  <-------GAMYB                                                 <---------MYB46(3)       ---------->DOF2                          --------->ALFIN1     <---------MYB52(1)                   --------->ETT(2)     --------->DOF5.7(2)                  <---------WRKY38(1)    <-------GAMYB                         <---------ETT(2) -------->ANAC58                          ----------->HVH21 -------->ANAC46                       <------MYB46(1)                                 >>>>>>>>>>GATA-1 -------->ANAC58                       <------MYB83                                    <-----------GT1 -------ALFIN1                      <---------ANAC58                           --------->LBD16    <-- -->LBD16      <----------DOF2      <---------ANAC58               --------->ANAC46  <---------YAB1 -NtERF2<---------TOE2(3)           <---------ANAC46       <---------MYB52(1)<---------LBD16 <------- -LBD16<---------DOF5.7(2)         --------->ATHB12      ----------->GT1     <-----------RAV1(2)  <--   acacgccgttaacgctgctttgggacaattcgactattgcttggtcgaccgtggttgtcccgttaatacacatctcttctcaggggtattatcgtctttc  11307500  Previous    Next  AGI:  At4g21200.1    Description:  ATGA2OX8 (GIBBERELLIN 2-OXIDASE 8); gibberellin 2-beta-dioxygenase. Identical to Gibberellin 2-beta-dioxygenase 8 (GA2OX7) [Arabidopsis Thaliana] (GB:O49561); similar to ATGA2OX7 (GIBBERELLIN 2-OXIDASE 7), gibberellin 2-beta-dioxygenase/ gibberellin 20-oxidase [Arabidopsis thaliana] (TAIR:AT1G50960.1); similar to gibberellin 2-oxidase 1 [Nicotiana sylvestris] (GB:AAO92303.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 11302695    to: 11306611    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g21210.1    Description:  phosphoprotein phosphatase/ protein kinase. Identical to Protein At4g21210 [Arabidopsis Thaliana] (GB:O49562); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G01200.1); similar to pyruvate orthophosphate dikinase regulatory protein [Glycine max] (GB:ABX74942.1); contains InterPro domain Protein of unknown function DUF299 (InterPro:IPR005177); contains InterPro domain Pyruvate Pi dikinase regulator (InterPro:IPR017409) Range:  from: 11306955    to: 11308752    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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