Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                =======                                                                                              <------ZmHOX2a(1)                                                                                       <---------MYB52(2)                                                                                     <---------DOF5.7(2)                                                                                     --------->MYB52(1)                        --------->ZAT14                                          <---------TOE1(2)           <---------DAG2    --------->ATHB12                                    <---------TOE2(2)           <----------DOF2  --------->ICU4      ==============================bZIP_DOF --------->MYB46(3)           ===============================================bZIP_DOF              <-----------RAV1(2)     --------->WOX13(1) <---------ZAT14         --------->O2            ------>ZmHOX2a(1)--------->MYB52(1) ----->HSFB2a(2)       <----------DOF2          --------->TGA1a         <---------MYB52(1)   <------- ------HSFB2a(2)       ===================================bZIP_DOF     --------->TOE2(3)------->GAMYB --->At4g35610         <---------DAG2           ================================================MYC_MYB ----At4g35610 <-----------GT1           <---------GLK1(2)         <----------DOF2--------->ANAC55(2)   tgaaaatcaatctctttttgcctcgctttactgattagccctagcttctctcgtctcgcttctcgctctctttccttaggtctcaggtaacgaacaggac  11278000                                                                              --------->DEAR3(1)                                                                              <---------ALFIN1                                                                   ------>NtERF2 <----------DOF2                                                                   --------->ABI4(1)                                                                  <---------ALFIN1<----------DOF2                                                                  --------->DREB2C(2)                                                                  --------->DEAR3(1)                                                                  ------->GAMYB  <---------DAG2                                                                 --------->DEAR3(2)                                                                 --------->DEAR4(2)                                                                 --------->ATERF1(1)                                                                 <------NtERF2------->GAMYB                                                                 --------->MYB46(3)     --------->ATHB12                                                                <---------ATERF1(1)    <---------YAB1                  ------>ZmHOX2a(2)                   --------->AtMYB61 <---------ARR14(2)                 <---------At4g35610                  --------->DEAR3(1)--------->ARR14(2)                 --------->At4g35610  <---------MYB52(1) --------->AtMYB61   --------->ORA47(2)     <      <---------ARR14(2)       <----------DOF2--------->AtMYB61<---------ALFIN1------>NtERF2       <-      --------->ARR14(2)--------->GLK1(2)    --------->ANAC46------>NtERF2 <---------ALFIN1        <-   <---------ANAC46    <---------GLK1(2)   <---------ALFIN1  <-----------HVH21--------->DREB2C(2)  -- ========================HOX2a_HOX2a <---------DAG2   <---------ALFIN1 <---------MYB52(1)>>>>>>>>>ARR2 ---ID1         <---------AGP1 <---------DAG2--------->bZIP60(2)------>NtERF2--------->MYB46(3) -----   aaggagcgtttatgcattgatctgagattcttccttttcccttatccacctcatcaccacctctgccaccgccgtttccaccgccttttttgattgtgag  11278100               <---------WOX13(1)             <---------ICU4             <--------ATHB1             --------->YAB1             -------->ATHB1             <------------ATHB5            <---------YAB1            <---------ATHB12            <---------ATHB51            --------->ICU4         ------------>ATHB5                                <---------ANAC58    <---------ANAC58                                       <---------ANAC58    <---------ANAC46                              --------->ARR14(2)    <---------ANAC58         <---------At4g35610  <---------ARR14(2)               <-----------GT1 -------GAMYB--------->ATHB12<---------ZAT2       <---------TCP20      --------->LBD16 ----------RAV1(1)           --------->At4g35610 --------->GLK1(1)    <---------HSFB2a(2) --------MYB46(3)            --------->ZAT2     <---------MYB46(3)    --------->HSFB2a(2)          -- ------->MYB52(2)  <---------ANAC58       <----------DOF2  ----------->GT1      ----------->GT1   <-- ------->MYB.PH3(2)<---------ANAC58   <-----------GT1--------->ZAT6  <---------LBD16            -----   tttgttgcgtttcaatgattggcctgtcttcagcttcgattttcctttgggggttccactagcgtaacatttctggagaagattgtaactcactgagtca  11278200                                   <---------GLK1(2)                          <---------ICU4            --------->ZAT14                        --------->At4g35610                   <---------ARR11(1)               <---------ZAT18                        <---------At4g35610                   --------->GLK1(2)           ------>ZmHOX2a(1)                          --------->ARR14(2)                   ------->TEIL    --------->ARR14(2)                                     <---------ARR14(2)                   --------->ARR14(2)         --------->TOE2(3)                  <---------WOX13(1)                   <---------ARR14(2)     --------->GLK1(1)                     <------------CBF        <---------AtMYB61<---------YAB1   <---------GLK1(1)                    <---------MYB46(3) ------->YAB1      <-----------ARR10   <---------YAB1                          --------->ATHB12<----- -------ATHB51    <---------ARR14(1)--------->GLK1(2)                         <---------YAB1------>ZmHOX2a(2) ---->WOX13(1)    <---------CCA1(2)<---------ARR14(2)                 --------->YAB1<---------TOE2(3)   attataggttttggtctcgcgaatctgatcattttcagattctgatttcctcagagctctctctgtttgaaatgaaaatggtgattgaagttgatctgca  11278300                        <---------DEAR3(2)                      <---------MYB52(1)                      <------NtERF2                    --------->DEAR3(1)                 --------->ANAC58                 --------->ANAC58                <-------TEIL                --------->SPL7              <---------SPL7                                                <---------MYB52(1)    <---------TOE2(3)<-----------HVH21   <---------AHL20(2)      ----------->GT1    <---------TOE1(3)------>NtERF2 ----------->GT1        --------->At5g28300   <---------ZAT6 ----AtLEC2 <---------TOE2(3)    <---------ANAC46        ----------->GT1 <-----------RAV1(2)  -------   aggtttagggtttcaaggtacgccgtcgtttcatgaagtgtaatttaagttcaaatcgagggtaaatcggtaatatcaggtagtgtcatcaaactcacac  11278400                                                               --------->TOE2(3)  --------->WRKY12                                                               --------->TOE1(3)  --------->WRKY38(1)                                                             -------->P           --------->WRKY45                                                          <---------ANAC58       <---------MYB52(1)--                                       *TSS               <---------ANAC58       --------->DOF5.7(2)                              ----------->GT1          <---------TOE1(2)        <---------At4g35610--      <-----------GT1     <---------SPL7              ------>ZmHOX2a(1)         --------->At4g35610--     <-----------GT1  --------->MYB52(2)             --------->TOE1(2)          <-------GAMYB      -- -->ZAT6             <-------TEIL   ---------->DOF2<------ZmHOX2a(2)  --------->TOE2(3)            <-   tcattttttagccttctctctggttcgtcgtctggttcaaaagctatagatcgatcctaggcttacctcaaacctcagtctccgttgactactgagactc  11278500                                ------>ZmHOX2a(2)                               --------->GLK1(1)                               <------ZmHOX2a(2)                              <---------ARR14(2)                              --------->AGP1                              ------->TEIL                              --------->ARR14(2)              <----------DOF2 <-----------ARR10           --------->ARR11(3)          ------>ZmHOX2a(2)   --------->ARR11(3)          <---------ARR11(3)        --------->ARR14(2)    <---------ARR11(3)         <---------CCA1(2)        <---------ARR14(2) --------->ANAC46             ----------->ARR10      ----------->HVH21    --------->ANAC55(1)       --------->TOE1(3) ------->ETT(2)            --------->ANAC55(2)      ----------->GT1 ------->WRKY12           <---------LBD16<---------ARR14(2) ------->WRKY38(1)      <---------ZAT14  --------->ARR14(2)       <---------MYB52(1)   <---------ANAC46 ------->DEAR3(1)       --------->ARR14(2) ------>ZmHOX2a(2)     <-------GAMYB       --------->LBD16 --------ETT(2)         <---------ARR14(2)<------ZmHOX2a(2)     <---------MYB46(3)   <-----------HVH21   gtcgacctctgatccgcttcttcgactatacggatctacttccgatctgtaagaagcttaaatcttcggttgattttggaatccatccgtcgtagatgtg  11278600                                                                        ------->TEIL                                                                        --------->SPL7                                                                        <-------TEIL                                                                      --------->TOE2(2)                                                                      <---------SPL7                                                                     <---------ANAC58                                                                     <---------ANAC58                                                              <------NtERF2                                                             <------NtERF2                                                             --------->LBD16                                                           <---------LBD16                                                      <---------ICU4--------------->AtSPL3                                                     --------->ICU4 <---------------AtSPL8       <---                                                     <---------YAB1 <---------------AtSPL3      -----       --------->ATHB12    <---------MYB52(1)      --------->YAB1  --------->MYB52(1)        --------      --------->ICU4  <-----------GT1             --------->ICU4   <---------DOF5.7(2)<---------YAB1   taattgtattgatttggatgagtttatctgtttttttgagttttcttatgcagtgatgatggccggaggtaacgtacggtttctggttttgatactcgcc  11278700                                                             <---------HSFB2a(2)                                                          --------->ARR14(2)                                                        ------>NtERF2                                                        <---------RAP2.3(1)                                                       <---------RAP2.3(2)                                                       <---------DEAR3(1)                                                  <---------ARR14(2)            <---------At4g35610           ----------------------->TaNAC69(2)            <---------ZAT2              <---------GLK1(2) <---------ARR14(2)        <---------DEAR3(1)         ------>ZmHOX2a(2)  <---------LBD16                               <       <---------LBD16           <---------ARR14(2)  <-----------RAV1(1)                           <- ------SPL7 --------->ABI4(2)    --------->ARR14(2) ------>ZmHOX2a(2)                           ----- ---->DEAR3(1) <---------At4g35610<------ZmHOX2a(2)<------ZmHOX2a(2)                          ------- ->ANAC46  --------->ALFIN1  <---------At4g35610  --------->ARR14(2)    <---------SPL7 <------ZmHOX2a(2)   gtagcaatttgcggtgctgcttctgttttccagccgatctcagactctcaccgatctgcggctctggatgtcttcgtaccagtcgatggatcatacaaaa  11278800                                                                                  <---------TOE2(3)                                                                                 <---------DOF5.7(2)                                                                               --------->DOF5.7(2)                                                                           <---------ANAC58 <------MYB46(1)                 <---------REM1(1)                         <---------ANAC46 <------MYB83               <----------DOF2                                <---------ANAC58 <---------MYB46(3)        <---------ANAC58                             <--------P<---------TOE1(3) --------->MYB52(2)  <------NtERF2 --------->ALFIN1                    <---------ANAC58            <- ---------AtMYB61 --------->RAP2.6(3)           ------->GAMYB   <---------ANAC55(2)          <XXXXXXX -------P   --------->YAB1 <---------ANAC58    --------->MYB46(3)      <---------ANAC58   --------->ATHB12 ---->DAG2  --------->TOE2(3)   <---------TOE2(3)      <-----------GT1<---------MYB46(3) <---------YAB1 --->DOF2<---------CCA1(2) <---------ANAC46  <-----------GT1    --------->ANAC55(2)   <-------TEIL <-   ggttggtttctctatcttaagtcggcattgctttgatgtaggggttttaaccacatttcaccgattacatattggttgctcgttaatgttcatgaatggt  11278900  Previous    Next  AGI:  At4g21140.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G05400.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G05400.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39711.1) Range:  from: 11277546    to: 11278232    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g21150.1    Description:  ribophorin II (RPN2) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO40612.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64864.1); similar to Os01g0911200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045159.1); contains InterPro domain Ribophorin II; (InterPro:IPR008814) Range:  from: 11278439    to: 11283858    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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