Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->TGA1a     --------->ANAC46     --------->ANAC58     --------->ANAC55(2)     --------->ANAC58     <---------TGA1a     <---------O2     --------->ANAC55(1)     --------->O2   --------->REM1(1)                    <---------ZAT14   <---------ALFIN1                --------->ZAT14  <---------REM1(2)              --------->ANAC58                              --------->TOE1(3) ------->LBD16                   --------->ANAC58                              --------->TOE2(3) --------At4g35610           --------->ANAC58                         <---------ALFIN1 ------->At4g35610           --------->ANAC58                       >>>>>>>>>>>>>>>>>LFY          <-- ------>ANAC46              <---------ICU4    <----------DOF2       ------>ZmHOX2a(1)             --- ------LBD16             --------->YAB1 --------->ZAT14            --------->ANAC46   <----------DOF2   ccgctacacgtctcgctctatgctctctcataagcactctactatactctttcgcaagtctaatcccatcctccactgtaaccttatactttggtaactc  11277800                                                                                                 <---                --------->MYB52(1)                                                               ----    --------->LBD16                                                                            ------   <---------ANAC58                                        <------NtERF2                  <----------DOF2   --------->ANAC55(2)                          --------->YAB1                        <---------ALFIN1   ----------->GT1                             <---------ATHB12                      ------>ZmHOX2a(2)   <---------ANAC46                           <---------ARR14(2)                     --------->MYB46(3)   <---------HSFB2a(2)                        --------->ARR14(2)                    <------ZmHOX2a(2)   <---------ANAC55(2)              --------->LBD16       ------>NtERF2            <---------ARR14(2)   --------->HSFB2a(2)           <---------ATHB12         --------->ZAT14          --------->ARR14(2)   <---------ANAC58             <---------ARR14(2)        <---------ZAT18         <------ZmHOX2a(1) -------At4g35610 --------->ANAC58  ------>ZmHOX2a(1) <---------DEAR3(1)      ---------->DOF2  <----- ------>At4g35610 --------->ANAC58 <---------LBD16------>ZmHOX2a(1)        --------->YAB1<---------DAG2   atcttccgtaaaaatccctaacgaaatgtaatccaatcctggagtcccaatcctcatcggcgcagtagtaactcccatcgtaaaggatccacctttcttc  11277900                                                                                              =======                                                                                              <------ZmHOX2a(1)                                                                                       --------->MYB46(3)                                                                                     --------->MYB52(1)                                                                                     <---------DOF5.7(2)                        --------->ZAT14                                          <---------TOE2(2)           ===============================================bZIP_DOF               <---------TOE1(2)           <----------DOF2   --------->ATHB12                                   <-----------RAV1(2)           <---------DAG2   --------->ICU4      --------->O2            <---------MYB52(1)   <-------     --------->WOX13(1) <---------ZAT14         --------->TGA1a         ------>ZmHOX2a(1)--------->MYB52(1) ------HSFB2a(2)       <----------DOF2          ==============================bZIP_DOF <---------MYB52(2) ----->HSFB2a(2)       <---------DAG2           ================================================MYC_MYB --->At4g35610         ===================================bZIP_DOF     --------->TOE2(3)------->GAMYB ----At4g35610 <-----------GT1           <---------GLK1(2)         <----------DOF2--------->ANAC55(2)   tgaaaatcaatctctttttgcctcgctttactgattagccctagcttctctcgtctcgcttctcgctctctttccttaggtctcaggtaacgaacaggac  11278000                                                                              <---------ALFIN1                                                                              ------->GAMYB                                                                   --------->ABI4(1)                                                                   ------>NtERF2 <----------DOF2                                                                  <---------ALFIN1<----------DOF2                                                                  ------->GAMYB  <---------DAG2                                                                  --------->DEAR3(1)                                                                  --------->DREB2C(2)                                                                 <------NtERF2--------->DEAR3(1)                                                                 --------->ATERF1(1)                                                                 --------->DEAR4(2)                                                                 --------->DEAR3(2)                                                                 --------->MYB46(3)     --------->ATHB12                                                                <---------ATERF1(1)    <---------YAB1                  ------>ZmHOX2a(2)                   --------->AtMYB61 <---------ARR14(2)                 --------->At4g35610                  --------->DEAR3(1)--------->ARR14(2)                 <---------At4g35610  <---------MYB52(1) --------->AtMYB61   --------->ORA47(2)     <      --------->ARR14(2)       <---------DAG2--------->ANAC46------>NtERF2 <---------ALFIN1        --      <---------ARR14(2)--------->GLK1(2)    --------->bZIP60(2)------>NtERF2--------->MYB46(3)    <-   <---------ANAC46    <---------GLK1(2)   <---------ALFIN1  <-----------HVH21--------->DREB2C(2)  <- ========================HOX2a_HOX2a <---------DAG2   <---------ALFIN1 <---------MYB52(1)>>>>>>>>>ARR2 ---ID1         <---------AGP1 <----------DOF2--------->AtMYB61<---------ALFIN1------>NtERF2    -----   aaggagcgtttatgcattgatctgagattcttccttttcccttatccacctcatcaccacctctgccaccgccgtttccaccgccttttttgattgtgag  11278100               <---------WOX13(1)             -------->ATHB1             <--------ATHB1             <------------ATHB5             --------->ATHB12             --------->YAB1            <---------ATHB12            --------->ICU4            <---------ATHB51            <---------YAB1         ------------>ATHB5                                <---------ANAC58    <---------ANAC46                                       ----------->GT1    <---------ANAC58                              --------->ARR14(2)    <---------ANAC58         <---------At4g35610  <---------ARR14(2)               <-----------GT1 -------GAMYB<---------ICU4  <---------ZAT2       <---------TCP20      --------->LBD16 ------->MYB52(2)            --------->ZAT2      --------->GLK1(1)    <---------HSFB2a(2) --------MYB46(3)            --------->At4g35610<---------MYB46(3)    --------->HSFB2a(2)          -- ----------RAV1(1) <---------ANAC58       <----------DOF2  <---------ANAC58     ----------->GT1   <-- ------->MYB.PH3(2)<---------ANAC58   <-----------GT1--------->ZAT6  <---------LBD16            -----   tttgttgcgtttcaatgattggcctgtcttcagcttcgattttcctttgggggttccactagcgtaacatttctggagaagattgtaactcactgagtca  11278200                                   --------->ARR14(2)                          <---------ICU4                                                   <---------At4g35610                   <---------ARR14(2)               <---------ZAT18                        --------->At4g35610                   --------->ARR14(2)          ------>ZmHOX2a(1)                          --------->ARR14(2)                   ------->TEIL    <---------GLK1(2)--------->ZAT14                       <---------ARR14(2)                   <-----------ARR10          --------->TOE2(3)                  <---------WOX13(1)                   <---------ARR11(1)     --------->GLK1(1)                     <------------CBF        <---------AtMYB61<---------YAB1   <---------GLK1(1)                    --------->ATHB12<----- ------->YAB1      --------->GLK1(2)   <---------YAB1                          <---------MYB46(3) -------ATHB51    <---------ARR14(1)--------->GLK1(2)                         <---------YAB1------>ZmHOX2a(2) ---->WOX13(1)    <---------CCA1(2)<---------ARR14(2)                 --------->YAB1<---------TOE2(3)   attataggttttggtctcgcgaatctgatcattttcagattctgatttcctcagagctctctctgtttgaaatgaaaatggtgattgaagttgatctgca  11278300                        <---------DEAR3(2)                      <---------MYB52(1)                      <------NtERF2                    --------->DEAR3(1)                 --------->ANAC58                 --------->ANAC58                <-------TEIL                --------->SPL7              <---------SPL7                                                <---------MYB52(1)    <---------TOE2(3)------>NtERF2 ----------->GT1        --------->At5g28300    <---------TOE1(3)<-----------HVH21   <---------AHL20(2)      ----------->GT1<---------ZAT6 ----AtLEC2 <---------TOE2(3)    <---------ANAC46        ----------->GT1 <-----------RAV1(2)  -------   aggtttagggtttcaaggtacgccgtcgtttcatgaagtgtaatttaagttcaaatcgagggtaaatcggtaatatcaggtagtgtcatcaaactcacac  11278400                                                               --------->TOE1(3)  --------->WRKY12                                                               --------->TOE2(3)  --------->WRKY38(1)                                                             -------->P           --------->WRKY45                                                          <---------ANAC58       --------->DOF5.7(2)                                       *TSS               <---------ANAC58       <---------MYB52(1)--                              ----------->GT1          <---------TOE1(2)        <---------At4g35610<-      <-----------GT1     <---------SPL7              ------>ZmHOX2a(1)         <-------GAMYB      --     <-----------GT1  --------->MYB52(2)             --------->TOE1(2)          --------->At4g35610-- -->ZAT6             <-------TEIL   ---------->DOF2<------ZmHOX2a(2)  --------->TOE2(3)            --   tcattttttagccttctctctggttcgtcgtctggttcaaaagctatagatcgatcctaggcttacctcaaacctcagtctccgttgactactgagactc  11278500                                ------>ZmHOX2a(2)                               --------->GLK1(1)                               <------ZmHOX2a(2)                              ------->TEIL                              --------->ARR14(2)                              <---------ARR11(3)                              <-----------ARR10              <----------DOF2 --------->ARR11(3)          <---------ARR11(3)          ------>ZmHOX2a(2)   <---------ARR14(2)          --------->ARR11(3)        <---------ARR14(2)    --------->AGP1             <---------CCA1(2)        --------->ARR14(2) --------->ANAC55(2)          ----------->ARR10      ----------->HVH21    --------->ANAC55(1)       --------->TOE1(3) ------->ETT(2)            --------->ANAC46         ----------->GT1 --------ETT(2)           <---------LBD16--------->ARR14(2) ------->DEAR3(1)       <---------ZAT14  <---------ARR14(2)       <---------MYB52(1)   <---------ANAC46 ------->WRKY12         --------->ARR14(2) ------>ZmHOX2a(2)     <-------GAMYB       <-----------HVH21 ------->WRKY38(1)      <---------ARR14(2)<------ZmHOX2a(2)     <---------MYB46(3)   --------->LBD16   gtcgacctctgatccgcttcttcgactatacggatctacttccgatctgtaagaagcttaaatcttcggttgattttggaatccatccgtcgtagatgtg  11278600                                                                        ------->TEIL                                                                        --------->SPL7                                                                        <-------TEIL                                                                      <---------SPL7                                                                      --------->TOE2(2)                                                                     <---------ANAC58                                                                     <---------ANAC58                                                              <------NtERF2                                                             --------->LBD16                                                             <------NtERF2                                                           <---------LBD16                                                      <---------ICU4--------------->AtSPL3                                                     --------->ICU4 <---------------AtSPL8       <---                                                     <---------YAB1 <---------------AtSPL3      -----       --------->ATHB12    <---------MYB52(1)      --------->YAB1  <---------DOF5.7(2)       --------      --------->ICU4  <-----------GT1             --------->ICU4   --------->MYB52(1) <---------YAB1   taattgtattgatttggatgagtttatctgtttttttgagttttcttatgcagtgatgatggccggaggtaacgtacggtttctggttttgatactcgcc  11278700  Previous    Next  AGI:  At4g21140.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G05400.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G05400.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39711.1) Range:  from: 11277546    to: 11278232    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g21150.1    Description:  ribophorin II (RPN2) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO40612.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64864.1); similar to Os01g0911200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045159.1); contains InterPro domain Ribophorin II; (InterPro:IPR008814) Range:  from: 11278439    to: 11283858    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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