Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <------MYB46(1)                                                                              <------MYB83                                                                             --------->MYB111(2)                                                                             <---------DEAR3(1)                                                                             <---------AtMYB61                                                                             --------->MYB55(2)                                                                             --------->MYB111(1)                                                                             --------->MYB46(2)                                                                             <---------MYB46(3)                                                                            <--------P                                   <---------ANAC58                         <---------MYB55(1)    ---                                   <---------ANAC58                   --------->MYB111(1)        ----                             <---------ICU4                          <--------P <---------ANAC46 <---      ----------->GT1       <---------ATHB12             <------ZmHOX2a(1)<---------MYB46(3)--------- -->AHL20(2)          ----------->GT1           <---------YAB1    <---------TOE2(3)    --------->YAB1 ->AHL20(2)          ----------->GT1 ----------->HVH21<------ZmHOX2a(1)   --------->MYB55(2)---------   aaaaaaacttgaaaaattaggggaggctaaatcattttcttgacgcgcttgtaataggaggagcaattgtggtaagtggttggtgtgaattagaacccaa  11269700                                                                                       --------->ICU4                                                                                     <---------ICU4                                                                                    <---------YAB1                                                                           --------->AHL20(2)                               --------->AHL20(2)                        ============================ ------>YAB1                   --------->AHL20(1)                        <----------DOF2    <-------- ----->ICU4                    <---------AHL20(1)                        --------------->AGL15 ------ATHB12                  <---------AHL20(2)                  <----------DOF2  --------->ICU4 >ANAC58                      --------->AHL20(2)                   <---------DAG2 --------->YAB1 >ANAC58                      <---------ATHB12                  <-----------GT1  <---------YAB1  ----   ttatcaactaagtcgagttttgtttaaaaccaataaatttcatatacaagtttgaaactgaacatataactttttctttatatatcataattttgagtat  11269800                                                     ----------->HVH21                                                   --------->O2                             <--------                                                   <---------ANAC55(2)                      <--------                                                   <---------TGA1a                          ---------                =====================================================================================                --------------->AGL15              <---------O2                            <---------      <-----------GT1                              ===============================================bZIP_DOF   --------->CCA1(2)                <---------AHL20(2)   ------>ZmHOX2a(2)                 <---------  --------->ARR14(2)     ====================================bZIP_DOF                  <----------DOF2  <---------ARR14(2)     ---------->DOF2           --------->ANAC55(2)                ------>ZmHOX2a(2) ===============================MADS_MADS   --------->HSFB2a(2)          <---------CCA1(2) <--------- -ANAC46     <-----------GT1   <---------YAB1--------->LBD16  ----------->GT1       <---------ARR11(3) ----->MYB52(1) <---------------AGL15       <---------HSFB2a(2)       <-------TEIL  --------->ARR11(3)   aacggatataacattttacttaaatgagaaagtactattgaattatccagaagacgtgatccgatggaaaaattcgtatcacacatgatcttttcttttt  11269900         <---------ARR14(2)         <---------ARR11(3)         --------->ARR14(2)                                               --------->At4g35610         <---------GLK1(2)                                               <---------MYB46(3)   --------->ANAC58                                                    --------->ZAT2   --------->ANAC58                                                    <---------ZAT2 -------AGL15                                                          <---------At4g35610 --DOF2  --------->ARR11(3)                                            --------->At4g35610 ------>AGL15                                                         ------->TEIL      <-----------GT1 =======MADS_MADS                                           <---------WRKY45      -------->P --------AGL3                                               <---------WRKY12----------->HVH21 --------AGL1            <---------YAB1                     <---------WRKY38(1)   ------>MYB83 --------AGL2          --------->YAB1   <----------DOF2    --------->WRKY18(1)    ------>MYB46(1)   atggcacaccagattttgtttacatttataattcgatttcatctttttcttagaaaaaatggtcaaagaatgcagctggtgaccaactagtgaccataca  11270000                                         <---------AHL20(2)                                         --------->AHL20(2)                                         <                                        <---------AHL20(1)                                 <---------ICU4                                        <---------AHL20(2)                                 -------->HAHB4                                        --------->AHL20(2)--------->GLK1(1)                <--------ATHB1                                     --------->AHL20(2) *TSS    <---------ZAT2             --------->ATHB51                                     --------->ATHB51 <-----------GT1                     <---------ATHB51        <---------ARR11(3)        --------->TOE2(3)<---------CCA1(2)                      <---------AHL20(2)        --------->ARR11(3) <---------TOE2(3)   <---------At5g28300        --------->ANAC46--------->AHL20(2)       <---------GLK1(2)   <---------TOE1(3)  <-----------GT1   <---------At4g35610<---------ETT(2) -   acaagaacaaaatctcatggactctatttaaggtttccataatttaatttaccgtatcacatttccagctaattacacaaaaccgtcgataaataattgt  11270100                                 <------ZmHOX2a(1)                  --------->ANAC58                                                     <-----------GT1                  --------->ANAC46                                                 <---------AHL20(2)          --------->AHL20(2) ---------->DOF2                                       --------->AHL20(2)          <---------AHL20(2)<---------WRKY12                                  <---------MYB52(1)     ----------->GT1      <-----------HVH21               <----------DOF2--------->GLK1(2)   ---------->DOF2--------->ANAC58     <---------------AGL15      --------->ANAC58--------->AHL20(2) ---------HSFB2a(2)       --------->TOE2(3)      ---------->DOF2  --------->ANAC58<---------AHL20(2) -------->HSFB2a(2)      <----------ID1--------------->AGL15   <------ZmHOX2a(1) <---------YAB1  ----   ttatagaaagaaataaatacaagaaaaacgtcaaaggatagctactataagtaaggcagactttaggaacccaaaattctgttattaatttacaaaaact  11270200                                                                                 ------->TEIL                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                                 --------->GLK1(2)                                                                              <---------YAB1                                                                           --------->GLK1(2)        <           <---------DAG2                                                 <---------ARR14(2) --------           <----------DOF2                                                --------->ARR14(2) <-------        <-----------GT1       <---------YAB1           <----------DOF2    <---------GLK1(2)  --------      <-----------GT1       <-----------GT1   --------->MYB52(1)     ------>ZmHOX2a(2)      <-------- ------>DOF2      <---------GLK1(2)  --------->ZAT6<---------GLK1(2)<------ZmHOX2a(2)    --------->YAB1   aaagagtttttcacttttcagtttctcttcttaccattcactctaaaaaaacagagtctttataaaaccgatctcagattctgaatctgaatcagaatct  11270300                                          ----------->HVH21                                          ----------->TGA1                                       <---------ANAC46                                       --------->ALFIN1                                       <---------AtMYB61                                     <---------MYB46(3)                                     <------MYB83                                     <------MYB46(1)                                                <                                    --------->MYB55(2)                                              <                                    --------->ALFIN1               <---------MYB46(3)           -----    --------->YAB1                  <---------AtMYB61       <------NtERF2                      <----- ------ZmHOX2a(2)                   <---------DEAR3(1)     <---------DEAR3(2)                  ------ ->ARR14(2)                     <---------ANAC46           ------>NtERF2                     -------- --ARR14(2)                  <---------ANAC58             <---------DEAR3(1)              <---------ANAC58 ->GLK1(2)                   <---------ANAC58           <-----------HVH21--------->AtLEC2 <---------ANAC58 -GLK1(2)             --------->AHL20(2)<---------MYB46(3)<---------At1g77200  ---------->DOF2<------   ggatcaacataattttctaacaaaaaaaatggcttcgggtggtggtgacgatgggcttcgtcggcgaggctgttcatgcacaaaagacgatttcttaccg  11270400  --------->GLK1(2)                                               ----------->GT1 ---------HSFB2a(1)                                               ------>ZmHOX2a(2) ---------HSFC1(2)                     ---------->DOF2    <-------TEIL ---->LBD16                   ---------->DOF2          <------MYB46(1) ----HSFB2a(2)             --------->TOE1(3)           <------MYB83    --------->YAB1        ------>NtERF2 --->HSFB2a(2)             --------->TOE2(3)           <---------DEAR3(2)             --------->ZAT14 ->MYB52(1)                <---------MYB59             <---------MYB46(3)       <-----------HVH21 ---LBD16 ---------->DOF2 <---------ANAC55(2)         <---------DEAR3(1) <---------YAB1     ---------   gaagaatcgttccaaagcatggggaattacctaaaagcccttaaagaaacaccgagtcggttcatggatcgtattatgactcggtcactagactccgacg  11270500                                                                                                    -                                                           ------>ZmHOX2a(2)                       --                                                          <---------GLK1(1)                        <-                                                          <------ZmHOX2a(2)                        <-                                                          --------->GLK1(1)                        --                                                         --------->ARR11(3)                        --                                                         <---------ARR11(3)                        <-                                                     <---------ANAC46                              <-                                                  --------->ALFIN1                                ---                                                <---------O2                    --------->ZAT14   <--                                                <---------bZIP60(2)             <---------ZAT18   <--                                                <---------ANAC58                <---------ZAT14   ---                                                <---------ANAC58                --------->ABI4(2) <--                                                <---------TGA1a        <------MYB83<---------RAP2.6(3)                            <---------O2      <---------DOF5.7(2)      <------MYB46(1)            ---         <---------REM1(1)  <---------ANAC55(2) <---------ANAC46      <---------AtMYB61<---------At4g35610   <---------TOE2(3)        --------->O2     --------->WRKY12         --------->MYB46(2)     <-------  --------->MYB52(1)    <-----------HVH21    ----------->HVH21        --------->MYB111(1)  <---------ARR14(2)  <-----------GT1     <---------ZAT6        --------->DOF5.7(2)       --------->MYB59<---------WRKY38(1) >DEAR3(1)      <-------TEIL--------->ANAC55(2) --------->O2        <---------ANAC46 <---------WRKY12   agattaacgagatgaaggctcgtagtggtcacgagatgaagaagacgttgacgtggtgggatctcatgtggtttggtatcggtgcagtcatcggctctgg  11270600  Previous    Next  AGI:  At4g21120.1    Description:  AAT1 (CATIONIC AMINO ACID TRANSPORTER 1); cationic amino acid transmembrane transporter. similar to CAT5 (CATIONIC AMINO ACID TRANSPORTER 5), cationic amino acid transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G34960.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73404.1); similar to Amino acid permease family protein [Oryza sativa (japonica cultivar-group)] (GB:ABA99390.1); similar to hypothetical protein OsI_037835 [Oryza sativa (indica cultivar-group)] (GB:EAY83876.1); contains InterPro domain Cationic amino acid transporter (InterPro:IPR015606); contains InterPro domain Amino acid permease-associated region; (InterP Range:  from: 11270056    to: 11273984    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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