Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------GLK1(2)                                   --------->HSFC1(2)                                              <-                                   <---------At4g35610                                             --                            <---------KAN4(2)                                             <---------At5g28300                       --------->DAG2           ---------->ID1                         <-----------HVH21                      ---------->DOF2          <-----------GT1                        --------->ANAC46 ------>REM1(1)  ----------->GT1   --------->At4g35610            <----------DOF2     --------->WOX13(1) ->GLK1(2)    --------->ARR14(2)   <---------HSFC1(2) <----------DOF2              ------->TEIL------   acaacatgtcgaatggaatcggcaaaaaggaataagcagcttcttgatttttccttcttttttatatgcttttggtttctcaatgtatcagtcactgccc  11266800                                                                        --------->MYB52(2)                                                                  <---------WOX13(1)                                                                --------->ATHB51                                                                --------->ATHB12                                                                <--------ATHB1                                                                <---------ICU4                                                               <---------ATHB51                                                               --------->AHL20(2)                                                               <---------AHL20(2)                    <---------ZAT14                <---------ANAC58  <---------ANAC58       --------->At4g35610                         <---------ANAC46  <---------ANAC46              --       <---------At4g35610   <----------DOF2       <---------ANAC58  <---------ANAC58              <- ------MYC3    <---------TOE2(3)                <-----------GT1<---------ATHB12                ------ ----->MYC3    <---------TOE1(3)               --------->KAN4(2)-------->HAHB4           ---------->DOF2 ----------->AGL2   --------->ZAT18     <---------At4g35610    --------->ICU4          --------->ETT(2)   atatgcagtagcagactaaggttgcactggtctttttcttgaagctgtttattccgtcttgccaaataattgcttagttgcagacaatgtcgaaagctaa  11266900                                    <-----------GT1                                 <---------ARR14(2)                        <---------ARR11(3)                                             ------->MYC3              --------->DAG2     --------->ARR14(2)                                    <-------MYC3      <---------TOE2(3) --------->ARR11(3)                                             <-------MYC2 ------->ARR11(3)       <---------AHL20(1)                                             ------->MYC2<- --------ARR11(3)       --------->AHL20(1)                                    <-----------GT1      -- ---->DOF2   ---------->DOF2 <---------LBD16                      ------>ZmHOX2a(1) <---------ALFIN1   agatgtttgatgttataaagttccaatattttggggattttctatttgcatttatgccaagttgaatcctataggttttgttacttccacgttctactaa  11267000                                                              ------>ZmHOX2a(1)                                                          <---------GLK1(1)                                                         <---------ARR14(2)                                                         --------->ARR14(2)            --------->ANAC58                            <------ZmHOX2a(1)                       <----            --------->ANAC58                        --------->ZAT14                   <---------At4g35610 ---------DOF2               --------->YAB1     <---------ICU4--------->LBD16         --------->At4g35610 --------------------->TaNAC69(2)  ----------->GT1  <---------ZAT14               <-----------TGA1   actttgtagtttgtaagcatccgtcttctattcaaaatggaaatacaaaatcactacaggattcctgaaaattgtgctaaacttcgtcatcagaaaaact  11267100                                             ---------->DOF2        --------->AHL20(2)              --------->ZAT6        <---------AHL20(2)            --------->MYB52(1)            --------->At4g35610       <---------AHL20(2)          --------->YAB1       <---------YAB1       --------->AHL20(2)        <---------TOE2(3)     <---------AHL20(2)                          <-       <---------AHL20(1)       ---------->DOF2     --------->AHL20(1)             --------->MYB46(3)      --------->ICU4           --------->AHL20(2)   <---------AHL20(1)        <---------ARR11(3)   --   <---------AHL20(2)         --------->AHL20(2)    <---------ARR11(3) ------>NtERF2--------->AtMYB61 --------->ANAC55(2)     ------------>CBF --------->At5g28300    ---------->DOF2 <-----------GT1*TSS ------DOF2  <---------AHL20(2)<---------AHL20(2)   --------->ARR11(3)--------->DEAR3(1)     <-------   tttatgtaatttttttaaaatgtcttatccaatttaaagataacagtaaaagaatatttttattcgtaagagcggcccaagataaaccactcgttatacc  11267200                                                                     =============HOX2a_HOX2a                                                                     ------>ZmHOX2a(2)                                                                     ================================                                                                    =================================                                                                    <------ZmHOX2a(2)                                                                    ==============HOX2a_HOX2a                                                                ------>NtERF2                                                                --------->LBD16                                                                <------NtERF2                                                               --------->RAP2.3(2)                                                               --------->RRTF1(3)                                                               --------->DEAR3(1)                                                              --------->ATERF1(1)                                                              <------NtERF2                                                              <---------LBD16                                       <------MYB46(1)       <---------RAP2.3(1)                                       <---------DEAR3(2)    <---------RRTF1(1)                                       <---------MYB46(3)    <---------ATERF1(1)                                       <------MYB83          ------>NtERF2                                      <---------TOE2(2)     <---------DEAR3(1)                      <---------HSFC1(2)                    --------->ANAC46             --------->TOE2(3)        <---------TOE1(2)   ==================HOX2a_HOX2a             --------->TOE1(3)       <---------MYB52(1)   ------>ZmHOX2a(1)------>ZmHOX2a(1) --------GLK1(1)      --------->HSFC1(2)     <<<<<<<<<TBF1=================HOX2a_HOX2a ------->GLK1(1)---------->DOF2  ------>NtERF2            <---------ATERF1(1) --------->HSFB2a(2) ----GT1     ------->GAMYB      --------->DEAR3(1) <----------DOF2 <---------ARR11(3)          ------   gatttccgaacacaaccctaaagaggcttcttcgacgacgttggttcttcttcctttgtcctgcgccgcgatctctccttctccaacttccctcgtcctg  11267300                                                --------->ANAC58                                                --------->ANAC58        <---------HSFC1(2)                     ------>NtERF2        --------->HSFC1(2)              <---------ANAC58                          <-----------GT1        <---------At4g35610             <---------ANAC58    <-----------GT1      <-----------GT1 =HOX2a_HOX2a                      <---------ATHB12   <----------DOF2    --------->TOE1(3) =HOX2a_HOX2a                     ------>MYB83<---------ALFIN1           --------->TOE2(3) >ZmHOX2a(1)                      ------>MYB46(1)--------->DEAR3(1)     --------->ZAT6   tccaaaggtaagcttcttcaatttctgtctcataccaatcttgcttcggcaccctccttttgtttcggttcttaaccctaaattttccccttctatccca  11267400                                                                      <---------YAB1                                                                     <---------TOE2(3)                 --------->TOE1(3)                            --------->HSFB2a(2)                 --------->TOE2(3)                        <---------ZAT14                 <-------GAMYB          --------->YAB1                                  --------->ZAT14          ------->GAMYB         ----------->GT1                      <---------DAG2  <---------HSFB2a(2)-------->P        <---------WOX13(1) <-----------GT1    <----------DOF2<---------LBD16  <------ZmHOX2a(2)   aaacacagagattgataaaccctaattgttcaccttctattactgaaactttatctagactgttctggatttatgtttggatcaaccctctgcgttgtat  11267500                                             <---------ANAC58                                             <---------ANAC58                                          ------>ZmHOX2a(1)                                    <---------HSFB2a(1)                                --------->LBD16                               --------->HSFB2a(2)                      --------->GLK1(2)                               <---------HSFB2a(2)                      <---------ARR14(2)                     --------->TOE2(3)   <---------ANAC58              <---------GLK1(2)                     --------->TOE1(3)   <---------ANAC58     <---------------AGL15                 <---------ARR14(2) --------->HSFB2a(1)       <----------DOF2                       -                 --------->ARR14(2) --------->HSFC1(2)        --------------->AGL15      ---------->DOF2         ----------->HVH21    <---------LBD16<---------ANAC46<---------ANAC58          <---------YAB1 <---------REM1(1)--------->GLK1(1) <---------HSFC1(2)       <---------ANAC58<----------DOF2       <-   tggatgtagccttgacgcagaaaccctaattttccggaagcgtccttgcttgttgtttcaattgcttaattgagaatctctttggaactatgaaagtctt  11267600                                                                     <---------MYB52(1)                                                                    <-------GAMYB                                                                   <---------ANAC46                                                                   <---------ANAC58                                                              <---------ARR14(2)                                                     <---------TOE1(3)                                                     <---------TOE2(3)<---------ANAC46             --                                <---------ANAC58    <-----------GT1<---------ANAC58               ---           <---------AtMYB61    <---------ANAC58    <---------DOF5.7(2)                         <---- -------->GLK1(2)    <---------ARR14(2)      <----------DOF2  --------->ARR14(2)         ----------->GT1 --------GLK1(2)     --------->ARR14(2)  ---------->ID1  ----------->GT1<---------ANAC46----------->GT1   agaatctctcgttttggtgaaagtatcccattttgcttaatttgttcctttgtttaacgttgtgaatttgcgttgtgtagaaaatgccaaaggttaaaac  11267700  Previous    Next  AGI:  At4g21105.1    Description:  cytochrome-c oxidase/ electron carrier. similar to unknown [Populus trichocarpa] (GB:ABK93339.1); contains InterPro domain Cytochrome c oxidase, subunit VIIa; (InterPro:IPR003177) Range:  from: 11265662    to: 11266982    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g21110.1    Description:  G10 family protein. similar to Os01g0857700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044856.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70987.1); contains InterPro domain G10 protein; (InterPro:IPR001748) Range:  from: 11267196    to: 11268970    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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