Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               -------->P            --------->WOX13(1)        <------ZmHOX2a(2)           --------->MYB46(3)  --------->LBD16            --------->ZAT2        --------->YAB1    <---------ARR14(2)              --------->At4g35610        ------->GAMYB     --------->ARR14(2)       --------->ARR14(2) --------->At4g35610           -       --------->MYB46(3) --------->GLK1(2)    --------->ANAC58       <---------At4g35610          --      -------->P   <------ZmHOX2a(2) <---------ARR11(3)   <---------ZAT2 <-------TEIL           <----    --------->MYB46(3)   <---------GLK1(2)     --------->ANAC58 ---------->DOF2            <---------YAB1 ------>RAV1(1)   --------->ARR14(2) --------->ARR11(3)   <---------At4g35610 --------->YAB1---------   acataaacaaccatcaaccagatcagagaatcccagagagatcatacaaacccaatactcagctctcaaagcagatgcaatgagagtagaactattataa  11265100     --------->LBD16    <---------ANAC58    <---------ANAC55(2)    --------->ANAC55(2)    <---------ANAC58 ------>MYB46(1) ------>MYB83 <---------ARR14(2)            --------->TOE2(3)                     <----------ID1 --------->ARR14(2)            --------->TOE1(3)        --------->ANAC58        ----------->GT1 -------->WOX13(1)      ------>ZmHOX2a(1)               --------->ANAC58      ---------->DOF2 ------->AtMYB61   <----------DOF2                      --------->ANAC46 ---------->DOF2 -------GT1       <---------ANAC58            <-----------GT1     <---------ETT(2)           <------ZmHOX2a(1) >YAB1            <---------ANAC58---------->DOF2    <---------REM1(2)----------->RAV1(1)---------->DOF2   accaatccgtgataaaactagctttcctaagaaccctaaaccccaaattaacatctacacacaataggtagacaacaaaggaaagaaaaaaaaaaggata  11265200                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                            ---------               ----------->RAV1(1)                                                         <---------RAP2.6(3)            --------->ANAC58                            --------->ANAC58                  <---------ANAC55(2)            --------->ANAC46                            --------->ANAC46       <---------DEAR3(2)            --------->ANAC58                          ------>NtERF2            <------MYB83<---------            --------->ANAC55(1)                      --------->ANAC46          <------MYB46(1)      <            <---------ANAC55(2)                     --------->HSFB2a(2)        <---------MYB46(3) <--            --------->ANAC55(2)                     <---------HSFB2a(2)       <---------DEAR3(1)-----       <-------TEIL           --------->ARR11(3) <---------ARR14(2) ----------->HVH21     --------->RAP2.6(2)   ----------->GT1   --------->YAB1   <------ZmHOX2a(1) --------->ANAC58     <--------P   --------->ANAC55(2)   gagcgaagttacatacgcaacaatgagattgagttcttgaggacttgtgaagttcccgacgcaagagtgagtgacacaggtcggtttctgagccgtaacg  11265300                                                                                <-----------GT1                                                                             <---------HSFC1(2)                                                                             --------->HSFC1(2)                                                                             --------->HSFB2a(1)                                                                             <---------HSFB2a(1)                                                                      <-------MYC2                                                                      ------->MYC3                                                                      ------->MYC2                                                                      <-------MYC3                                                                     --------->ANAC58                                                                     <---------O2                                                                     --------->TGA1a                                                                     <---------TGA1a------>NtERF2                                                                     ===============================bZIP_DOF                                                                     --------->O2   --------->LBD16                                                                     --------->ANAC55(2)                                                                  ------->GAMYB<-----------GT1 ->MYB52(1)                                                       =============MYC_MYB ->ARR14(2)                                                      <---------ALFIN1>>>>>>>>>>E2Fb --ARR14(2)                                                      <---------MYB52(2)--------->ANAC46 - -->HVH21 --------->ANAC58                           <----------DOF2 --------->ANAC58               < --HVH21  --------->ANAC58                           ==========================bZIP_DOF            -- ------NtERF2                 --------->HSFB2a(2)   <---------ANAC58 --------->ANAC46         <------ -------ANAC46        <<<<<<<<<TBF1            --------->ALFIN1----------->RAV1(1)<---------LBD16  -- -->GAMYB--------->SPL7       <---------HSFB2a(2)   <---------ANAC58 <---------ANAC55(2) <----------DOF2   gcgtagttccatacgctcatcttcttcttcgcccagaaaaaaactaggggttttgctttctattgcaacacacgtgagaaatttcccgcctcttttatac  11265400                                                                                         --------->ANAC46                                                                                         --------->ANAC58  --------->GLK1(2)                                                                      --------->ANAC58 -------->HSFC1(2)                --------->AHL20(2)                       <------ZmHOX2a(1)    ----- ---------HSFC1(2)          ----------->GT1                               *TSS      >>>>>>>>>TBF1 ---->MYB46(1)         <---------AHL20(2)                      ---------->DOF2<------NtERF2 --------- -----GT1         <---------TOE2(3)              --------->CCA1(2)       ------------------------>ANAC81 ---->MYB83   <----------DOF2----------->GT1---------->DOF2 --------->AtLEC2<---------DEAR3(1)<------   caagcttctgggttctctttgagatttaaacgggaaaaaaataagagaaagagacggagacgatgcaaagggagagaggaggcgaagaagaacgcaacag  11265500                                                            <------MYB83                                                            <------MYB46(1)                                                           <---------AtMYB61                                                           --------->MYB111(1)                                                           --------->MYB59                                                           --------->MYB46(2)                                                         <---------MYB52(1)                                                     <---------LBD16                                                 <---------HSFB2a(1)                                                 <---------ANAC58                              <-----                                                 --------->HSFB2a(1)                         <-------        --------->MYB46(3)                       <---------ANAC58                            <-------       --------->RAP2.6(3)                      <-------TEIL<---------ANAC46                 <-------      <---------ARR14(2)                        --------->SPL7                               --------      --------->ARR14(2)                      <---------SPL7----------->GT1                 <--------      --------->MYB52(1)                     <---------DEAR3(2)                           --------->LBD16 ------>GT1     <-------TEIL<------------CBF--------------->AtSPL3                      ----------->RAV1(2) -->RAV1(1) <---------DEAR3(1)              <---------------AtSPL3          <---------AHL20(2) ------ -----RAV1(2)<---------DEAR3(2)        ---------->DOF2 --------->LBD16     --------->ICU4<---------LBD16   gttaagaagaacggccggttcagaacacaaaattgaaattttaaagacggtacgttccggtttggtatataactggaattaataggtttaccctggatct  11265600        ------>NtERF2      --------->ATERF1(1)      <------NtERF2     <---------ATERF1(1)              ------->GAMYB                                            ------   ------>NtERF2                    ------>MYB83                                               <----- ----MYB59                          ------>MYB46(1)                                           ------- --ARR14(2)                         -------->P                                               ------>MYB46(1) --ARR11(3)           --------->TOE1(2)                                  ---------->ID1      ------>MYB83 --AGP1<---------ATERF1(1)         ------>MYB46(1)            *TSS     <-----------RAV1(1) --------->AtMYB61 ->ARR14(2)     --------->YAB1     ------>MYB83              <----------DOF2               <---------SPL7 -CCA1(2) ------------>CBF         <---------ALFIN1         <----------DOF2       <-----------TGA1--- >ZmHOX2a(2) <------------CBF   --------->ANAC46            <---------DAG2        <-----------HVH21   aattcggcccggcccaattgataacattcgataaacccaaccctaagaagactagttcatcgccttttgtattttgttgttcttcgtcatcgacctacgc  11265700                                                       --------->HSFC1(2)                                                       <---------At4g35610                                      --------->AHL20(2)        --------->ARR11(3)    <---------ARR11(3)                <---------AHL20(2)  --------->At4g35610    <-----------GT1       <---------CCA1(2)            <---------HSFC1(2) --->At4g35610           ------>ZmHOX2a(1)          <--------P  <---------ARR11(3) ----At4g35610          <---------ANAC58         <---------TOE2(2)       --------->TOE1(1) -->ANAC46              <---------ANAC58         <---------TOE1(2)      ------>ZmHOX2a(1)         --- --->NtERF2             --------->TOE2(3)       <-----------RAV1(2) <-----------GT1   <---------YAB1   tgcgattatctctccctctcaaaattccttatctcgtcgattaatttctctcaggtaagcttctgagatttttcctcgtagatcgattttgatttcgcat  11265800                       <---------MYB52(1)                      --------->TOE2(3)                     ----------->GT1               <------MYB83               <------MYB46(1)              <---------TOE2(2)              <---------TOE1(2)             <---------MYB52(1)                                                      ------>MYB46(1)            <-------GAMYB                                                            ------>MYB83           <---------ANAC58                                                        <---------MYB59           <---------ANAC58     ---------->ID1                                     --------->TOE2(3)        <----------DOF2--------->DOF5.7(2)                 --------->TOE2(3)--------->YAB1       <--- ------>WOX13(1)    --------->ICU4                      --------->WOX13(1) <---------YAB1       <----   caatcgggttctttcgttggtaatcgttaattttgtccattttttaaaaggtttgtgtcaatctcaaatttcagagaatgataaacctaatttgtttccg  11265900                                       --------->At5g28300          ==========================HOX2a_HOX2a                           <---------LBD16                         <---------GLK1(1)                       <---------AHL20(2) --------->DAG2 <-------GAMYB                         <-----                      --------->AHL20(2) ---------->DOF2<---------ANAC58               <---------YAB1                   ------>MYB83     <---------At5g28300 <---------ANAC46          --------->GLK1(1)                   ------>MYB46(1) <-----------GT1      <---------ANAC58          <---------GLK1(1)   <---------MYB46(3) <---------AHL20(2)<---------MYB52(1)  --------->ATHB12<---------REM1(1)  <----- ------MYB52(1)  <---------MYB59<---------GLK1(1) <---------AHL20(2)------>ZmHOX2a(2)  ============== ---GAMYB     <-----------GT1   --------->GLK1(1) <---------YAB1  --------->ARR11(3)   ------>ZmHOX2a(1)   ttagattgttgaaatttgacctaatttaatcgggatttcaccgtaaagttttttaattgcgttgatttgatctctgcgatgtagaaatcctaattggata  11266000  Previous    Next  AGI:  At4g21100.1    Description:  DDB1B (DAMAGED DNA BINDING PROTEIN 1 B). Identical to DNA damage-binding protein 1b (DDB1B) [Arabidopsis Thaliana] (GB:O49552;GB:Q570Q9); similar to DDB1A (UV-damaged DNA-binding protein 1A) [Arabidopsis thaliana] (TAIR:AT4G05420.2); similar to DDB1A (UV-damaged DNA-binding protein 1A), DNA binding [Arabidopsis thaliana] (TAIR:AT4G05420.1); similar to DNA damage-binding protein 1 (UV-damaged DNA-binding protein 1) (GB:Q6E7D1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40391.1); similar to DNA damage-binding protein 1 (UV-damaged DNA-binding protein 1) (High pigmentation protein 1) (GB:Q6QNU4); contains InterPro domain WD40 r Range:  from: 11258772    to: 11265474    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g21105.1    Description:  cytochrome-c oxidase/ electron carrier. similar to unknown [Populus trichocarpa] (GB:ABK93339.1); contains InterPro domain Cytochrome c oxidase, subunit VIIa; (InterPro:IPR003177) Range:  from: 11265662    to: 11266982    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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