Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->ANAC58                                     --------->ANAC58                                     --------->AtLEC2                                     --------->ANAC46                                     <---------ANAC55(2)                                     --------                                     --------->ANAC55(1)                                 --------->DAG2 --------ALFIN1            ----------->GT1                      ---------->DOF2         ---------->DOF2 ------->ANAC46          ---------->DOF2   --------->ZAT6     <---------------AGL15  ------->GAMYB ---DOF2            ------>NtERF2    --------->ANAC55(2) <----------DOF2            --------->MYB46(3)   cacacattgacaaatgtctctctgcccaaaagttaaatcacgcaaacagtacatgagctctttactaaaagcagagaacaaattcaaccaaaaagttgta  11258200                                                                                                  ---                                                                                         ------>NtERF2                                                                                         <---------SPL7                                                                                         --------->ORA47(1)                                                                                        --------->RAP2.3(2)                                                                                        --------->RAP2.3(3)                                                                                        --------->DEAR3(1)                                                                                        <---------ANAC46                                                                                       --------->ORA47(2)                                                                                       --------->RAP2.3(1)                                                                                       <------NtERF2                                                                                       --------->DEAR4(2)                                                                                       --------->ATERF1(1)                                                        <---------YAB1                <---------RAP2.3(1)                             --------->ARR11(3)       <---------ICU4                  <---------RRTF1(1)                             <---------ARR11(3)       --------->YAB1                  ------>NtERF2                            <---------GLK1(1)      ------>MYB83                       <---------ATERF1(1)                <-----------GT1 <----------DOF2    ------>MYB46(1)                   <---------DEAR3(1)      <---------TOE2(3)     <---------At4g35610  <---------MYB59                  <-----------RAV1(1) --->GT1  ----------->GT1   --------->GLK1(1)  --------->GLK1(2)        --------->ARR11(3)     <XXXXX   aacagattgagatagtttatacctcttgggagctctttaacaatgcgagaacctaatcttgatagcctatggaagaccatgtttttggcgccgtccaaag  11258300                                              --------->ZAT18     <-----------ARR10                 --------->ANAC58             <---------ZAT18     --------->GLK1(2)                 --------->ANAC58         --------->ATHB12--------->ANAC58   <---------HSFB2a(2)     <----------DOF2               --------->TOE1(3)      --------->ANAC46   --------->HSFB2a(2)    < ------>CCA1(2)  --------->ANAC46  --------->TOE2(3)      --------->ANAC58--------->ARR11(3)       -- XXXXXXXXXXXXXXXMIR407        --------->AHL20(2)   --------->YAB1<---------GLK1(2)                <--   gtataagctttaaacctcgaagcaattcaaaattaaacctaaaatgagtgcaaacaaaataagccaagaatctaaacatctggaaacagaaacattttct  11258400                                                                     <---------HSFB2a(1)          <--        --------->MYB52(1)                                  <----------DOF2                       <-- ---------At4g35610                                         <---------DAG2    ---------->DOF2     --- ------->LBD16  --------->GLK1(2)                        <-----------GT1<-------TEIL              --- ---------RAV1(2)         --------->YAB1           ----------->GT1   --------->HSFB2a(1)     <-------   ccaggtgatataacgaagaatcgacgaatcaaaaatgaacacagagaagagaaaggttattactttttgaaaggttcgacaaaagcagaggtttttgggg  11258500                                            =====================bZIP_DOF                                            ================================MYC_MYB                                            <---------ANAC58                                            <---------ANAC58                                            <---------TGA1a                                           --------->SPL7                                           <---------TOE1(2)                                         <---------SPL7                                        <---------ANAC58                                        <---------ANAC58           ------>MYB46(1)                                       --------------->AtSPL3      ------>MYB83                                   <---------TOE1(3)        --------->AtMYB61         <---------At4g35610                                   <---------TOE2(3)        <---------MYB59           --------->ZAT2 -------ZAT2                  <---------ARR14(2) <---------ANAC46  -------->P         --------->At4g35610 -------At4g35610             --------->ARR14(2)<------NtERF2    <---------MYB59      <---------ZAT2 ------>ZAT2           ---------->DOF2 <-------TEIL   ---------->DOF2   <-----------HVH21          *TSS ------>At4g35610      ===============================bZIP_DOF------>MYB46(1)       <-----------RAV1(2) --LBD16    <------ZmHOX2a(1)<------ZmHOX2a(1)--------->ALFIN1------>MYB83   ---------->DOF2   <-----   agctcgaagatggaggaaaatgagtaaaagaggatttagggttcgtacgtggcgaagaaagaccaaacctactccgtcgcaaagtctcagctgattactt  11258600                                                                                  <------ZmHOX2a(2)                                                                                 <-----------HVH21                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                                 <-----------ARR10                                                                               --------->LBD16                                                                           --------->ARR14(2)                                                                           --------->MYB52(1)                                                                           ------>MYB83                                                                           <---------ARR14(2)                                                                           ------>MYB46(1)                                                                         <---------MYB52(2)                                                                         <---------MYB59                                                                         <---------MYB46(2)         -                                                                        --------->DEAR3(2)          <                                                                        ----------------->AGL1      <                                                  <---------ETT(1)     --------->SPL7          <-----                                               <---------ARR14(2)    <---------SPL7    ------------>CBF       ----------->RAV1(1)                    <---------SPL7       --------------->AtSPL3    <------- -----DOF2      --------->GLK1(1)   --------->KAN4(2)              <---------------AtSPL3   ---------   tctctcttccaccagaagaattctaaacccttctggtttattcttcgacgttccgacaaatttctcaaaaccgtaccgaaccggatcagaccaatttaaa  11258700                                                                              ------->TEIL        ---                                                                            --------->YAB1 <---------AHL20(2)     <---------O2                                                     --------->ANAC46     --------->AHL20(1)     --------->O2                                                     --------->ANAC58     --------->AHL20(2) --------->GLK1(2)                                             <-----------ARR10           <---------AHL20(1) -------->ARR14(2)                                             <---------ARR14(2)         --------->YAB1 ---------GLK1(2)                                              --------->ARR14(2)        <---------YAB1 ---------ARR14(2)                               <-----------GT1      --------->ANAC58  --------->AHL20(2) ------GT1                                <-----------GT1      --------->GLK1(2)        <---------AHL20(2) --AHL20(2)                         <---------DAG2             --------->ARR11(3)     <---------YAB1 >AHL20(2)                          <----------DOF2           <---------GLK1(2)    <---------YAB1----   ccgattctcgtggcacttgtgttttgctaagagaactacttttttttcatgttacaaaactttagaatcttcacacaatgaaactcttattaatataatc  11258800                                                                                              -------                                                                                            ---------                                                                                            ---------                                                                                        <---------MYB52(2)                                                                                        --------->MYB46(3)                                         ----------->GT1                          -------------------                                       ---------->DOF2                           ---------->DOF2-----            <---------YAB1          --------->ANAC58                          --------->HSFB2a(2)          ----------->GT1           --------->ANAC58                    <---------GLK1(2) --------->MYB52(1) --->ZmHOX2a(1)                  <---------ATHB12         ------>ZmHOX2a(1)   <---------HSFB2a(2) ----->TOE2(3)            --------->WOX13(1)  ---------->DOF2       ---------->DOF2----------->GT1   ctcaaaatcgcattgttatacaaattgtctatcaaatcaagaaaagaaaaaagacaactcctcaaaaccaaaaagattgtcgagaaagtaacaaacgaaa  11258900                                                                                               ------                                                                                              <------                                                                                              <------ZmHOX2a(2)                                                                                              -------                                                                                             <-------                      <----------DOF2                                                        <-------                     <---------ANAC58                                                        --------                     <---------ANAC58                                                        <-------                 <---------GLK1(1)                                                           --------      <------ZmHOX2a(1)                                                                      -------- --->DOF2       <---------ARR14(2)                                                           <------- >ANAC58        --------->ARR14(2)                                                          --------- >ANAC58 --------->ARR11(3)              --------->ARR11(3)                       <---------CCA1(2)-- ----->ANAC81 ----------->ARR10          <---------ARR11(3)                    <-------TEIL <-------- ---->DAG2<---------ZAT2    --------->ZAT14                         <---------ALFIN1  <----------DOF2   ggggaagaggagagcttggatttgcttcagtgaagcctagtgagttcttcaactctcttgcacaactcttccacttgaacatccatacctttggagatct  11259000 >ZmHOX2a(2) ---GLK1(1) -->GLK1(1) --ARR14(3) --ARR14(2)                                                       <---------LBD16 ->ARR14(3)                                         <---------MYB52(2) ----ARR10                                         --------->ANAC46     <---------ARR14(2)        <-- ->ARR11(3)                                        --------->ANAC58 --------->LBD16            ------ ->ARR14(2)                                        --------->ANAC58 <---------At4g35610       <------ZmHOX2a(2) --ARR11(3)                                    --------->AtLEC2<---------ANAC58               ------- >GLK1(1)    <---------At4g35610        --------->ARR11(3)     <---------ANAC58     <---------MYB46(3) ---->ZmHOX2a(1)                        <---------ARR11(3) <----------DOF2 <----------DOF2   -------- -GLK1(1)    --------->At4g35610      --------->MYB59 <-----------GT1   --------->ARR14(2)   <-------   cctccatcttacctctgctcaaatccaagaacgattcaataaggtctccatccaagtaaccctttgcttccgcagttcttttctcgttgttgaacgatct  11259100  Previous    Next  AGI:  At4g21090.1    Description:  adrenodoxin-like ferredoxin 1. similar to adrenodoxin-like ferredoxin 2 [Arabidopsis thaliana] (TAIR:AT4G05450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65192.1); contains InterPro domain Adrenodoxin; (InterPro:IPR001055); contains InterPro domain Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); contains InterPro domain Ferredoxin; (InterPro:IPR001041) Range:  from: 11256470    to: 11258599    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g21100.1    Description:  DDB1B (DAMAGED DNA BINDING PROTEIN 1 B). Identical to DNA damage-binding protein 1b (DDB1B) [Arabidopsis Thaliana] (GB:O49552;GB:Q570Q9); similar to DDB1A (UV-damaged DNA-binding protein 1A) [Arabidopsis thaliana] (TAIR:AT4G05420.2); similar to DDB1A (UV-damaged DNA-binding protein 1A), DNA binding [Arabidopsis thaliana] (TAIR:AT4G05420.1); similar to DNA damage-binding protein 1 (UV-damaged DNA-binding protein 1) (GB:Q6E7D1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40391.1); similar to DNA damage-binding protein 1 (UV-damaged DNA-binding protein 1) (High pigmentation protein 1) (GB:Q6QNU4); contains InterPro domain WD40 r Range:  from: 11258772    to: 11265474    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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