Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <------NtERF2                                                                                           <---------HSFB2a(2)                                                                              <---------TOE1(3)  ----                                                                          <----------DOF2  --------->HSFB2a(2)                                                                          =======================bZIP_DOF                                                                       <---------AtMYB61  <---------LBD16                                                                   <---------ANAC58       <---------ANAC46                                                                   <---------ANAC58     <-----------HVH21                                              --------->ZAT6   --------->CCA1(2)       <---------O2                     <---------ARR11(3)     <-----------GT1   --------->ARR11(3)       ==============                 ---------->DOF2   <----------DOF2            <---------ARR14(2)       --------->TGA1a          --------->WOX13(1)       <---------DAG2   <---------ETT(2) --------->ALFIN1  <---------TGA1a        <---------YAB1<------ZmHOX2a(2)   <---------ANAC58    --------->ARR14(2)       --------->O2 <---------TOE2(3)   --------->ARR11(3)   <---------ANAC58   <------ZmHOX2a(1)<---------TOE2(3)<-----   actagggtttatcaatcgacaaagatcgaagaacacactttatttcttactctatcgacgagaggatatgggtgtggtttagggtttcgacgtcgggaac  11227800                       <---------LBD16                   <---------ARR11(3)                   --------->TOE2(3)                   --------->ARR11(3)    <---------AHL20(2)          <----------DOF2      <---------TOE2(3)       --------->ANAC58            ---------->DOF2 ----->ICU4        --------->ARR14(2)    --------->AHL20(2)---------->DOF2<---------------AGL15 ====================bZIP_DOF ---------->DOF2          --------->ANAC58   ------>ZmHOX2a(1) ----At4g35610    <---------ALFIN1    ------->TEIL    ------->TEIL     ---------->ID1              --   tgatgaattcttctttgcccagaccttcggattaaagatgaatataaataaaactgaacgtaaaagaaaacttgtcctacaagaagaaagaaatattcta  11227900                                             <---------ANAC58                                             <---------ANAC46                                             <---------ANAC58                                         ------->MYC4                                         <-------MYC3                 <------MYB46(1)         <-------MYC4                 <------MYB83            ------->PIF5               <--------P                ------->MYC3               ===================================MYC_MYB              ====================================MYC_MYB             <------MYB46(1)             <-------MYC2             --------->MYB55(2)          <-------PIF5             <---------MYB46(3)          ------->MYC2             <---------DEAR3(2)         --------->O2             <------MYB83               <---------PIF3(3)                               --------->ANAC55(2)            <---------DEAR3(1)          --------->ANAC46                                <---------ANAC46            <---------DREB2C(2)         --------->PIF3(3)                       ---------->ID1     --------->ALFIN1                   <---------O2                        <----------DOF2   <------    --------->LBD16                     ===============================================bZIP_DOF -----   <---------ANAC58                     --------->TGA1a                <---------MYB52(1)     -------   <---------ANAC58         <---------WRKY18(1)                       <-------GAMYB     <---------ANAC58   <---------ANAC46    <---------TOE1(3)======================================MYC_MYB   <---------ANAC58  <---------DEAR3(1)   <---------TOE2(3)<---------TGA1a               --------->At5g28300--------->LBD16 <---------PCF2<---------MYB52(1)       <---------bZIP60(2)        <---------At5g28300 <---------LBD16 ------->ZAT18<-------GAMYB--------->WRKY38(1)                     <---------LBD16<----------DOF2   <   gtgggccgtggaagtcggttggattgaggttgactaaaaaccacgtggcttgaaacatacaatttcattcacggttaactttgtctttttccgtagtggt  11228000                                                                                            ---------                                                                                            <-------TEIL                                                                                           --------->DOF5.7(2)                                                                                        ------->TEIL                                                                                    <-------MYC4                                                                                    ------->MYC4                                                                                    ------->MYC2                                                                                    <-------MYC2                             --------->ANAC55(2)                                    <-------MYC3                             <---------ANAC55(2)                                    ------->MYC3           --------->REM1(1) <---------ANAC58                                      <---------ANAC55(2)  <---------ANAC55(2)   <---------ANAC58                                           --------->O2  <---  --------->ANAC55(2)   <---------ANAC58                                           --------->ANAC55(2) ---MYB46(3)--------->TOE2(3)<---------ANAC58                                      --------->TGA1a <- ---->ICU4------>MYB83 <-------TEIL       --------->DEAR3(1)                       <---------O2 ----- ---->GT1 ------>MYB46(1)    <---------ANAC46      --------->YAB1                  <---------TGA1a <- -----------GT1---------->DOF2         <-----------GT1    <-----------HVH21       ------------>OsbHLH66   tattacataacctacattaaaccgatgcgtttcgtatcaattcaccgaagaaatcaaaactgttagagcaactccaatgtcgaacacgtgtacgttcacc  11228100         <---------GLK1(2)         <---------ARR14(2)         --------->ARR14(2)        <---------At4g35610    <-----------HVH21   ----------->HVH21  <-------MYC3  ------->MYC3  ------->MYC2  <-------MYC4  ------->MYC4  -------->ABF1  <-------MYC2 --------->O2 --------->ANAC46 --------->TGA1a --------->ANAC55(2) <---------TGA1a            --------->ARR11(3)                           ------>MYB46(1) <---------O2              <---------CCA1(2)                             ------>MYB83 <---------ANAC55(2)    <---------ZAT2   <---------AGP1                --------->DEAR3(1) ===========================================MYC_MYB                   --------->DEAR3(2) >WRKY38(1)             --------->At4g35610                           --------->MYB46(3)           -- ------ALFIN1           <---------At4g35610------>ZmHOX2a(2)   <---------YAB1                     *TSS --------ALFIN1<---------TOE2(3)   <-----------RAV1(1)        --------->AHL20(2)     ---------->DOF2 ---->MYB46(3) <---------TOE2(2)   <---------MYB46(3)         <---------AHL20(2)  ------------------- -----------OsbHLH66   ------>NtERF2<-------GAMYB--------->At4g35610<-----------GT1 --------->AHL20(2)   cacacgtgtcagatacttaggttgccagcttatcttgctgttggatctatatgctgcaacgtattaatataaaccgacctcgaaaataaaagagagaaga  11228200                                                                                       --------->MYB52(1)                                                                                      ------->GAMYB                                                                                     <---------MYB111(1)                                                                                     <---------MYB46(2)                                                                                     <---------MYB52(2)                                                                                --------->AtLEC2                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                            ------>NtERF2                                                                            <------NtERF2      ------>ZmHOX2a(2)                                                    --------->RAP2.6(2)     <------ZmHOX2a(2)                                                     ------>NtERF2     --------->GLK1(1)                                                    <---------ATERF1(2)    <---------AGP1                                                        <---------ANAC58    --------->ARR14(2)                                                    <---------ANAC46 --------->ANAC58    --------->ARR11(3)                                                    <---------DEAR3(1)       <-    <---------ARR11(3)                                                    <---------RAP2.6(2)  ------    <---------ARR14(2)                                               <---------ICU4  --------->MYB46(3)   <------ZmHOX2a(1)                                      --------->ATHB12--------->ATERF1(2)-------- -------->DOF2                    <---------TOE2(3)    <---------ANAC58   <---------ANAC58 --------->ANAC58 ----->ANAC81         --------->YAB1                   <---------ANAC58  --------->RAP2.6(3) <-------   gaaaaggatctcaatccaattgaatcatagcaaattaagtttcgcattcgaagtttttcttgatttgataaaaatggcggccatgcaactaacaagaacc  11228300                                                                                                 <---                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                          ------>NtERF2                                                                                          <---------ATERF1(1)                                                                           --------->ANAC58<---------ZAT2                                                                  ---------->DOF2        <---------ALFIN1                          --------->LBD16                       --------->LBD16--------->At4g35610                         <---------LBD16                       --------->ANAC46<---------At4g35610      <------MYB46(1)    --------->LBD16                       <---------HSFB2a(2)       --------->DEAR3(1)      <------MYB83      <---------LBD16                        --------->LBD16<---------ARR14(2)<----    <--------P      <---------GLK1(1)      --------->ARR14(2)  --------->HSFB2a(2)    --------->ANAC58 ---------DOF2      <----------DOF2      --------->LBD16      <---------HSFB2a(2)     --------->ANAC58 --->MYB46(3)      <---------ANAC58      ------>NtERF2        <---------LBD16 --------->ARR14(2)<---- ->ARR14(2)        <---------ANAC58    <---------LBD16        --------->HSFB2a(2) --------->At4g35610 --ARR14(2)   ---------->DOF2    ---------->DOF2      <---------At4g35610  --------->ANAC58--------->ZAT2   gctctagttggtctctcaaaggctttccctggaatcaaagctccggctactctcgctgcttcttcccggaaagtctctcgcatctgcttcgccacctccg  11228400 ------MYB52(1)                      <---------YAB1 >DEAR3(1)                        <---------YAB1 -ALFIN1                 --------->ARR11(3) >AtMYB61                <---------ARR11(3) -------HVH21           <<<<<<<<<RAP2.2          ----------->GT1                   <---------ANAC55(2) ---GAMYB  <-----------HVH21 <-------TEIL        --------->YAB1           ------->TEIL        <------   ttagccaaaacgaggtcacgatttttagatattcatatgattatagaacaagagtaattttgttttagttctcatgtatttgatcatgtgagagttttga  11228500                        ---------->DOF2                                          --------->GLK1(1)                 ----------->GT1            <-----------GT1                      --------->CCA1(2)                 <---------ANAC55(2)        <---------AHL20(2)                  --------->ARR11(3)          <---------ANAC55(2)        <---------TOE2(3)                ------>ZmHOX2a(1) --------->ANAC58--------->ANAC58   <-----------GT1                  <---------LBD16    <-------TEIL --------->ANAC58--------->ANAC58   --------->MYB52(1)   <-----------GT1        <---------ARR11(3) ---YAB1  --------->ANAC55(2)     <---------MYB52(2)   <---------AHL20(2)     <---------TOE2(3)   <--   ttcaagtaagtcacataagacgtaaacaaagtagcaaataacgtttttaatgtccattttaacgagacggtcctggatttaagatatcgatacatttttt  11228600                              --------->STY1(2)                        <---------ARR14(2)                        --------->ARR14(2)            --------->ATHB12                        ------->TEIL                <----------DOF2                     <---------ANAC46       --------->MYB59                   <---------ANAC46     --------->ARR14(3)                  <---------AtMYB61     <---------ARR11(3)              --------->ALFIN1       ------                <---------MYB46(3)      --------->ARR11(3)    --------->CCA1(2)              <------MYB46(1)               --------->ALFIN1         <---------ARR14(3)   --------->ARR11(3)  <---------MYB46(3)             <---------MYB46(3)       ----------->ARR10      <---------ARR11(3)<---------MYB52(1)            <---------ANAC46  <---------STY1(2)   ----------->GT1     <------MYB46(1)      <--------P       --------->ANAC46<---------CCA1(2)<---------GLK1(2)  <---------TOE2(3)  <----------DOF2<------MYB83 -------AtLEC2<-------GAMYB ------>ZmHOX2a(1)   <---------LBD16       <------MYB83       <-----------RAV1(1)   gcatagtactcgtagcggttgtggtgtatcctagctagacaagattttggtccggtttattgagatatatgtaggtgttcctttggttaacatgttggtc  11228700  Previous    Next  AGI:  At4g21020.1    Description:  late embryogenesis abundant domain-containing protein / LEA domain-containing protein. similar to late embryogenesis abundant domain-containing protein / LEA domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44310.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO66421.1); contains domain PTHR23241:SF11 (PTHR23241:SF11); contains domain PTHR23241 (PTHR23241) Range:  from: 11228198    to: 11229588    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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