Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------CCA1(2)                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                                 ------->TEIL                                                                                 <---------ARR11(1)                                                                                <---------ARR14(1)                                                                              --------->ANAC55(2)                                                                             <---------TOE1(3)                                                                             <---------TOE2(3)                                                                            <-----------GT1 --->DOF2                              <---------ANAC55(2)        <<<<<<<<<EIN3 <---------CCA1(2)   gaaattcagtctatggaatggaagcatgaaaattagacattacatatgtataaaaaaaaaaacaacaatgtatagatttaacgtatctcttattctctta  11222100                      <----------DOF2                 <---------ARR11(3)                 --------->ARR11(3)                --------->RVE1(1)                --------->CCA1(1)              --------->YAB1              --------->AHL20(2)            --------->AHL20(2)           --------->YAB1                 --------->ICU4         --------->AHL20(2)         <---------TOE2(3)                              <---------YAB1        <---------AHL20(2)      <----------DOF2                         --------->AHL20(2)     <-----   cacaagagatttaaaataatatctctttgtttgactttaatgtaatttttagtaaatccaaacaaacaaacaaaaaaaataagttctgaatactagtctt  11222200                     <---------ARR11(3)                                 <-----------GT1                     <-----------ARR10                        <---------ICU4                     --------->GLK1(2)   <------------MYB.PH3(1) <-----------GT1                    <---------GLK1(2)   <---------At5g28300   --------->YAB1                  ------->GAMYB        --------->MYB52(1) <---------AHL20(2)               ----------->RAV1(1)     <-----------GT1    --------->AHL20(2) -----DOF2<---------MYB46(3)<---------YAB1        XXXXXXXXXXXXXXXXXXXXX>MIR4221    <---------YAB1   ttttggttcgggtcgttcaacagaatctttctgaatgggattaacggttttcttctctgttaaattatcacatttcacattagctactatagaagcccaa  11222300                                                                                        --------->MYB52(1)                                                                             --------->ATHB12                                                                             -------->HAHB4                                                            --------->AHL20(2) <---------WOX13(1)                                                       --------->AHL20(2)   --------->ICU4 ------->GAMYB                                                       <---------AHL20(2)   <---------ATHB12                                    ---------->DOF2   <---------ATHB12----------->RAV1(1)<---------At5g28300                             <-----------HVH21     --------------->AGL15--------->MYB46(3) --------->TOE1(3)                      <---------AHL20(2)          ------------>CBF   --------->REM1(1)  <-----------GT1   attagaagaaaaaatgaactgttttaaattttgtcactgaaagtttctattttccaataaaatcaaatactacaacaaatgattaactaataaccgtagc  11222400                                                                     ------>MYB46(1)                                                                   --------->AtMYB61                                 ------>MYB46(1)                   <---------MYB59                                 ------>MYB83                      <---------MYB111(1)                               --------->AtMYB61                   <---------MYB46(2)                              <---------HSFB2a(1)         ----------->GT1  <----------DOF2                      --------->AHL20(2)        <----------DOF2 <-----------GT1<---------AtLEC2             ---------->DOF2  --------->HSFB2a(1)  --------->AHL20(2)------>MYB83    ---------->DOF2 --------->TOE2(3)  ---------->DOF2   ----------->GT1  <---------DAG2   aactgctaaagtcataaaagaacattaaacaaaccttcccctaaagcctccttttaaataggttaaataccaaacccctttccatgtccaaaacatactc  11222500                                                                          <---------ZAT18                                                            <---------AHL20(2)                  --------->ARR14(2)                        --------->AHL20(1)                  <---------ARR14(2)                        --------->AHL20(2)       --------->ANAC58                                     <---------AHL20(1)              <--------       --------->ANAC58          --------->AHL20(2)        --------->AHL20(2)           <---------AHL20(2)     ---------->DOF2   ---------->DOF2       ----------->RAV1(1)         <---------ZAT6--------->AHL20(2)   aagaacattaagcaaaatcaaatctgaaagaaaaaaaaaatggatgccaacacaaaaacaattttattttttgtagtgttcttcatcgatttattttccc  11222600     <---------AHL20(2)                                              <-------TEIL     --------->AHL20(2)                                          <---------AHL20(2)  --------->AHL20(1)                                            <---------AHL20(2)  <---------AHL20(1)                                            <---------AHL20(1)          <--------  --------->AHL20(2)                 --------->ZAT6             --------->AHL20(2)         <---------TOE2(3)  <---------AHL20(2)              --------->YAB1            <---------YAB1         --------->YAB1 <-- ---GT1         <---------YAB1   <---------YAB1       <---------AHL20(2)  <----------DOF2<---------AHL20(2)   ctaatattttattcgtttatgctcgtgaaatcggtatgatcactatacatctctgttttattctaataaaattcatcttttggtatcaaaatttatgttt  11222700                                  ----------->RAV1(1)                                   ----------->GT1                               --------->ANAC46                                        <----------ID1                               --------->ANAC58 <---------AHL20(2)             <---------LBD16                               --------->ANAC58 <-----------GT1                <---------At4g35610                  <---------AHL20(2)       <---------MYB52(1)                  --------->At4g35610                 <---------AHL20(1)   --------->MYB52(1)                      --------->MYB52(1)                 <---------AHL20(2)  ------->GAMYB                           <-----------RAV1(2)    <---------YAB1--------->AHL20(2)--------->MYB46(3)                    <------ZmHOX2a(1)        <- -YAB1--------->ARR11(3) ---------->DOF2--------->MYB46(3)            ---------->DOF2--------->ALFIN1 -------ANAC46   --------->AHL20(2) <---------MYB52(2)         --------->MYB52(1)  <---------ARR14(2)   atgtgtatgattttgctaatttaatttgaaagcaggcaacaaaccgctatttacatacaaacaaaaaacagagaaaggaccagcggaatggggcaaatta  11222800                                                     ----------->HVH21                                                     ----------->TGA1              --------->ANAC58                                                ------>ZmHOX2a(2)                  --------->ANAC58                        --------->LBD16        <---------At4g35610           <---------YAB1                        ----------->GT1       <---------ARR11(3)             --------->ICU4     <---- ----------------AGL1 <---------LBD16      <---------WOX13(1)              --------->YAB1      ------   gaccctcaatggaaagtttgtagcaccggaaaaattcaatctccgattgatctcactgacgaaagagtcagtcttattcatgatcaagccttgagtaaac  11222900                                                                                             --------                                                                                            <--------                                                                                          <----------                                                                                          --------->WOX13(1)                                                                                          --------->YAB1                                                                                        <---------AHL20(2)                                                                                       --------->YAB1                                              ----------->GT1                         <---------YAB1                 --------->At5g28300         <---------TOE2(3)                       --------->AHL20(2)                <----------DOF2              <---------YAB1                          <---------AHL20(1)              <---------At4g35610            <---------TOE1(3)                       --------->AHL20(1)        --------->At4g35610               <---------MYB52(1)                         <---------AHL20(2)        --------->ZAT2                  <---------bZIP60(1)                         --------->AHL20(2)        <---------ZAT2               ----------->TGA1                              <---------YAB1   --------->ANAC46     ---------->DOF2 --------->bZIP60(1)                     --------->ICU4 -----ICU4    --------->At4g35610    ----------->HVH21       <---------AHL20(2) <---------YAB1     -- --->ICU4<---------GLK1(2)       <------ZmHOX2a(1)    <----------DOF2         --------->ANAC55(2)  <-   attacaaaccagcttcggctgtaattcaaagtagaggacatgacgttatggtaaaacttttatttcattttagttatctcacatgattatattaatcata  11223000  Previous    Next  AGI:  At4g21000.1    Description:  carbonic anhydrase family protein. similar to carbonic anhydrase family protein [Arabidopsis thaliana] (TAIR:AT4G20990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23638.1); contains InterPro domain Carbonic anhydrase, eukaryotic; (InterPro:IPR001148) Range:  from: 11222540    to: 11223767    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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