Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------YAB1                                                             <---------TOE2(3)                   ----                                                             <---------TOE1(3)                <------             ------>MYB83 <--------HAHB4                  <---------AHL20(2)                  <------             ------>MYB46(1)                        <------MYB83                              <------        --------->RAP2.6(2)                         <------MYB46(1)                          -------- <---------YAB1           --------->YAB1           --------->MYB59                       <---------MYB52(1) ----YAB1------>NtERF2    <---------ICU4      <---------AHL20(2)              --------->MYB52(2) <--- -GT1  --------->MYB46(3)<---------ATHB12    --------->AHL20(2)        <----------DOF2 <---------MYB46(3)   actcttatagccaccaaattttcttgaatcattttgcattagttttataaaatttggtattttatggttccaacttttgtttgtttcggtcgtttggcgt  11219400                                                                            <------MYB46(1)                                                                            <------MYB83                                                                            <---------DEAR3(2)                                                                           <---------DEAR3(1)                                                                          <--------P                                                               ------>ZmHOX2a(1)                               <---------DEAR3(2)            =================HOX2a_HOX2a                               <------MYB83                  ------>ZmHOX2a(2)                               <------MYB46(1)              ==================HOX2a_HOX2a                              <---------DEAR3(1)            <------ZmHOX2a(2) ----->ARR14(2)              <---------ORA47(1)            <---------ARR11(3) ---ANAC58                   <--------P                    --------->ARR11(3) ---ANAC46                ------>ZmHOX2a(1)                --------->ARR14(2) ---ANAC58        ------>ZmHOX2a(1)                        <---------ARR14(2) -->ID1         ------>ZmHOX2a(2)                        ----------->ARR10<---------ORA47(1)    ----- ------ARR14(2) =================HOX2a_HOX2a       ----------->HVH21   ------>ZmHOX2a(1)       ------   attctcttatgagcttgatcctattgtcctggtcggtttttatctctgttaaactgacatagatcctattgtcctggtcggttttaatctctgttaaacc  11219500                              <---------------AGL15                      --------->YAB1                     <---------YAB1                   <---------ICU4                   --------->YAB1                ------->GAMYB                  <---------YAB1                 --------->TOE2(3)                <---------AHL20(2)               --------->YAB1            <---------AHL20(2)--------------->AGL15          <-----------GT1                        - ---->DREB2C(2)--------->AHL20(2)               --------->MYB46(3)                         <--------- --->DEAR3(2)  --------->ICU4----------------->AGL2    ----------->GT1         <---------------------   gacatacttcacatatatttattattataaaccccaaattagaaaactcaaccaaaatggtttttactaagcattcagttttttttttttttttttcatg  11219600                                --------->YAB1                             --------->YAB1                             <---------ICU4     --------->YAB1          -------->HAHB4                         --------->MYB46(3)     ----------->GT1        --------->ICU4                    <---------At4g35610 ----------->CBF          --------->YAB1 ------->GAMYB --------->YAB1                     ------>ZmHOX2a(1) --GT1                <-----------GT1    ----------->GT1      --------->At4g35610---------->DOF2 ---ANAC81      <---------GLK1(2)     --------->MYB52(1)   ---------->DOF2    --------->LBD16   tttccaatagtaacatcagattattaactaataatcgtagcaacggcaaaaaccatatcagaacagcagaacaaacatcccccaaaagcctcctcttaaa  11219700                                                       <-----------ARR10                                                       <---------ARR11(3)                                                 --------->ANAC58                          ------->GAMYB                                          --------------->AGL15                           --------->ANAC58                                          <---------------AGL15                           --------->ANAC58                                         --------->ANAC46                                 --------->ANAC46                                   <-----------GT1     --------->GLK1(2)                 ------>MYB83                             --------->YAB1      --------->ANAC58 ---------->DOF2        ------>MYB46(1)                ------------>CBF--------->YAB1 ---------->DOF2 <---------HSFB2a(2)     --------->AtMYB61   taggttgtctctaaacccttcaatctccaaaacataataacatactccattaagcaaaatctaatctcgaaagaagagaaacatggataccaacgcaaaa  11219800                                                                          --------->YAB1                                                                          --------->ATHB12                                                                         <---------YAB1                                                     --------->ANAC46    --------->ICU4                                                     --------->ANAC58<---------DEAR3(2)                                                     --------->ANAC58<------MYB83 --------->REM1(1)--        <---------AtLEC2                         <-----------GT1     ----------------------->TaNAC69(2)   <-----------GT1                 <----------DOF2 <---------ALFIN1  <------MYB46(1)              <--   acaattttcttcatggctatgtgtttcatctatctatctttccctaatatttcacacgctcattctgaagtcggtatgattactacatctctattgcatt  11219900                                                <---------AHL20(2)                                                <-----------GT1                                           <---------YAB1                                         ----------->GT1                                     --------->ATHB12                                     <---------ICU4                                    <---------YAB1                                   <---------ANAC58       --------->AHL20(2)           --------->ICU4 --------->TOE2(3)                 <---------ANAC58       <---------AHL20(2)           <---------ATHB12                               <---------AHL20(2)      --------->AHL20(2)         <---------AHL20(2)--------->TOE1(3)   --------->ANAC46             - --------->GT1                  --------->AHL20(2) <----------DOF2     --------->ANAC58             - -------HSFB2a(2)   --------->YAB1 <---------TOE2(3)                   --------->ANAC58           ---   ctagtaaaattaatcttttgtatcaaaattcagatttaatgatttgttattaactttaatctgaaaacagacgacgaaactccatttacttacgaacaaa  11220000                                                                                 --------->ARR11(3)            <-----------RAV1(2)                                      --------->WOX13(1)         <---------PCF5                                          --------->GLK1(1)        <----------ID1                      ---------->DOF2     --------->ARR11(3)      --------->DAG2                 --------->LBD16            <---------ARR11(3)           --------     --------->DAG2              <---------ARR14(2)        --------->LBD16       <---------ARR11(3)    ---------->DOF2              --------->ARR14(2)      <---------LBD16      <------ZmHOX2a(2) -------->ANAC58              --------->AHL20(2)  ----------->GT1--------->CCA1(2) ------>ZmHOX2a(2) -------->ANAC58       ----------->GT1<---------ALFIN1  --------->MYB52(1)--------->LBD16 <---------TOE2(3) ------>MYB52(1)    --------->ALFIN1 --------->ZAT18   <---------ALFIN1  <---------LBD16 --------->MYB52(1)   aaacggaaaagggaccagagggatggggcaaaataaatccgcactggaaagtttgtaacaccggaagatatcaatccccgatcgatcttactaacgaaag  11220100                                                    --------->At5g28300                                                   <----------DOF2                   --------->ANAC58                                                   ----------->GT1                   ----------->GT1                                                 <---------------------WRI1          --------->ANAC55(2)                                                --------->LBD16                      <---------ANAC55(2)                                                ------>NtERF2                        <---------ANAC46                                              <---------LBD16                        --------->ANAC58                                           <---------ZAT2                           <-------TEIL                                           --------->At4g35610                  <---------------AtSPL3                  --------->ANAC58         --------->ZAT2                       <---------YAB1                  --------->ANAC58         <---------At4g35610                  <---------TOE2(3) ---            <---------YAB1            <-----------GT1                           <---------------AtSPL8            --------->ICU4  --------->ANAC58<---------ARR14(2)               --------->ICU4      <--- -->DOF2  --------->YAB1    --------->ANAC58--------->ARR14(2)          ----------->HVH21    <-------   agtcagtcttattcatgatcaagcatggacaagacaatataaaccagctccggctgtaattacaaacagaggccatgacattatggtacgtaaaacttta  11220200                                    <-----------GT1                                   <---------YAB1                                 <---------ICU4           --------->TOE2(3)                                 --------->YAB1           --------->TOE1(3)                                --------->ICU4          <---------ARR11(3)                                <---------YAB1  --------->ATHB12                             <---------YAB1     <---------ICU4                             <---------AHL20(2) <--------HAHB4                             --------->At4g35610    <---------GLK1(1) <-----------GT1          --------->ICU4       <---------YAB1--------->GLK1(2) ------>YAB1       <---------ANAC55(2)       --------->YAB1  ---------->DOF2    <---------GLK1(1)   < ------YAB1        --------->ANAC55(2)   --------->ZAT6 --------->ARR11(3)---------->DOF2  <---------At4g35610 ---DOF2  <---------MYB52(1) --------->AHL20(2)<---------ATHB12<---------TOE2(3)--------->GLK1(1) <--   ttatagaattcagttattctcacttaactatattattattacaacactaatcatttgaaatcttaaaggtatcatggaaaggagatgctgggaagatgac  11220300  Previous    Next  AGI:  At4g20980.1    Description:  eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative. Identical to Eukaryotic translation initiation factor 3 subunit D (TIF3D1) [Arabidopsis Thaliana] (GB:P56820); similar to eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative [Arabidopsis thaliana] (TAIR:AT5G44320.1); similar to unknown [Picea sitchensis] (GB:ABK24278.1); similar to eukaryotic translation initiation factor 3 (eIF-3), putative [Musa acuminata] (GB:ABF69959.1); similar to putative eukaryotic translation initiation factor (eIF3d) [Oryza sativa (japonica cultivar-group)] (GB: Range:  from: 11216942    to: 11219348    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g20990.1    Description:  carbonic anhydrase family protein. similar to carbonic anhydrase family protein [Arabidopsis thaliana] (TAIR:AT4G21000.1); similar to a-type carbonic anhydrase [Lotus japonicus] (GB:CAM59682.1); contains InterPro domain Carbonic anhydrase, eukaryotic; (InterPro:IPR001148) Range:  from: 11219783    to: 11221137    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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