Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------LBD16                                                                                          ------>ZmHOX2a(2)                                                                                         <---------GLK1(1)                                             <---------ARR11(3)                          <------ZmHOX2a(2)                                             --------->ARR11(3)                         --------->ARR11(3)                                             --------->ARR14(2)                       ----------->ARR10                                 --------->LBD16                                  <------MYB46(1)                                --------->ANAC46                                 --------->MYB59                               --------->LBD16                <-----------GT1    --------->MYB46(2) -                               <---------LBD16   ------>ZmHOX2a(1)      <----------DOF2 <---------AGP1 -----DDF1              <-----------GT1      <---------ARR14(2)        <---------ANAC58 <---------ARR11(3) ----ETT(2)         <----------DOF2  ----------->GT1 <---------DAG2<----------DOF2<------MYB83      < --->ETT(2)      --------->GLK1(2)<---------MYB52(1) <----------DOF2   <---------ANAC58<---------CCA1(2)   acattgttcttgcagtgagaagcttttttcatccccgtaagtttaaaaatcctcacttttcatttatctctttgctttggagttaggttagatctcggaa  11202300                                              <---------At4g35610                                              --------->At4g35610   ----------------->AGL3                     <---------ZAT2  --------->ANAC58                            --------->ZAT2       <---------GLK1(2)  --------->ANAC58                            ----------->RAV1(2)--------->ICU4 --------->PCF2                   <---------TOE2(3)              <---------YAB1 -------->TCP15(1)              <---------AHL20(2)          <---------ANAC46 ---------PCF2                 --------->AHL20(2)       <----------DOF2                           <--   tgggacccaaatattgaatagcccatttgttcatttaatgtttttttcagctgattccctttgagtgaagattgtctcttctcactcagtagcattactg  11202400                                       <---------TOE2(3)                                       <---------TOE1(2)                                       <---------TOE2(2)                          --------->ARR11(3)                          --------->ARR14(2)                          <---------ARR14(2)         <---------WOX13(1)            --------->MYB59 <----------DOF2       --------->ATHB12   <---------ARR11(3)       <----------DOF2             --------->YAB1  <---------YAB1        ----------->ARR10   --------->DAG2        <---------MYB52(1)             <--- --------DOF2         <---------At4g35610  ---------->DOF2 <---------At4g35610<---------YAB1 --------   cattttgtttgattggggtttctcagaagatttgttcatcttaggtaaagtttctttctttagcttctgtttttttttttatcagagtgaaatttctggt  11202500                                  ----------->GT1                          <---------DAG2                          <----------DOF2                       <-----------GT1                      <-----------GT1                                                <---------ANAC58                     <---------AHL20(2)                                              <---------ANAC58                   --------->CCA1(2)                  ---------->ID1       <-----------HVH21 ---------CBF     --------->ARR11(3)       --------->ATHB12        <---------YAB1  <---------AHL20(2) ->HSFB2a(2)      <---------ARR11(3)    <------------CBF     <---------AHL20(2) --------->ARR14(2)  -   attgttgatttttgcagaaagatttaaacttttttttggtaacattgatgggttttgtcttatttcattatgttttatgtcagatttacttggggttcca  11202600                 <---------At4g35610                 --------->At4g35610                 <---------ZAT2                                                 --------->ANAC58                 --------->ZAT2                                       --------->CCA1(2)            <------MYB83--------->DAG2                             ----------->ARR10  <------ZmHOX2a(1)            <---------MYB46(3)                             <---------LBD16      --------->ANAC58           <---------DEAR3(1)      <---------GLK1(2)  --------------->AGL15   <<<<<<<<<WRKY18           <---------AtMYB61--------->MYB111(2)       <---------DAG2 --------->ARR11(1)           <--         <-------GAMYB ---------->DOF2                <---------------AGL15  --------->WRKY18(1)  --- ------>TEIL<------MYB46(1) <---------MYB46(3)        <----------DOF2<---------ARR11(3)    ------->TEIL   tgaattttctgcgttggtgagctggaaaagttgttgggattcttcaaaaactgtagctttttgggggaaaagatttgaagtcaaggaaggatgaatcttt  11202700                                                                                   ---------->DOF2         <-----------GT1                                               <---------ANAC58  --------->ARR11(3)                       <---------HSFC1(2)          <---------ANAC46        ------ <------ZmHOX2a(1)                  --------->ALFIN1    <------ZmHOX2a(1)        --------->ANAC58 -------HSFB2a(2)               ------------>CBF <-----------HVH21     <---------ANAC58        <----- ------>HSFB2a(2)       <-----------GT1    --------->HSFC1(2)<---------ICU4      --------->ANAC58   ctaggattttgttactctccatgttttttctatctgcaatggggcaacttccatcacaggacatcatggcattgcttgaattcaagaaaggcatcaaaca  11202800                                                                                                <----                 ------>ZmHOX2a(1)                               <---------AtLEC2           ---------    <---------REM1(2)                                       ------>ZmHOX2a(1)               <------NtERF2 --->YAB1       --------->TOE2(3)                   <---------MYB46(3)                    <---------ANAC46 ----ICU4     ---------->ID1                       <---------ATHB12                <---------ZAT14   tgaccctacagggtttgtccttaattcatggaacgatgagtctattgacttcaatggttgtccttcttcatggaatggtattgtctgcaatggcggtaat  11202900   <------MYB46(1)   <------MYB83                          <---------YAB1  <---------MYB46(3)                   <---------At4g35610 <---------ANAC58                   <---------At4g35610                        --------->ANAC58 <---------ANAC46                <---------At4g35610                           --------->ANAC58 <---------ANAC58                --------->At4g35610                    <---------ANAC58 -------RAV1(1)              <---------WRKY18(1)                        <---------ANAC58            < >At5g28300                 ----------->HVH21                       ---------->DOF2      <-----------HVH21   gtggctggtgttgttttggataatttgggtttgactgctgatgctgatttcagtctgttctccaacttgacaaagcttgtcaagctatctatgtcaaaca  11203000             <-------GAMYB            --------->ALFIN1            <-----------RAV1(1)          <---------ANAC46          <---------ANAC58          <---------ANAC58                            ------>ZmHOX2a(1)       <-----------RAV1(1)                           <---------LBD16   <----------DOF2                                --------->ARR14(2)                <---------ICU4 <- <---------------AGL15 --------->ATHB12           <---------ARR14(2)                --------->ATHB12 -----------------AGL2<---------ATHB12 ---------->DOF2--------->LBD16--------->GLK1(2)      ---------   attccctttctggtgtgttgccaaatgatttaggcagtttcaaaagcctccagttcctggatttatcagataatctgttctcttcttcattgcctaaaga  11203100                                     ----------->GT1                              <----------DOF2                              <---------------AGL15                              --------------->AGL15                             ----------------->AGL2                             <-----------------AGL1                             ----------------->AG       =====================HOX2a_HOX2a                                                   <---------ZAT14      <---------AGP1         <-----------------AGL2                         <------MYB83  --------->ZAT14   <--------P                <-----------------AGL3                         <------MYB46(1)       <-- <------MYB83           --------->HSFB2a(1)                                 <---------MYB46(3)   <--- <------MYB46(1)       --------->GLK1(2)                   --------->GLK1(2)--------->MYB55(2) <----- --------WOX13(1)    <------ZmHOX2a(1)        <----------DOF2              <---------AtMYB61   ------ ->DOF2<------ZmHOX2a(2)<---------HSFB2a(1)   <---------DAG2   --------->LBD16        <-----------GT1   gattggtagatcagtaagcttgaggaatctttctttatctggtaacaacttttctggtgagattccagagtctatgggtggtttgatttcacttcagtcg  11203200  Previous    Next  AGI:  At4g20940.1    Description:  leucine-rich repeat family protein. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G10020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42543.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61261.1); similar to hypothetical protein OsJ_022165 [Oryza sativa (japonica cultivar-group)] (GB:EAZ38682.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-t Range:  from: 11202739    to: 11206291    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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