Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->GLK1(2)                            <---------ANAC58                -------              ------>MYB46(1)                                 <---------ANAC58                <------              ------>MYB83                                   <---------------AtSPL8           -------             ----------->RAV1(1)  --------->ICU4      --------->AHL20(2)                      <------           --------->MYB46(3)----------->GT1        --------->TOE2(3)                  <-------GAMYB    ------>ZmHOX2a(1)     --------->MYB52(1)     --------->AHL20(2)                   ----------->GT1   caagtcctatgaaaccaacattctgacaaaacagcaaaaatgagacttcatttacataaattttgggtactgaatcagacaaattttgctgttaaaaatc  11200700                                                        --------->ANAC58          <----------DOF2                               --------->ANAC46          <---------DAG2                                --------->ANAC58    --------->ANAC46          ------->TEIL        <------ZmHOX2a(2) -->GLK1(2)             --------->ICU4           <---------ARR11(3) ---ARR11(3)         <---------ARR14(2)          --------->ARR11(3) -->ARR11(3)         --------->ARR14(2)        --------->ICU4                      <-----------GT1 -----ARR10       --------->HSFB2a(2)       --------->WRKY18(1)               <---------YAB1   taatccagacaactttttttgcagaactgatgaatttagataagtggtcaagatcaataagcaatttggccactaaaattcttattaactatgctcgaga  11200800                         <------------MYB.PH3(2)                         <---------MYB111(1)                         <---------MYB52(2)                         <---------MYB111(2)                         <---------MYB46(2)              <----------DOF2             ------>ZmHOX2a(2)       <------ZmHOX2a(2)             =============================HOX2a_HOX2a            <------ZmHOX2a(2)       --------->ARR11(3)            ==============================HOX2a_HOX2a            <---------RVE1(1)       <---------ARR11(3)         --------->GLK1(2)           --------->ARR14(3)      --------->YAB1           <---------AHL20(2)           --------->ARR14(2)      <------ZmHOX2a(1)       --------->AHL20(2)           --------->AGP1--------->MYB46(3)                --------->YAB1           <---------ARR14(3)    <---------TOE1(3)         <---------AHL20(2)           <---------ARR14(2)    <---------TOE2(3)         <---------AHL20(1)           <---------ARR11(3)--------->TOE2(3)    <---------HSFB2a(1)                        <-------           --------->ARR11(3)--------->TOE1(3)    --------->HSFB2a(1)              ---------->DOF2         ----------->ARR10------->GAMYB      <---------HSFB2a(2)                 <------ZmHOX2a(1)  ---------->DOF2        <---------MYB55(2)  --------->HSFB2a(2)         <---------ANAC46 --------->GLK1(2)   ttacaaaagttaagatcttttattccaactaccttaaggatcatgttttagaacgtttcaataaaattctaggtgacttatgaggaaaagagattatgtt  11200900                              <---------LBD16                              --------->TOE1(2)                             ----------->RAV1(2)                            --------->GLK1(2)                           --------->ARR14(2)                                         --------->ANAC58                           <---------ARR14(2)                                         <---------ANAC55(2)                 --------->AHL20(2)                                                   --------->ANAC58                 <---------AHL20(2)                                                   --------->ANAC55(1)    <---------ICU4   --------->DAG2                                        ----------->HVH21    --------->YAB1  ---------->DOF2                                   --------->ALFIN1--------->ANAC55(2) --YAB1         --------->AHL20(2)    --------->ATHB12          <---------ARR14(2)    --------->ANAC46   ttctgatcatgaagacaatttaaaaagcagaacctggaattgatttgaattttgagacgaagaagagaaccggtggagcgacccagacacgaaattggtt  11201000                    <---------ZAT6                ------->TEIL             ---------->DOF2        --------->ARR14(2)         <----------ID1             <---------ARR14(2)       ---------->DOF2     --------->ZAT18   --------->YAB1                                       *TSS   ttgaatttagaaagacaaagtagagtttgcgctctgcgaatcgccattgatgaatttcttcaaactcagagcaagttaacaattagcaaatgagagtgag  11201100                                                                                      --------->LBD16                                                                                    <---------LBD16                                                                                  ------->TEIL                                                                          <---------AHL20(2)                                                                         <---------AHL20(2)                                                                         <---------AHL20(1)                                                                         --------->AHL20(1)                                                                         --------->AHL20(2)    --------->ANAC46                                <---------ICU4    <---------AHL20(2)    --------->ANAC58                               --------->ICU4    <---------AHL20(2)    --------->ANAC58               <---------GLK1(2)--------->YAB1   --------->AHL20(2)         <----    --------->ANAC55(1)            --------->ARR11(3)  <-----------GT1--------->AHL20(2)     <-------   ttttagacgtaagtgtgtaatctcatcaaaacactcagatttttgttttttgaattatgaccccttaactattaatttattctgaacccggacatttact  11201200                                                                                   --------->PCF2                                <---------At4g35610                               <---------PCF2                                --------->At4g35610                               --------->TCP20                       -------->HAHB4                                            ----------->HVH21                       <--------ATHB1                                         <-------MYC3                       --------->ATHB12                                       ------->MYC3                       <---------ICU4                           <---------DOF5.7(2)<---------TCP15(1)        --------->ZAT6 --------->ATHB51                        <---------WRKY12  <---------TCP15(2)       <---------YAB1 --------->ICU4               <---------MYB52(1)         ------->MYC2        ---   --------->TOE2(3)  <---------AHL20(2)          --------->LBD16             <-------MYC2    ------>ZmHOX2a(1)  <---------ICU4      --------->AHL20(2)        <---------LBD16<---------WRKY38(1)--------->TCP15(1)- ------DOF2           <---------ATHB51    <---------CCA1(2)    <---------WRKY45--------->ALFIN1  <--- --AHL20(2)           <---------ATHB12    ---------->ID1      --------->WRKY18(1)<---------TCP23-----   ttcaacattatcagtagaacccaaataattggtctgatgcccttgtctcttccggtcttccctagtcaacgtagtcagcatgtgggacccattttcctac  11201300                                                                        <---------KAN4(1)                                                                        --------->KAN4(1)                                                                       <---------ARR14(2)                                                                       <---------KAN4(2)                                                            <---------AHL20(2)        <-----------GT1                ----------->GT1      --------->AHL20(2)     <---------AHL20(2)            <---------TOE2(3)    --------->AHL20(2)            <---------AHL20(2)     --------->AHL20(2)          <---------AHL20(2)    --------->AHL20(1)        <---------YAB1 ----- ------>ANAC46                   --------->AHL20(2)    --------->ARR11(3)   --------->YAB1 --------->HSFB2a(2) -------->At5g28300           <---------ICU4           <---------ARR11(3)   <---------ICU4 <---------HSFB2a(2) ------LBD16                 --------->ICU4            <---------AHL20(1)  <-------TEIL <-----------GT1 ---->ANAC46              ------>ZmHOX2a(1)           --------->YAB1   --------->ARR14(2) <---------LBD16   gcggtatttatttcgcttctacattttcctactaattaatgtggtatcaacttcaaaaatatttatttgtccgaatattcattactattttttctggatt  11201400                                                --------->RVE1(1)                                            --------->AHL20(2)                                          <----------DOF2                                       --------->ANAC58       ----------->GT1          <---------YAB1               --------->ANAC58       <---------ANAC46        --------->YAB1           <---------ANAC58<---------ARR11(3)                                 <      --------->ARR11(3)         <---------ANAC58--------->ARR11(3)                             <---- ------>GT1        <-----------GT1 --------->AtLEC2         <---------ANAC46           <---------YAB1   gttcaaaaaatcatgtttcatttactacacattttccttgcaagcttttaatatctgtattttggtgtaaataacattcactccgaactctcattactct  11201500                                                                       --------->LBD16                                                                      --------->ANAC46                                                                     --------->ZAT14                                                                     <---------ZAT18                                                                     <---------ZAT14                                                                <---------ZAT14                --------->AHL20(2)                              --------->ZAT14                <---------AHL20(2)<---------ICU4            --------->YAB1               <---------AHL20(2) --------->ATHB12       <---------AHL20(2)                       ---            --------->AHL20(2)   --------->AHL20(2)     --------->AHL20(1)                       ----    <-----------GT1              <---------AHL20(2)     <---------AHL20(1)               ------------ ---------AHL20(2)   <---------TOE2(3)                  <---------AHL20(2)               <----------- ------DOF2<---------YAB1    <-------TEIL               --------->AHL20(2)             <-----------GT1   ttttattttccctattatttatttatgtaaattcatttattgcaagtttctaccaaaatttattagaacactgcgcaattttcgcttattttcccaatgc  11201600  Previous    Next  AGI:  At4g20930.1    Description:  3-hydroxyisobutyrate dehydrogenase, putative. Identical to Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q9SUC0;GB:Q8LC25); similar to phosphogluconate dehydrogenase (decarboxylating) [Arabidopsis thaliana] (TAIR:AT1G17650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42544.1); contains InterPro domain 3-hydroxyisobutyrate dehydrogenase; (InterPro:IPR011548); contains InterPro domain 3-hydroxyacid dehydrogenase/reductase (InterPro:IPR015815); contains InterPro domain 3-hydroxyisobutyrate dehydrogenase-related, conserved site; (InterPro:IPR002204); contains InterPro domain NAD Range:  from: 11198400    to: 11201098    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version