Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ---------->DOF2                                                                     ----             <---------DOF5.7(2)                                            <-----------GT1 ---------           --------->DOF5.7(2)          <-----------GT1          ----------->HVH21          <--------          --------->TOE2(3)            --------->AHL20(2)    <---------ANAC58      --------->At4g35610          --------->TOE1(3)         ------>MYB83             <---------ANAC58  --------->TOE2(3) ----        <---------TOE2(3)           ------>MYB46(1)     ------->TEIL<---------ANAC46        --------- -------->MYB46(3)        ----------->GT1  <----------DOF2   <---------ANAC46-------->P    --------->AHL20(2)   caacaacttaaacgttaatgccaatagagagaaaaaccaaattaacttttggactatggacttgcttatgacctgtactaacctcatcagaaaatatata  11197200        <---------WRKY12                                                     <---------ZAT2        <---------WRKY38(1)                                  ------>ZmHOX2a(1)    <---------ANAC58                                         --------->LBD16 --------->At4g35610    <---------ANAC58                                       ----------->RAV1(2)    ----------->RAV1(1) ----->TOE2(3)                                         <---------YAB1        --------->ZAT2 >AHL20(1)                  <-------TEIL             <---------ICU4          <---------At4g35610 -ARR11(3)      <---------AHL20(2)                   --------->YAB1        ------>ZmHOX2a(1)      <-- ----->ANAC55(2)<---------YAB1                      <---------YAB1    --------->GLK1(1)        ------ >ARR11(3)   <---------ARR11(3)                   --------->YAB1      <---------GLK1(1)        <-----   cttaatgcgttcaacgatattattccaagcttcatccacagttatatcaacatcatcatcatcctgagactgaattcctagctgcaacatgaatagtatt  11197300                                                                                           <---------At4g35610                                                                                           --------->At4g35610 <----------DOF2                                                                          ----------- <---------DAG2                                                                         --------->At4g35610 ---------GT1                                                                           <---------At4g35610 --------->AtSPL8           --------->ZAT18 --------->At4g35610          <---------HSFB2a(2)        < ----------AtSPL8<---------ZAT6         --------->YAB1  <-----------HVH21--------->HSFB2a(2)   <-----   gtactttttcacataaacagtgttaagaagtctactaaacaataagagcagagagatgtgtcaaaagtataccttctcgagagccaattcagcagcagat  11197400                                                    <---------At4g35610                                                    --------->At4g35610                                                    <---------ZAT2                                                    --------->ZAT2                                                  <--------P                                                 <---------MYB52(1)            -------->ATHB1                                               <---------HSFB2a(2)             --------->ATHB12         <----------DOF2                       --------->HSFB2a(2)             <---------ICU4     <---------ARR14(2)                     --------->GLK1(2)                  --------->YAB1     --------->ARR14(2) --------->ARR11(3)<---------HSFB2a(1)                  <------------ATHB5 >RAV1(1)------>ZmHOX2a(1)            ------->GAMYB--------->MYB111(1)        --------->ICU4 ---------LBD16         <---------ARR11(3)--------->HSFB2a(1)                 <---------ATHB12 ----GLK1(2) <-----------GT1       ----------->RAV1(1)                      --------->WOX13(1)  -----   tgttcggaatccttttttctcttgaagacatttgatacaacagaaaattctggtagctgcaagtggcaacgatagaggcaatcattcgaagaaacatgaa  11197500                             ------>MYB83                                       ------>NtERF2                             ------>MYB46(1)                                    --------->LBD16                           <---------MYB46(2)                                  --------->ANAC58                           --------->AtMYB61                                   --------->ANAC58                           <---------MYB111(2)                                 ------->GAMYB                          --------->ANAC58                                     --------->ANAC46                          --------->ANAC58                                     --------->RAP2.6(2)                          --------->ANAC46                                    --------->MYB46(3)                  <---------ANAC58                                            <---------MYB55(2)  ------>ZmHOX2a(1)<----------DOF2                                         <---------ALFIN1 --------->TOE2(3)<---------ANAC58                                        ------>ZmHOX2a(1) -->TEIL ----------->GT1--------->ZAT6            <----------DOF2 <---------At4g35610   cttcctcaattctgtaaattgctttaacaccaaacttctgaagtatcatctcctttggagtaagagtctgcttctcctcacccgccattacaaactcact  11197600                                                                                                    <                                                                                                    -                                                                                                  <--                                                                                              -------                                                                                              -------                                                                                              -------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                 <---------YAB1           <----------                                                              <------ZmHOX2a(2)      <---------ZAT18<                                                             --------->ARR11(3) --------->ZAT14  <---          <---------REM1(2)                                  <---------ARR11(3) <---------ZAT14<-----          <---------ZAT14                         <---------GLK1(2)---------->DOF2   --------->ZAT14-          --------->ZAT14             <---------YAB1        --------->YAB1--------->At5g28300--------     <----------DOF2     ---------->DOF2  <-------TEIL   ---------->DOF2 ----------->GT1 <-----------   gaggcttctttctacactgagacaaacaaaagaactatctatgattcatatagatacttcaaagatcatgaaagatggtaacttcagtgcaaactgtacg  11197700     --------->ANAC46 ---------At4g35610 -------->ZAT2 -------DEAR3(1) -->SPL1(2) -->SPL7 -->RAP2.6(3) -SPL7 >ZAT14<---------ZAT14 -ZAT14--------->ZAT14 -----AtSPL3 --------->ARR14(2) ---------ZAT2 ------At4g35610 ----RAP2.6(2)                                            <---------MYB59 =========================== -------->At4g35610                         --------->CCA1(2)             <-----------RAV1(2)      <- ->SPL1(1)--------->ANAC46  <---------TOE2(3)<-------TEIL <-----------------AGL3           ---------- -------SPL14<---------ARR14(2)      ---------->DOF2      --------->TOE2(3)<---------TOE1(3)       --   gctgctcactgcacagaaccccaaaaaactagggtttttgaaagagatacaagatgatgacctaaattcggagacttcaggttttaagacagacaacagt  11197800                                       <---------LBD16                                      <---------ANAC58                                            ---                         --------->ANAC46           ----------->GT1                    <------ZmHOX2a(1) ==RAV                   --------->ANAC58         --------->At4g35610                --------->ANAC46 --------At4g35610       --------->ANAC58--------->LBD16          <---------TOE2(3)<---------TOE1(1) ->RAV1(1) <------ZmHOX2a(1)--------->MYB52(1)    <---------At4g35610              <---------ANAC46 ------->At4g35610     ---------->DOF2<---------ANAC58         <--------P   <-----------GT1      <---   aagatgaaacagaggaacatgagtcaaaagcaacgatttttcgcgcgaatgaagcagaaaaacaggtagaggttgaagtaacattacgaggaacgaattg  11197900                                                                                                  <--                                                                                                 <---                                                                                           <---------                                                                                        ------->TEIL                                                                                     <---------ANAC55(2)                                                                                     <---------ANAC58                                                  <---------MYB52(2)                 --------->ANAC55(2)                <---------ANAC58                 --------->ANAC58                    <---------ANAC58                <---------ANAC58                 --------->ANAC58                   --------------->AtSPL3           --------->YAB1                        --------->ANAC46                   --------------->AtSPL8          --------->ICU4                         --------->ANAC55(2)            ---------->DOF2<----- ------>YAB1    <---------ANAC46     ---------->DOF2                          <------ZmHOX2a(2)<----- ------YAB1-------->HAHB4 <---------------------WRI1--------->MYB52(1)      <------ZmHOX2a(1)  <-----   tcataaacagaaatgatggtgtgatgaagtcgaatttcagaaagaacccataagtaacgaagcgaaacacaagaagaaggatcaaagacgtacctttgag  11198000                                                                                    <------MYB46(1)                                                                  <---------At4g35610  <---------ANAC46                                                --------->At4g35610<-------GAMYB -------ZAT14                                                   --------->ZAT14     <------MYB83  <-- ------ZAT6                                                     <---------ZAT14     <---------MYB46(3) -DOF2    --------------->AGL15      --------->DAG2            --------->ALFIN1     --------->MYB55(2) ----ANAC46                    ----------->GT1                 <---------ANAC46    --------->ALFIN1 ----ANAC58            ------->GAMYB---------->DOF2    <---------REM1(1) ---------->DOF2     <------- ----ANAC58         ----------->RAV1(1)         --------->GLK1(1)--------->ALFIN1  <---------AtMYB61   tgttgagggaaactagtttgagcaacagagagaatgaaaaaagttgggagatttcaaatgtagcggtgtgctgaagaaagcgagggtggttgtagtcatt  11198100  Previous    Next  AGI:  At4g20920.1    Description:  double-stranded RNA-binding domain (DsRBD)-containing protein. similar to HEN1 (HUA ENHANCER 1) [Arabidopsis thaliana] (TAIR:AT4G20910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42550.1); contains InterPro domain RNA-binding protein Lupus La (InterPro:IPR006630); contains InterPro domain Double-stranded RNA binding; (InterPro:IPR001159) Range:  from: 11193608    to: 11197588    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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