Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->TOE2(3)                          --------->MYB46(3)                          <---------ATHB12                         --------->ANAC58            ---------->DOF2             --------->TOE1(3)                            --------->AHL20(2)          <---------MYB59--------->ANAC58                                     ------->TEIL          --------->TOE2(3)           --------->GLK1(2)                    <---------YAB1         ---    <---------ICU4      --------->WOX13(1)               <----------ID1--------->At4g35610       <--- ----GT1 <---------ANAC55(2)--------->MYB52(1)        ---------->DOF2  <---------At4g35610 --------->TOE2(3)   ttctcagcattacctaaagacagagccaatcaacgaagagaaccttgacaatgtattaaagaacaaaactttcagctatgaatcaaattaaaacatcaaa  11176500          --------->ANAC46          ===================bZIP_DOF          ===================bZIP_DOF                                                            ----          --------->O2                                                                         <-----          <---------TGA1a                                                   --------->LBD16    <-----          --------->TGA1a                    ----------->RAV1(1)           <---------HSFB2a(2) ------          <---------O2                   --------->ANAC58            --------->AHL20(2)       -------       --------->TOE1(2)                 --------->ANAC58      --------->ANAC58            ---------- ------>YAB1                           ---------->DOF2         --------->ANAC46  <---------DAG2------ ------ATHB12     ---------->DOF2 ----------->GT1              --------->ANAC58  <----------DOF2<----   tcatcaaatcccacgagagaaaaagaaacttagacgaagaaaaaagccaacattcttcgaaattcacgaaaaaaaatcccgaactttttgcagaaaagat  11176600                                                                                             <-------                                                                                        <------ZmHOX2a(1)                                                                                      <---------TOE2(3)                                                                                   ==================                                                                                   ------>ZmHOX2a(2)                                                                                  --------->CCA1(2)                                                                                  <------ZmHOX2a(2)                                                                                  ===================     <---------LBD16                                                              =============HOX2a_HOX2a -->ZmHOX2a(2)                                                                   <---------ARR11(3) ----ARR11(3)                                                                    --------->ARR11(3) ----AGP1                                                                        --------->ARR14(2) --->AGP1                                      <---------GLK1(1)                 <---------ARR14(2) -->RVE1(1)         --------->YAB1--------->GLK1(2)                              --------->AGP1 >DOF2<---------LBD16             <---------ARR14(2)                             <---------AGP1 <---- --->ARR11(3)   --------->ICU4    --------->ARR14(2)                            <---------GLK1(1)  -- --ZmHOX2a(2)  --------->ARR11(3)<---------GLK1(2)       --------->GLK1(2)      --------->GLK1(1)  --   ctataaatcggggaagagataatgagaaaaacatagaatctgagagaagaaatcggaagaatttgaagagaatgagactcagagatctgaggattatttt  11176700      <------ZmHOX2a(1) --YAB1----------->GT1 ============HOX2a_HOX2a ============HOX2a_HOX2a -------GT1          --------->ANAC58           <---------SPL7                        ----------->RAV1(1) ------->TOE1(3)     --------->ANAC46          <---------ANAC58                      <----------ID1 ------->TOE2(3)     --------->ANAC58          <---------ANAC58                 ----------->GT1   accttagaggagagaaaacaaacaagcctctctctctctctctctctgggcgtaagagactcgcttactctctccaattgaagggaaacaacaaatacag  11176800                                                                        -------->P                                                                        ------>MYB46(1)                                                                       ------>ZmHOX2a(1)                                                                      <---------MYB59                                                                 ------->MYC3                                                                 <-------MYC3                                                                ======================bZIP_DOF                                                                =================MYC_MYB                                                                <---------O2                                                                <---------TGA1a                                                                --------->TGA1a                                                           --------->PCF2  <----------DOF2                                                           ------>NtERF2------>MYB83                                                    <---------------AtSPL3<---------DAG2                    --------->ALFIN1        ------>ZmHOX2a(1)   --------->O2              ---------->DOF2 <---------ANAC58  --------->YAB1 <---------TOE1(2)    <-----------HVH21         <---------ANAC58 <---------YAB1 <---------ALFIN1              *TSS   acactctgtcacagaagaaagggtgggattttgcttcgcttgaatccttctgataatgttcggcccacgtttcctacctttttttttttgttctgtttta  11176900                                                               <---------YAB1                                                          <-----------GT1                                                     <---------AHL20(2)         <---------AHL20(2)     <---------AHL20(2)   <---------AHL20(1)         <---------YAB1       <----------DOF2     <---------ARR11(3)      --------->AHL20(2)   <---------ARR11(1)     --------->AHL20(1)      --------->AHL20(1)   --------->ARR11(3)     --------->AHL20(2)                         --------      <---------AHL20(2)   <---------ARR11(3)     <---------AHL20(1)       --------------->AGL15      <---------AHL20(1)  <---------CCA1(2)  ------------>CBF==============================MADS_MADS   <---------AHL20(2) <-----------HVH21     <-----------GT1  <---------------AGL15    <-----------TBP   --------->AHL20(2)----------->GT1  ----------->GT1--------->AHL20(2)    <---------------AGL15   --   gccattaaaatattatttgtataaggtcatatcttttattttgtataaacaatattttatttgctatttttgcaaaactaaaaatagtttttgtagagaa  11177000                                    <---------AHL20(1)                                    <---------AHL20(2)                                    --------->AHL20(2)                                 <---------AHL20(1)                                 --------->AHL20(1)                                 --------->AHL20(2)                         <---------AHL20(2)                         --------->AHL20(2)          <---------ARR11(3)     <---------AHL20(2)          --------->ARR11(3)  --------->AHL20(2)                   <---------AHL20(2)          <---------ARR11(1)  --------->YAB1                       --------->AHL20(2)   <---------ARR11(3)   --------->AHL20(2)            --------->DAG2   --------->ARR11(3)   --------->YAB1               ---------->DOF2<---------YAB1  --------->RVE1(1)   <XXXXXXXXXXXXXXXXXXXXMIR406 --------->HSFB2a(2)                       --------- --->GT1 <---------CCA1(2) --------->YAB1<-----------GT1          --------->AHL20(2)  --------->YAB1 ------->YAB1<----------DOF2--------->AHL20(2)    <---------HSFB2a(2)         <-----------GT1   -----   ataaaaatctcatatctttttctgaattaaaataatattttatttactatttctaaaaagttgcaaaattaaaatagttttttctaaatgagaataaaaa  11177100                                                                                       --------->AHL20(2)                                     --------->bZIP60(2)                               <---------AHL20(2)                                     --------->ANAC55(1)                            ----------->GT1                                     --------->ANAC58                              ----------->GT1                                     --------->ANAC46                             --------->ARR11(3)                                   <---------ALFIN1                          <---------AHL20(2)                              <---------ZAT6 ------->TEIL   <---------AHL20(2)    <---------ARR11(3)                           --------->HSFB2a(2)              --------->AHL20(2)---------->DOF2 >AHL20(2)                 <---------HSFB2a(2)     <---------ETT(2)      --------------->AGL15 ---->AHL20(2)    <-----------RAV1(1)--------->ANAC58     --------->YAB1 <---------------AGL15   aaatagtattttctaaatttgtgttgtttctagagtaacacgccatgtatatgtagacaaatataaattgttttgctattaaaagatgtttaaattttgg  11177200                                                                         --------->ATHB12                                                                    <----------DOF2                                                                    <---------DAG2                                                                ------>ZmHOX2a(2)                                                               --------->CCA1(2)                                                               --------->ARR14(1)                                                               <------ZmHOX2a(2)                                                              --------->ARR14(2)                               ---------->DOF2                --------->ARR11(3)                  <-----------GT1          --------->At4g35610<---------ARR14(2)              <---------AHL20(2)           <---------At4g35610--------->AGP1              --------->AHL20(2)        <-----------GT1      <---------HSFB2a(2)              <---------GLK1(2)     ----------->GT1     <---------ICU4          --------->HSFB2a(2)            ----------->ARR10      ----------->GT1   aaaacaaaaattacattttttttctaattttctaaaagcctcttcagcataaatcacagacacagatccgctttttgatttggaaatggaaaataaaaac  11177300                                     <------MYB83                                     <------MYB46(1)                                     <---------DEAR3(2)                                    <---------MYB46(3)                                    --------->MYB59                                 <------MYB83                                 <---------MYB46(3)                                 <------MYB46(1)                                <---------MYB46(3)                                --------->MYB111(1)                                <---------AtMYB61                                --------->MYB55(2)                                --------->MYB111(2)                        <-----------RAV1(2)                     --------->YAB1 <---------DEAR3(1)               =====================RAV <-------TEIL               ----------->RAV1(1) <---------ORA47(1)           --------->ANAC58    <--------P           --------->ANAC58   <-------GAMYB                             <-----------HVH21         <---------ANAC58    --------->ATHB12--------->YAB1            <----------DOF2 <-----------GT1         <---------ANAC58    <---------MYB46(3)                    ---------->ID1 ----------->GT1   aagaatgtatggctagccaacattgatcagatggttggtcggtccattgataatatgaagttatctcttgtcactttcagagaatggtttttctcttctc  11177400  Previous    Next  AGI:  At4g20870.1    Description:  fatty acid hydroxylase, putative. similar to FAH1 (FATTY ACID HYDROXYLASE 1), catalytic [Arabidopsis thaliana] (TAIR:AT2G34770.1); similar to unknown [Populus trichocarpa] (GB:ABK93387.1); contains InterPro domain Fatty acid hydroxylase (InterPro:IPR006694) Range:  from: 11174461    to: 11176892    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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