Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->YAB1                                --------->ARR11(3)                              --------->HSFC1(2)                <---------AHL20(1)       <--------HAHB4                --------->AHL20(2)      <---------YAB1                --------->AHL20(1)    --------------->AGL15                           <---------ICU4                <---------AHL20(2)    <---------------AGL15                           --------->AHL20(2)               --------->AHL20(2)    <-----------------AGL3                   <---------ANAC46             ------->TEIL     <---------HSFC1(2)                          --------->ICU4          ---          <---------YAB1   --------->LBD16                     <---------STY1(2)      --------->YAB1      <----------DOF2     --------->HSFB2a(2)                  --------->At4g35610 --------->YAB1 ---     --------->YAB1       --------->ANAC46 <---------YAB1 <---------YAB1  <---------YAB1 <-----------GT1   acatctatctttatgaattttattttttccgaaacatctactattattagtagttctaatatgttagctagaagtcatttttgtgtaataatatccatct  11172200                                 <---------TOE2(3)                        ---------->DOF2                           --------->At5g28300                       <---------MYB52(1)                        <---------------AGL15             --                      --------->TOE2(3)                          --------------->AGL15             <-                      --------->TOE1(3)                         <-----------------AGL3         <-----                    ------>MYB83---------->DOF2         ----------->GT1                        ------                    ------>MYB46(1)              <---------------AGL15                        <------                   --------->MYB52(1)            --------------->AGL15     <---------GLK1(1)  -------                  --------->TOE2(2)             <---------ANAC55(2)  ---------->DOF2--------->AHL20(2)                 --------->MYB46(3)             =================================MADS_MADS<---------YAB1 ------>REM1(1)  <---------MYB55(2)             <-----------------AGL3     --------->GLK1(1) <------- ------>ANAC46   <---------MYB52(2)         --------->YAB1 --------->CCA1(2)      <----------DOF2 <--   acaccatgactcttgacaaaccaacgttaagctctaaagttgacaaaaatacttaaaatggatataactgtaaaaggaaatgccctttaattctgattta  11172300                                                                                         <-----------GT1                                                                                         --------->ARR11(3)                                                                                     <--------ATHB1                                                                                     -------->HAHB4                                                                                     <--------HAHB4                                                                                     <---------ICU4                                                                                     --------->YAB1                                                                                     --------->ATHB51           --------->AHL20(2)                                                       <---------ATHB51          <---------AHL20(2)                                                        <---------YAB1          --------->ICU4                                                            --------->ICU4 <---------YAB1                                                ---------->DOF2    --------->YAB1 ------->AHL20(2)                                          <----------ID1      --------->ANAC55(2) --------AHL20(2)        <---------DAG2                -------->HAHB4          --------->ANAC58 ----AHL20(2)            <----------DOF2               --------->YAB1          <---------ANAC55(2) --->AHL20(2)           <---------ANAC58               <---------ICU4          ----------->GT1 ---AHL20(2)            <---------ANAC58              <---------ATHB12         --------->ANAC58  <--- -->AHL20(2) <---------YAB1                           <---------ATHB51  --------------->AGL15    ---- --WOX13(1)<---------AHL20(2)                         --------->ICU4    <---------------AGL15 <------ -------AHL20(2)  <-----------RAV1(1)          --------->REM1(1)    --------->ARR14(2)  <---------ICU4   tttatttttgaaattattttttgttggctttttgtaacaatggaagtctacatctaataatgagccaaagtattctccatcaagtaataattatctccac  11172400                                                                                        -------->P                                                                                        --------->MYB52(1)                                                                                     <---------At4g35610                                                                                     --------->ZAT2                                                                                     --------->HSFB2a(1)                                                                                     --------->At4g35610                                                                         <----------DOF2<---------At5g28300                             <---------ARR14(2)            --------->ANAC46          --------->HSFC1(2) ----MYC3                 <---------ANAC46 <---------YAB1  --------->ANAC58       --------->LBD16 --->MYC3                <-----------------------TaNAC69(2)--------->ANAC58 ----------->HVH21 <------ ---ALFIN1   --------->ICU4  --------->ARR14(2)    --------->ANAC46  <---------ZAT18 <---------HSFC1(2)   gtttgaaaaattgcaatatttgttaaacgcgtatacatggtgatcaccattccacatcaactcgcaaatagtctacttttgacccgaagctaccgtcttt  11172500                                      <---------ICU4                                  <---------YAB1                                --------->YAB1                               <-------TEIL<---------ANAC46                           <---------AHL20(1)              --------->ICU4                           --------->AHL20(1)              <---------YAB1                           <---------AHL20(2)          --------->ARR11(3)                          --------->AHL20(2)       <---------AHL20(2)                     --------->TOE2(3)--------->YAB1   <---------ARR11(3)          ----------->GT1                     --------->YAB1--------->YAB1 --------->AHL20(2)       ------->GAMYB <---------ARR11(3)   <---------At4g35610    --------->YAB1   <---------bZIP60(2)        <---------MYB52(2) --------->GLK1(2) ----DOF2--------->ANAC46<---------YAB1 ----------->TGA1 --------->YAB1 <-----------GT1  --------->ARR11(3)   gttttagctactcgtcaaaataatcttattatattcataatagtgacgttgatttaatatcatgatcaaacaaataaccccaaaaatgaaaaatctatat  11172600                                              --------->ARR14(2)                                              --------->GLK1(2)                                              ------->TEIL                                              <-----------ARR10                                              <---------ARR11(1)     <------ZmHOX2a(2)                                   <---------GLK1(2)       --------->ANAC58 --------->ZAT6                                 *TSS         <---------ARR14(2)    --------->ARR11(3)    ------>ZmHOX2a(1)          <---------ATHB12            --------->ANAC58--------->ZAT18    --------->LBD16          --------->WOX13(1)--------->HSFB2a(1) <------ZmHOX2a(1)  ----------->RAV1(2)      ------------>CBF  <---------ARR14(1)---------->DOF2          <----------DOF2   agcctcctgaactcttcttctctctgaaactcaatcagtttctcaacgaatctttctaaacaagacaaaggatcaagaacactacttgttctttgtctga  11172700                                  <---------YAB1                                --------->CCA1(2)                               --------->ARR11(3)                   >>>>>>>>>>>>>AGL25                --------------->AGL15                <---------------AGL15               <-----------------AGL3               ----------------->AGL3               ----------------->AGL2               ------->TEIL                      --------->ARR14(2)          --------->ANAC58     --------->ARR11(1)  <---------CCA1(2)                  --------->GLK1(2)          --------->ANAC58     <---------ARR11(3)--------->ANAC55(2)                  <---------ARR14(2)          --------->ANAC46 ---------->DOF2 <----------DOF2      <----------DOF2  <-----------HVH21   gacttcaaacacaagaaaccaaaaatagaaaaagatatgagagagctttttatgtatctatttcttcttttcttagttctatgtgtcaaatctgtttatt  11172800                                                                                              <------                                    --------->ANAC46                                         --------                                 <---------ZAT18                                       --------->ZAT6                                 --------->ZAT18                                   --------->YAB1                            <---------ANAC46                                      <---------ATHB12 --                            <---------ANAC58                                   <---------ALFIN1   ---    ------>NtERF2           <---------ANAC58                                  --------->MYB46(3)  ---   <---------ETT(1)    <---------ICU4                   --------->ANAC46    <-----------GT1  <-------   ctactccgacaagagaacaattccaaaattgcttgtccacaaaacaattcaattctaccctcaaaaaccctataaatctcaccactcatacactagattc  11172900         --------->DEAR3(1)         --------->DREB2C(2)        --------->DEAR3(2)   --------->ZAT14   <---------ZAT18                                                                       --------->ANAC58   --------->ZAT18                                                                       --------->ANAC58   <---------ZAT14                                                                    <---------MYB52(1) ---GLK1(1)  <----------DOF2                                                          xxxxxxxxxxxxxxx ->ARR14(2)------>MYB46(1)                                                  --------->ARR14(2) ------->LBD16     --------->LBD16            --------->TOE2(3)             <---------GLK1(2)   ----- ------------------>WRI1            --------->GLK1(2)           --------->ANAC58     --------->TOE2(3) ------>LBD16<---------DAG2 <---------At4g35610             <-----------GT1 <---------ARR14(2)  ----- --GLK1(2) ------>MYB83     --------->At4g35610------>ZmHOX2a(1)--------->ANAC58<---------YAB1  <----   ccgagttcacaccgacttttccgagtcttcatctccaaattctagtttcctcaacttgaatttcacaagcttgaagccgattctcatcgttaagccaaaa  11173000                                            <---------ANAC58                                            <---------ANAC46                                   <------ZmHOX2a(1)           --------->AHL20(2)     --------->ANAC58      --------->LBD16             --------->ANAC58                        --------->ICU4  --------->GLK1(2)             <-----------RAV1(2)                       <---------YAB1  --------->ARR14(2)           <---------ZAT2                        <---------MYB46(3)  <---------ARR14(2)           <---------At4g35610               --------->ALFIN1 xx>smallRNA(le3)              --------->ZAT2                    <---------AtMYB61           <------- ---->GLK1(2)                  --------->At4g35610--------->ANAC58  <---------AtMYB61   <---------CCA1(2) ---->ARR14(2)                ----------->RAV1(1) --------->ANAC58<---------MYB46(3) --------->ARR11(3) -----ARR14(2)          <---------AHL20(2)  <---------ANAC58  --------->ATHB12       <---------ARR11(3)   tccgaatccgaaataaaacaatcgattttatgcagcaggaaacttggagtgcaagtaagaacaatgagtggtggtcatgactacgaaggtctatcttacc  11173100  Previous    Next  AGI:  At4g20860.1    Description:  FAD-binding domain-containing protein. similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42587.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Oxygen oxidoreductase covalent FAD-binding site; (InterPro:IPR006093); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) Range:  from: 11172633    to: 11174478    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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