Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    ----------->HVH21              <---------ANAC58              <---------ANAC58            <---------YAB1       --------->bZIP60(1)       <---------bZIP60(1)       <---------ANAC46       <---------ANAC55(2)                                                         <---------At4g35610       --------->ANAC55(2)                                                         --------->At4g35610       <---------ANAC58                                                          <-----------RAV1(2)       <---------ANAC58                                                          ====================       --------->O2                                                         <------MYB83       <---------O2  ----------->RAV1(2)                                    <------MYB46(1)       <---------TGA1a            <---------ANAC46                  --------->ANAC58       --------->TGA1a  --------->ZAT2                 <---------ICU4<---------MYB59      ----------->STF1  --------->At4g35610           --------->ICU4--------->ANAC58    --------->WRKY12 <---------ANAC58                <---------TOE2(3)     --------->MYB59    ----------->HVH21<---------At4g35610           --------->ICU4   ----------------->AGL1         == <---------MYB46(3)  <---------ANAC58         ----------->GT1       <-----------------AGL1         <-   cagtagttgacgtgattcttgtgacctgctgcaattttgtgtaatgaaatgtgataatgttgacatttggacccaatttggtcgcagatgagaagggaat  11157500             <------NtERF2            --------->LBD16           <---------ANAC46                           <---------MYB46(3)                           <-           <---------LBD16                            --------->MYB52(2)                           <-          <---------LBD16                         <------NtERF2                                   <--         <---------ZAT2                          ------>NtERF2                                    <--         --------->ZAT2                         <---------ALFIN1                            <--------    <---------ANAC58         <---------MYB46(3) --------->DEAR3(1)                          <--------    ----------->RAV1(2)  <---------DEAR3(1)    --------->MYB46(3)                       --------->YAB1    ----------------->AGL1  --------->ALFIN1   --------->ATERF1(1)                    --------->GLK1(2)    <---------ANAC46   --------->MYB52(1)     <---------ATERF1(1)                    <---------GLK1(2)    <---------ANAC58  <---------SPL7        <------ZmHOX2a(1) <---------DEAR3(1)  <---------HSFC1(1) ==========RAV ---------->DOF2<-----------HVH21<---------ABI4(2) <---------AtMYB61--------->HSFB2a(2) ===============RAV   ----------->HVH21--------->ALFIN1    ----------->HVH21      <---------HSFB2a(2) ----------RAV1(1)   <-----------RAV1(2)    --------->ATERF1(1)  --------->ALFIN1 --------->HSFC1(1)   gttgttgcctgagccgggaaaggccagacggtggtcacgagttggaggagccaccgtagttgcgacggtggtcttacatgtcttctagaatcttaagatt  11157600                                     --------->ARR11(3)                                     <---------ARR11(3)                         ------------>CBF                                    <---------GLK1(1)                        <----------DOF2                                   <---------ARR11(3)                       ------>ZmHOX2a(2)                            <---------ANAC46                              --------->ARR11(3) ---------DOF2              <---------ANAC58                              --------->AGP1 --------DAG2               <---------ANAC58                              <---------ARR11(3) -------ANAC58         --------->ATHB12                                   <---------AGP1 -------ANAC58         <---------MYB46(3)                                <---------CCA1(2)    <------ -YAB1              <---------AtLEC2--------->GLK1(1)               <----------DOF2           <------ -TOE2(3)         <---------YAB1 <---------YAB1           <---------GLK1(2)<------ZmHOX2a(2)  <------   gctttttgtattgttttgttttgaatggttgagtgatgatatctcttcataagatgaacagagtctcactcttttagatctttccaatctgaagttgcga  11157700                                                                    <----------DOF2                                                              <-------GAMYB                <---------ARR14(2)                         <------MYB83   --------->AHL20(1)                <---------GLK1(2)                          <------MYB46(1)<---------AHL20(1) --------       <---------TOE2(3)                                   <---------ANAC58                 ---------     ---------->DOF2                                       <---------ANAC58             ---------->DOF2  <-----------TBP--------->CCA1(2)                        --------->MYB55(2)       ----------->GT1 ---ANAC58      --------->ARR14(2)           <------------CBF--------->ALFIN1  <---------AHL20(2) ---ANAC58   --------->HSFB2a(2)          <---------ATHB12<---------MYB46(3)  --------->AHL20(2) ---ANAC46 <-------TEIL               ------------>CBF   --------->ALFIN1 --------->AHL20(2)<--------   gagtttttaaaggttcgagatttgcattagaaacagagcatacaatgaattgttagtcagtgggtgttggctttgatatattatatagcaaaaagatata  11157800                   <---------ICU4                   --------->YAB1                                                     <-------TEIL                   --------->ATHB12       --------->YAB1                         ---------->DOF2                   -------->HAHB4       --------->AHL20(2)                  <-------GAMYB                  --------->ICU4       --------->YAB1                      <---------MYB46(3)    <------------CBF                  --------->AHL20(2)                   ----------->GT1   --------->CCA1(2)                --------->YAB1 --------->ARR11(3)     <---------ANAC46  --------->ARR11(3)              --------->AHL20(2)   <---------CCA1(2)  <---------AtMYB61  <---------ARR11(3)     <---------HSFB2a(2)       <-----------ARR10    <---------MYB46(3) --------->ZAT14 ->CCA1(2)        <---------YAB1 --------->YAB1    <---------ARR11(3)  <---------AtMYB61   <---------ZAT14 >ARR11(3) ----------->GT1      --------->AHL20(2)<---------CCA1(2)--------->ZAT14<---------------AtSPL8 -ARR11(3)----------->GT1--------->HSFB2a(2)--------->AHL20(2)     <---------ZAT14--------->DAG2   tagagatattgggagttaaaatgattactagaaaataaaaataaaaataaacatatcttatcttctctgtttagtggtggttataaagtacagaacagag  11157900                                                                            --------->ARR14(2)         <-----------ARR10                                                  ------->TEIL         --------->GLK1(2)                                                  <---------ARR14(2)         ------->TEIL                                                       <-----------ARR10        <---------GLK1(2)      ----------->RAV1(1)                       --------->TOE1(1)        <---------ARR14(1) <---------WOX13(1)                            --------->TOE2(1)      <---------MYB52(2)  <------------CBF                     ---------->ID1<---------CCA1(2)     --      --------->MYB46(3) <---------ICU4              <----------DOF2    ------>ZmHOX2a(1)         ---    --------->MYB52(1)   --------->ATHB12           <------------------------ANAC81               --- --------->ANAC46       <---------YAB1       ---------->ID1--------------------->WRI1<----------DOF2 --------->ANAC58       --------->ICU4      <------------------------ANAC81 <---------ARR11(1)   ---- --------->ANAC58     --------->YAB1    --------->TOE2(3)  <----------DOF2 <---------CCA1(2)    <----   aagaagcaacgaatctcattacaacgatgattgcaacacaaacctttgtctctgtctttttctttgtcttcttcctcgtatctctccctttcttctcatc  11158000     --------->DEAR3(1)                                        <---------ARR11(3)     <---------ALFIN1                                          --------->ARR11(3)  <---------ALFIN1                                             <-----------ARR10 <---------ZAT2                                               <---------GLK1(2)     <---------ETT(1) <---------At4g35610                                    --------->ANAC58            --------->At1g77200 ------->ANAC46                                         --------->ANAC58            --------->DREB2C(2) ------>LBD16                                       ------>NtERF2                   --------->DEAR4(1) ------>At4g35610          --------->ANAC46        <---------ETT(1)                 --------->DEAR3(1) ----->ANAC46  <---------YAB1  <---------ATHB12    ----------->HVH21    --------->ANAC58 -----LBD16  <---------At4g35610--------->ATHB12   --------->ANAC46     --------->ANAC58   <---------ARR11(3)   cgcagcacctccgtcttctgattctatctacgaatcattcgttcaatgtttctccgacaagacaaaatctccacaagcccaaatcaccgacaatgtcttc  11158100                                                           --------->ZAT6                                  <---------ANAC58         <---------ALFIN1      --------->ZAT2   ---                                  <---------ANAC58     <-------TEIL              --------->At4g35610                              <---------ANAC58      <------MYB83       ------>NtERF2 <---------YAB1                            ------>ZmHOX2a(1)       <------MYB46(1)   --------->ANAC46    <----------                     ------>ZmHOX2a(1)             <---------TOE1(2)  --------->ANAC58    <----------              <----------DOF2 <---------ANAC58    <-----------RAV1(2) --------->ANAC58--------->YAB1   tctcggacaaacccttctttctcctccgtccttcgtgcttacattcgaaatggcaggttcaacacttcatctacgccaaaaccagctatcatcgtcactc  11158200                           <---------MYB52(1)                           <------NtERF2                          <-----------HVH21                         --------->ANAC46                         --------->O2                         --------->bZIP60(1)                         --------->ATERF1(2)                         <---------ATERF1(2)                         --------->RAP2.3(3)                         --------->RRTF1(2)                         --------->RRTF1(3)                         --------->RAP2.6(2)                        <------NtERF2                        --------->ERF1                        --------->RAP2.3(1)                       <---------ATERF1(1)                       ------>NtERF2                       --------->ABI4(1)                      --------->RRTF1(2)                      <---------DEAR3(1)                      --------->RAP2.3(3)                      --------->DEAR3(1)                      --------->RAP2.3(2)                      --------->RRTF1(3)                     --------->ORA47(2)                     --------->RAP2.6(1)                     --------->RAP2.3(1)                     <------NtERF2                     --------->ATERF1(1)                     --------->RRTF1(1)                     --------->ERF1                     --------->DEAR4(2)                    <---------RAP2.3(1)                    ------>NtERF2                    <---------ATERF1(1)                   --------->ANAC46                   --------->DEAR3(1)                  <------NtERF2                  --------->ATERF1(1)                  <---------At4g35610                  --------->At4g35610                 <---------ATERF1(1)                ---------->CDC5                <---------WRKY12              <-----------TGA1              <-----------HVH21             ==============MYC_MYB             <---------O2--------->DEAR3(1)             --------->O2--------->RAP2.3(2)             --------->TGA1a             <---------TGA1a             =====================================bZIP_DOF                      --------->YAB1             --------->bZIP60(2)                                               <---------YAB1             --------->ANAC58                                              <------NtERF2             --------->ANAC58                                            <---------RAP2.6(2)             --------->ANAC46            ----------->GT1               <---------MYB46(3)        <---------ARR14(2)------>NtERF2 --------->DAG2        --------->ARR14(2)<---------ICU4        --------->ARR14(2)<---------RAP2.6(3)     <-----------GT1     <---------AtMYB61   --------->ARR11(3) --->ZmHOX2a(1)--------->TGA2(2)       ---------->DOF2        <---------ARR14(2)--------->ATHB12 -TGA1 --------->GLK1(1)--------->ATERF1(1)  --------->AHL20(2)       --------->ALFIN1    <---------ARR11(3) -HVH21<---------GLK1(1)--------->RRTF1(1)----------->GT1     --------->GLK1(2)--------->ICU4       -   ctcgctccgatatccacgtcagcgccgccgtcacttgctcaaaaagtttaaatttccttctcaaaatccgaagtggtggccatgattacgaaggtctctc  11158300                                                                                        ------>NtERF2                                                                                       --------->ANAC46                                                                                   <---------GLK1(1)                                                                                   --------->GLK1(1)                                                --------->bZIP60(1)               --------->ARR14(2)                                                <---------bZIP60(1)               <---------ARR11(3)                                             <---------MYB52(1)                   --------->ARR11(3)                                            --------->LBD16                       <---------AGP1                                       <---------GLK1(1)                          <-----------ARR10                                       --------->HSFB2a(1)                        <---------ARR14(2)                                       --------->GLK1(1)                    --------->At4g35610                                       <---------HSFB2a(1)                  --------->ZAT2  <------NtERF2                                      --------->ARR14(2)                    <---------ZAT2 --------->LBD16                                      <---------ARR14(2)                  --------->YAB1--------->LBD16                                      <---------ARR11(1)                 <---------ATHB12 --------->DEAR3(1)                                      <-----------ARR10                --------->WOX13(1)<---------LBD16                                     <---------CCA1(2) <-------GAMYB <------ZmHOX2a(2) --------->DEAR3(1)           <-----------GT1 --------->ANAC46 <-----------HVH21        <---------ATHB12 <---------LBD16       --------->YAB1    --------->ANAC46 <---------LBD16         --------->DEAR3(1)------>ZmHOX2a(2) -------->REM1(1)      <-----------GT1------->TEIL  --------------------->WRI1   <---------CCA1(2)   ttacatctctgataaaccattttttatactcgacatgtcgaatctccgtgatgtctctgttgatatcgccgatcaatcagcttggatctccgccggagca  11158400  Previous    Next  AGI:  At4g20830.1    Description:  FAD-binding domain-containing protein. Identical to Reticuline oxidase-like protein precursor [Arabidopsis Thaliana] (GB:Q9SVG4;GB:Q3E9Y2;GB:Q8H7B5); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20840.1); similar to electron carrier [Arabidopsis thaliana] (TAIR:AT1G11770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42591.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) Range:  from: 11155464    to: 11157817    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g20840.1    Description:  FAD-binding domain-containing protein. similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20830.1); similar to electron carrier [Arabidopsis thaliana] (TAIR:AT1G11770.1); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20830.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42591.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) Range:  from: 11157927    to: 11159546    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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