Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------AHL20(2)                                                    --------->AHL20(1)                                                    --------->AHL20(2)                                               <---------AHL20(2)                          <---------CCA1(2)    --------->AHL20(1)                  <---------AHL20(2)    --------->YAB1--------->YAB1               <----------DOF2                <---------YAB1       --------->YAB1--------->YAB1          --------->ICU4             <---------YAB1--------->ARR14(2)  <---------AHL20(1)      --------->ZAT14          --------->AHL20(2)       <---------WOX13(1)<---------YAB1    --------->ZAT18    <---------AHL20(2)          <---------AHL20(2)    <---------YAB1 --------->AHL20(2)      <---------ZAT14 --------->YAB1         <---------WOX13(1)<---------ARR14(2) --------->AHL20(2)    <---------ANAC46 --------->AHL20(2)   agattagtctgatttattattaatatgcaaatctctgattaataagaaataaattataatagaaatattgatgtgtactgatcatcttttaataaatgtt  11155100                                                                   <---------ALFIN1                                                                 --------->CCA1(2)                                                                --------->ARR14(2)                                                                <---------ARR14(2)                                                              --------->LBD16                                                             --------->HSFB2a(2)         --------->YAB1                                                             <---------HSFB2a(2)   <---------ANAC55(2)                                                       <---------AHL20(2)          --------->ANAC55(2)                    ------->TEIL                      <---------AHL20(2)     --------->AHL20(2)                 <---------YAB1                       --------->AHL20(2)     <---------AHL20(2)               --------->YAB1------->TEIL      --------->At4g35610<-------TEIL<---------AHL20(2)  <--   tgagactacaaatactataatgaatcaaatgaacataaatgtatagatgaactgaataaaattccagatacaccttgaattaaatatgtattcatagtat  11155200                                             --------->ARR11(3)                                             --------->GLK1(2)                                 ------                                             <-----------ARR10                                 <-----                                             <---------ARR11(3)                        --------->ARR11(3)                                 <---------YAB1          --------->YAB1             --------->AHL20(2)                              <---------YAB1--------->CCA1(1)                  <---------AHL20(2)                              ------>ZmHOX2a(1)       --------------------->WRI1    <---------AHL20(2)            <---------GLK1(1) --------->ICU4--------->RVE1(1)                  --------->AHL20(2)     <---------AHL20(2)      --------->TOE2(3)        <----------DOF2         --------->AHL20(2)    - -------AHL20(2)       --------->AHL20(2) --------->AHL20(2)           --------->YAB1  --------->GLK1(2)   ttttttttaaaatgaaatctggattttaaatccttattattcaaaaaaatcttctcctttgatatttttgctataacaaattaaaataaaatctgtaatc  11155300          --------->TOE1(3)         <---------WRKY18(1)      <---------ARR14(2)           --------->WRKY45      --------->ARR14(2)  <---------AHL20(1)     <---------CCA1(2)    --------->ARR11(3)   <---------ICU4         <---------ARR11(3)     --------->AHL20(1)   --------->YAB1        --------->CCA1(1)       <---------ARR11(3)                   <--------------  <---------ATHB12       --------->RVE1(1)       --------->ARR11(3)                  ---------->DOF2 --->ICU4 --------->TOE2(3)        --------->WRKY12 <---------AHL20(2)   --------->AHL20(2) <-------- ----ATHB12<---------MYB52(1)<----------DOF2     <---------AHL20(1) --------->MYB46(3)--------------- -------->YAB1      <----------DOF2--------->WRKY38(1)         --------->ANAC46  <------------CBF   actaatcatatcccttaactccctttaatatcttttgttgaccaaaacaaatatttttttgttatatgcaacgaataaaaaaacattgaaagtactttcc  11155400                                                                                                    -                                                                                                    =                                                                                                    -                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                     <---------ARR11(3)                                                                                 ---------->DOF2    -                                                                             --------->ANAC58       -                                         <---------ANAC55(2)                 --------->ANAC58       -         --------->ANAC58  --------->At5g28300                           --------->ANAC58           -         --------->O2      <-------GAMYB --------->ANAC58       *TSS     --------->ANAC58           <         <---------O2----------->RAV1(2) --------->ANAC58      ===============================HOX2a_HOX2a         --------->ANAC58 <---------MYB46(3)                   ==============================HOX2a_HOX2a         <---------ANAC55(2)            <---------LBD16        <------ZmHOX2a(1) ==================== -AtSPL8 --------->ANAC55(2)   ----------->TBP      ---------->DOF2 --------->ANAC58 --------->ARR11(3) --DOF2  --------->ANAC46 ----------->GT1<---------------------WRI1 --------->ANAC58 <---------AGP1 < >AtSPL8 --------->ANAC55(1)   <---------YAB1 <---------------AtSPL8--------->ANAC46--------->RVE1(1)   aaaaacaaaacacgtcttcttctccctgcggttataaatagacacggataagtacaaagaacagaggaacacgagacccaagaaaaagatctcaaaatgc  11155500           --------->ANAC58           --------->ANAC46           <---------MYB52(2)           --------->ANAC58      --------->AtMYB61    ------>NtERF2   <---------ALFIN1 -------->TGA1a =========================================bZIP_DOF -------->ANAC46 -------->ANAC58 -------->bZIP60(1)            <----------DOF2 -------->O2   --------->HSFB2a(1) -------->ANAC58--------->TOE2(3)               ------>ZmHOX2a(1) ---------O2  ------->TEIL ---------->ID1 <<<<<<<<<TBF1 =========bZIP_DOF   ---------->ID1    <<<<<<<<<TBF1     <----------DOF2 ---------TGA1a<---------HSFB2a(1)  <<<<<<<<<TBF1  ------>ZmHOX2a(1)        <----------DOF2   tcacgacacctccacgaacctttgtctctgtccctttcttcttcttcttcctcctcttcctttctctacctctctcatctttctctcaatcgaactctgt  11155600                                    <---------ARR11(3)                         ------>NtERF2                        <---------ETT(1)                        --------->ANAC46           ------>ZmHOX2a(1)    --------->ANAC58                <---------ARR11(3)                <--          --------->TOE2(3)     --------->ANAC58     <---------ATHB12                         ------>ZmHOX2a(1)      <----------DOF2   ----------->HVH21--------->ANAC46----------->HVH21             <----------DOF2   atacaactctttcctcaagtgtttctccgacaagacgaaatctccacaatcccaaatcactgacaatgtcttctctcagacaaaccctgctttctcctcc  11155700                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              <------NtERF2                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             ------>NtERF2                                                                                             <-------                                                                                            ---------                                                                                            ---------                                                                                           --------->At4g35610                                                                                           --------->ATERF1(1)                                                                                           <------NtERF2                                                                                           <---------At4g35610                                                                                          <---------ATERF1(1)                                                                                         ---------->CDC5                                                                                         <---------WRKY12                                                                                       <-----------HVH21                                                                                       <-----------TGA1                                                                                      <---------TGA1a                                                                                      <---------O2---                                                                 <---------ICU4       --------->bZIP60(1)                                                                 <-----------GT1      --------->O2---                                                              --------->YAB1          ==============MYC_MYB                  ---------->DOF2                             <---------ICU4          --------->ANAC58               --------->ANAC58                              <---------YAB1           <<<<<<<<<<AtbZIP1               --------->ANAC58                              --------->ICU4           --------->TGA1a               --------->ANAC46                            --------->YAB1             --------->ANAC58              <---------LBD16                             <---------YAB1              <---------bZIP60(1)          ----------->ARR10                            --------->MYB46(3)             --------->ANAC46       <---------ANAC58                               ------>MYB83                    --------->bZIP60(2)       <---------ANAC58                ------>ZmHOX2a(1)--------->AtMYB61           <---------ALFIN1<   <---------ANAC58             <---------ALFIN1      ------>MYB46(1)         --------->HSFB2a(2)<---   <---------ANAC58         <-------TEIL             --------->ANAC46         --------->LBD16<------- -------MYB52(1)--------->LBD16 --------->ZAT6      --------->MYB46(3) ------>ZmHOX2a(1)--------->TGA2(2)   gttcttcgtgcttacatccgcaatgcgaggttcaacacttcctctactcttaaacccaccatcataatcactcctcgctccgagagccacgtcagcgccg  11155800 ------NtERF2 ----------HVH21 --------RAP2.6(3) ---->NtERF2 -------ATERF1(2) ------>RAP2.3(2) ------>O2 ------>ATERF1(2) ------>bZIP60(1) ------>DEAR3(1) ------>RAP2.6(2) ------>RAP2.3(3) ------>ANAC46 ----->RAP2.3(1) ----->ATERF1(1) ----->ERF1 ----->RRTF1(1) ---->ABI4(1) ->NtERF2                                       <------NtERF2 -----ATERF1(1)                                 ------>NtERF2 ----DEAR3(1)                                  ------>NtERF2 --->RAP2.3(2)                                <---------DEAR3(1) --->RRTF1(3)                                 <---------ANAC46 --->RRTF1(2)                                 --------->DEAR3(1) --->RAP2.3(3)                                --------->ATERF1(2) --->DEAR3(1)                                 <---------RAP2.6(2) -->RRTF1(1)                                  <---------ATERF1(2) -->RAP2.6(1)                                --------->DREB2C(1) -->ORA47(2)                                 <---------DREB2C(1) -->ATERF1(1)                                --------->At4g35610 -->DEAR4(2)                                 --------->ATERF1(1) -->ERF1                                     <------NtERF2 -->RAP2.3(1)                               <---------ATERF1(1) --ATERF1(1)                                <---------DEAR4(2) >ANAC46                                   <---------DEAR3(1) >DEAR3(1)                         --------->GLK1(2)--------->ICU4 ------>RRTF1(3)              ------>ZmHOX2a(1)--------->RAP2.6(2) ------>RRTF1(2)           ------>ZmHOX2a(1)<---------RAP2.3(1)                                     - ---------MYB52(1)     <-----------GT1     <---------RAP2.3(2)                                      - ---NtERF2      --------->TOE1(3)  --------->ARR14(2)                          <---------ETT(1)    -- --RAP2.3(1)    --------->TOE2(3)  <---------ARR14(2)                      <---------GLK1(1)<--------   ccgtcacttgctcaaaaaccctaaatttcctcctcaaaatccgaagcggcggccatgactacgatggtctctcttacatttccgacaaaccatttttcat  11155900                     <---------bZIP60(1)                     <---------TGA1a                     <---------ANAC58                     --------->bZIP60(1)                     <---------TGA2(1)                     <---------ANAC55(2)                     <---------ANAC46                     --------->ANAC55(2)                     <---------ANAC58                     --------->TGA2(1)                     --------->TGA1a                     <---------O2                     --------->O2                     <---------bZIP60(2)                    ----------->STF1                   <---------TGA2(2)                  ----------->TGA1                               <------NtERF2                  <---------MYB52(1)                            --------->LBD16                  ----------->HVH21                          ------>NtERF2                 <-----------HVH21                           --------->LBD16                <---------ANAC58                            --------->DEAR3(1)                <---------ANAC58                            --------->ANAC46             --------->ARR14(2)                            <---------LBD16             <---------ARR14(2)                          ------>ZmHOX2a(2)            <---------KAN4(1)                           <---------GLK1(1)            --------->KAN4(1)                           --------->GLK1(1)            <---------HSFB2a(1)                        <---------ARR14(2)            --------->GLK1(1)                          --------->ARR14(2)            --------->HSFB2a(1)                        ------->TEIL            <---------GLK1(1)                          <---------ARR11(3)            <----------TaMYB80                         <-----------ARR10           ---------->TaMYB80               <---------ARR14(2) --------->DEAR3(1)             ------- -------->ANAC46--------->ANAC46 <---------GLK1(1)     --------->ARR11(3)                     <------ ---------->HVH21--------->LBD16<---------ARR11(3)     <---------AGP1                  <---------YAB1 ---->ZmHOX2a(1)--------->ANAC55(2)         --------->ARR14(2)<---------LBD16    ----------->GT1 ---GT1    <---------KAN4(2)    --------->ARR11(3)<---------AtLEC2        <---------LBD16 <----------   cctcgacatgtcgaatatccgtgacgtctctgtagatatcgcctcgaattcggcatggatctccgccggagcgactctcggagaggtttattatcggatt  11156000  Previous    Next  AGI:  At4g20830.1    Description:  FAD-binding domain-containing protein. Identical to Reticuline oxidase-like protein precursor [Arabidopsis Thaliana] (GB:Q9SVG4;GB:Q3E9Y2;GB:Q8H7B5); similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G20840.1); similar to electron carrier [Arabidopsis thaliana] (TAIR:AT1G11770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42591.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) Range:  from: 11155464    to: 11157817    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version