Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                          --------->ANAC46                                        <---------TOE2(3)                                 ------->GAMYB                                       --------->YAB1                                    --------->MYB46(3)                                      <---------ATHB51                  <---------AHL20(2)--------->RAP2.6(2)        --------->ATHB12              --------->ICU4      <---------ARR11(3)           --------->ARR14(2)        --------->AHL20(2)       --------->ANAC58 --------->MYB59       --------->AHL20(2)--------->DEAR3(1)        <---------AHL20(2) --------->YAB1----------->GT1  --------->ARR11(3)        --------->ANAC46-        --------->ATHB51  <---------ATHB12        <---------TOE2(3)  --------->TOE1(3) --------->MYB52(1) ------->DOF2    <------ZmHOX2a(1)    <---------ATHB12    <---------GLK1(2)       ----------->RAV1(1) ---->GT1     <---------AtLEC2   --------->ANAC58 <---------TOE1(3)  --------->TOE2(3) <---------ARR14(2)   taaagacgaattatttgcaggattactaatcaaactagcaataatgtaaatttaggtttagatttttgtaacattaaaataagcccacataaccgccata  11149800                                                                                           --------->SPL7                                                                                          ------>ZmHOX2a(1)                                                                                     <---------ZAT2           <---------YAB1                                                            <---------At4g35610        <---------YAB1                                                               --------->At4g35610   <---------ICU4                                                              <--------ATHB1  <---------ATHB12                                                             -------->HAHB4 ----->MYB46(1)                   ------->GAMYB                                --------->ATHB12 -------MYB59 <---------YAB1   <-----------GT1          --------->WOX13(1)    --------->ICU4 -------MYB111(1)          --------->AHL20(1)        --------->TOE2(3)        <---------ATHB12 ----->ANAC55(2)           <---------ARR11(3)  <---------ANAC58               <---------YAB1    ----- ----->MYB83--------->YAB1 <---------AHL20(1)  <---------ANAC58        <---------ALFIN1  --------->TOE1(2)   cctaatcaatactattatactaacaacaatatataaccctctaccaattgcttaacatcaatccaaaatagtcccacttaatgattcagctcctacgacg  11149900                                                        <---------O2                                                        <---------TGA1a                                                        --------->O2                                                        <---------ANAC55(1)                                                        --------->TGA1a                                                        <---------ANAC58                                                        <---------ANAC55(2)                                                        =============================================                               <-------TEIL             <---------ANAC46                      -------      <------ZmHOX2a(1)--------->YAB1                   <---------ANAC58                  <---------ARR11(3)     <----------ID1    <---------ICU4             <------ZmHOX2a(2)                       --------->ARR11(3)  --------->REM1(2)   <---------ATHB12   <---------AHL20(2)                              <---------CCA1(2) --------->ALFIN1     --------->ICU4     <---------YAB1 ====================================bZIP_DOF ->NtERF2         ------------>CBF      <---------AHL20(1)                       <----------DOF2   actgtgtaggacaaatgccattcaattatcacatccatctaatattatttggatcaagacgtgtgattctatctatccacaaacttttcatatatctacc  11150000                                                                     <---------AHL20(1)                                                                     --------->AHL20(1)         <------------CBF                                            --------->ARR11(3)       --------->AHL20(2)         --------->ARR11(3)                <---------AHL20(2) <---------ARR11(3)               <---------ARR11(3)               --------->ICU4 --------->ARR11(3)        <---------ARR11(3)          <---------AHL20(2) --------->GLK1(2)  <----------DOF2     --------->ANAC46      ----------->GT1 ==MYC_MYB       <-----------GT1 <---------CCA1(2)    <---------AHL20(2) ->P  ----------->TBP ------------>CBF<-----------GT1 --------->AHL20(2)    <---------ZAT18   aaaaatctataaattgttttcactttcaatttcttatatcttactccacaaactaatttaaaattagtaaatattttgttcacttctgtctagtagtaga  11150100                          ---------->DOF2                       ----------->TBP                                                        <------           ------------>CBF--------->DAG2      <---------HSFB2a(2)                   <----------DOF2    --------->ZAT14  <---------------AGL15<-----------RAV1(1)                   <---------HSFC1(2)  -    <---------ZAT18  ------>ZmHOX2a(1)    --------->MYB52(2)                    --------->HSFC1(2)  <    <---------ZAT14  --------------->AGL15<---------MYB46(3)                 ---------->DOF2  -------   taatacttcactcttcaatcttcctacataaagtcaaacttcatttgttgcagaaaacaaaacaaaaaatatgaaattccaaagcttctttagctctgtt  11150200                                                      --------->MYB52(1)                                                     ----------->HVH21                                                    <---------MYB52(2)  ------>ZmHOX2a(2)                                <---------At4g35610         ------>ZmHOX2a(1) ---ZAT14                                          --------->At4g35610     --------->ARR14(2) -------->ARR11(3)                          --------->LBD16        --------->WOX13(1) ---------ARR11(3)  <----------DOF2       <---------LBD16         <---------ICU4                 ---- -->ZAT14           <---------DAG2    ------>ZmHOX2a(1)-------->P<---------ATHB12       <---------CCA1(2)   ctgatcttcttcactactagtactttacttctatcaattcctcatccggtttcagctaaccggtctaatcaatccagtttcctccaatgtctatctctcc  11150300                                               --------->HSFC1(2)                                              <---------ALFIN1                                           --------->ANAC58                                           --------->ANAC46                                           --------->ANAC58                                         ------>MYB46(1)                                         --------->MYB52(1)                                         ------>MYB83                                        --------->MYB55(1)                                       <---------MYB52(2)                                       <---------MYB46(2)                                       <---------MYB55(2)                                       --------->AtMYB61                                       --------->MYB46(3)                                         <--                                      --------->ANAC58                                            ---                                      --------->ANAC46                                      ---------                                    --------->ANAC46                                        ---------                                    --------->ANAC58                       <---------ICU4  <---------ARR14(2)                                    --------->ANAC58                    --------->REM1(1)  <---------GLK1(2)           ----------->RAV1(1)    <---------ALFIN1                     <-------TEIL        --------->ARR14(2)  <-----------GT1                 --------->ANAC46  <----------DOF2 --------->At4g35610    <---------ARR11(3) ------->GT1           ---------->DOF2--------->ANAC58     ------>ZmHOX2a(1)               --------->ARR11(3)   agttaaacgactccaacatcgtctcaaaagtcatacacacaccaaacgacacttctttctcctcagtcttagcttcatcaatacaaaatcaaagattctc  11150400                                                                                     <------MYB46(1)                                                                                     <------MYB83                                                                                  --------->ARR14(2)                                                                                  <---------MYB52(1)                                                                            --------->ANAC46                                                                            --------->ANAC58                                                                            --------->ANAC58           <---------MYB59                                               --------->ZAT18--------->ARR14(2)           --------->TOE2(3)                                             <---------ZAT18<---------ARR14(2)      <---------REM1(1)                                         --------->At5g28300 --------->MYB59   ------>ZmHOX2a(1)                                           <---------MYB46(3) <---------ARR14(2) ----------->RAV1(2)         ------>ZmHOX2a(1)                 ----------->GT1 <---------DEAR3(1) -------At4g35610           <---------MYB59                  --------->At4g35610<---------MYB46(3) ------>At4g35610 ----------->GT1   --------->LBD16          <---------At4g35610<---------DEAR3(2) >GLK1(2)------->TEIL      --------->YAB1<-----------GT1  <---------ATHB12 --------->SPL7    -------- >ARR14(1)----------------->AG    <---------LBD16       --------->WOX13(1)<---------ALFIN1   --------   tgctcctgatgtacctaaaccggttttaatcctaactccggttcaaccttctgatgttcaatcagcggttaaatgcgcacgccggttcggtatccacatc  11150500                                                                                                  <--                                             --------->ANAC58                                     <--                                             --------->ANAC46                                     ---                                             --------->ANAC58                                   <----                                      --------->ANAC46                                         ------                 --------->ANAC58     <---------ANAC58                                       --------       <---------At4g35610            --------->ANAC55(2)                                    <-------       --------->At4g35610            <---------ANAC55(2)                                --------->YAB1   --------->ANAC46                   <---------ANAC58                                --------->WOX13(1) ->ANAC46        --------->ANAC58    <---------TOE2(2)                          <---------LBD16------ ->bZIP60(2) <------ZmHOX2a(1)       <---------TOE1(2)          ------>ZmHOX2a(1) --------->LBD16 <--   agaacccgaagcggaggacacgactacgaaggcctctcttacgttacacacaaacccttcgtaatcctcgatttaagaaacctccggtctatcacagttg  11150600                                                       --------->ANAC58                                                       --------->ANAC58                         <----             <------MYB46(1)                           <---------ANAC55(2)                   <------NtERF2             <---------DEAR3(2)             <---------ZAT18                                  <-------           <---------MYB55(1)           <---------MYB46(3)                                  --------- -------bZIP60(2)                       ------>ZmHOX2a(2)                              <---------ARR14(2) -------ANAC46                         <------ZmHOX2a(2)                               --------->ARR14(2) ------>O2<---------MYB52(1)    ------>NtERF2          --------->ANAC55(2)          <---------ANAC58 -----DOF5.7(2)<---------MYB52(1)     --------->ARR14(2)                  --------->YAB1    ------>NtERF2 --->WRKY12<--------P          --------->ARR14(2)      --------->ANAC46 --------->GLK1(2)  --------->ANAC46 ->At4g35610 <------MYB83    --------->LBD16--------->ZAT14    --------->At5g28300  <---------ANAC58 --At4g35610 <---------MYB46(3)--------->PCF2          ----------------->AGL1  <----------DOF2 ------ ----->HVH21<---------DEAR3(1) <---------ARR14(2)    <-----------GT1   <---------GLK1(2)  <---------LBD16 -------O2<-----------HVH21<---------LBD16  <---------ZAT14   ----------->GT1<---------TOE1(2)-------   acgtcgataaccggtcggtttgggtccaaaccggagccacgatcggtgaactatattacgaaatcggtaaaaagaatcgtactttagcgtttcccgccgg  11150700  Previous    Next  AGI:  At4g20820.1    Description:  FAD-binding domain-containing protein. similar to FAD-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G44440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69910.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Oxygen oxidoreductase covalent FAD-binding site; (InterPro:IPR006093); contains InterPro domain Berberine/berberine-like; (InterPro:IPR012951) Range:  from: 11150171    to: 11151769    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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