Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <-------GAMYB                     --------->MYB52(2)                     <---------MYB46(3)                     --------->MYB55(2)                                                            --                    <---------MYB55(1)                                                             <-                   <---------MYB52(1)                                                              --                  <---------RAP2.6(3)                                                              <-       ------>ZmHOX2a(1)<---------REM1(1)                                                         <--    ---------->ID1<-------GAMYB                                       --------->At4g35610         --- ----------DOF2  <---------MYB46(3)                              ---------->DOF2 ---------->DOF2  --- -->TOE1(3)    ------>NtERF2                              --------->GLK1(2)  ---------->DOF2     ---- -->TOE2(3) ------>ZmHOX2a(1)                 ---------->DOF2   --------->AHL20(2)               <---   aactttgtcctctcctcggccgttagttgtagcactcgacttctattgaaaagtattgagaatcaataaaagagcagagtaaagaaagaagtgtttagag  11143200                                                                                <------MYB46(1)              <----------DOF2                                        <---------TOE1(1)       --------->DEAR3(1)                                           <---------TOE1(2)   <---------ZAT14                 --------->AHL20(2)               --------->SPL7   --------->ZAT14                 <---------AHL20(2)             --------->TOE1(2)   --------->ZAT18             <---------YAB1                     <---------SPL7<------MYB83 ------->ARR11(3)          --------->ANAC58                       --------->TOE2(2) --------ARR11(3)          --------->ANAC46                      <---------ANAC58 ------->ARR14(2)          <---------ANAC55(2)                  --------------->AtSPL3 --------ARR14(2)          --------->ANAC58                     <---------------AtSPL8 -------GLK1(1)            --------->ANAC55(1)           --------->TOE2(3)   <---------ANAC46 ------>RVE1(1)         <---------REM1(2)                --------->YAB1      <---------ANAC58 ------>GLK1(1)       --------->ZAT14                  --------->ARR11(3)    <---------AtLEC2 ----->ARR11(3)       <---------ZAT18                  <---------ARR11(3)    <---------ANAC58     <-- ------ARR11(3)    ------>ZmHOX2a(1)              ---------->DOF2<---------ANAC58      <-----------GT1   atatctgcacagacctctttcctgtgaacacgcatgataaattgttgttcttcaaagtatcttaatatcgtacgaagttgcttggtgtttaacttcaact  11143300                               <------NtERF2                              ------>NtERF2   --------->CCA1(2)                              <---------RAP2.6(3)                             --------->RAP2.6(2)                             --------->DEAR3(1)                             <---------ATERF1(2)                             --------->ATERF1(2)                      --------->ANAC46                            <---------RAP2.6(2) <---------YAB1<---------AHL20(2)                <---------HSFB2a(2)          --------->ARR11(1)       --------->ANAC58                --------->HSFB2a(2)     --------->YAB1        --------->AHL20(2)           --------->DAG2                <---------HSFC1(1)--------->ANAC58      ----------->GT1     <---------ATHB12 --------DOF2   --------->HSFC1(1)--------->ANAC58---------->DOF2     --------->ANAC58    ---------->DOF2   cttttgccaagtcttcttctcgaacccattgccgcctagcaaacatagatatgaaagtcagtaaataaatataagccaaacaatggactcaaaaaagttg  11143400                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                            --------->ANAC46                                         ------>MYB46(1)                   --------->ZAT18                                         ------>MYB83<---------TOE1(3)   --------->ZAT14                                       <---------MYB59                   <---------ZAT14                                      --------->ANAC46 <------ZmHOX2a(1) <---------ZAT18                                      --------->ANAC55(2)            --------->ARR11(3)          ----------->HVH21         <-----------GT1  <---------TOE2(3)   --------->ZAT18  ------->TEIL               --------->YAB1   <---------GLK1(2)      <---------ARR11(3)         -----   tatgaatctactgtgacaacttaagatgtaatcaaaattcacctaatagaattttgaggatagaaactgaagatgtgcacacaaaccttgtaagcgcgtc  11143500                  ------>ZmHOX2a(1)               <---------ICU4              --------->ARR14(2)       --------->GLK1(1)                 <---------YAB1              <---------ARR14(2)       <---------GLK1(1)               --------->YAB1       --------->RAP2.6(3)<---------------AGL15  --------->ICU4        <---------ICU4      --------->MYB52(1)  --------------->AGL15  <---------YAB1       <---------YAB1   --------->AtMYB61 <---------At4g35610      <---------YAB1          --------->ICU4               -- <-----------------AGL1 ------>NtERF2 --------->ARR14(2)            --------->YAB1                 <- ----------->RAV1(1) --------->At4g35610    <---------At4g35610    <---------YAB1             ------- ---->SPL7   --------->GLK1(1)        <---------ARR14(2)   <---------LBD16--------->YAB1      -------   cagcaccaaaacggcaattcctccgctgccattttttgcagatttcttctgattattgtttttcggagtataattatcatagaaagttttcgctacaagc  11143600       --------->LBD16       ------>ZmHOX2a(1)     --------->TOE1(2)                 <---------ANAC58    ------>MYB83             --------->TOE2(2)    --------->YAB1          <---------ARR11(3)    ------>MYB46(1)   --------->ANAC58          <---------WOX13(1)        --------->ARR11(3) ------->REM1(1)      --------->ANAC58         <------------CBF<---------ANAC58 ----------GT1      ---------->DOF2  --------->AtLEC2      <------------CBF -->ANAC58       --------->AtLEC2    ----------->GT1 ---------->DOF2      <---------GLK1(2) -->ANAC58  <------------CBF--------->YAB1    --------->ATHB12 <---------ANAC46   ttcaccatcctgaaaattgatgcaaagcaaacatatgaaatgcaaaaacgattgataaaggcattgcttgaacatagattttggtagaaaaaatgtttcg  11143700                                                                    --------->ARR14(2)                                                                 --------->MYB46(3)                                                                 --------->DEAR3(1)                                                                <---------LBD16                                                               --------->MYB52(1)                                                              --------->AtMYB61                                                              <---------ALFIN1                                                              ------->GAMYB                                                             <---------MYB52(2)                                                             --------->MYB46(3)                                                       <---------ZAT18                                                       --------->ZAT18                                                      <---------ANAC46                                                     <------NtERF2  ------->TEIL                                                    <---------ATERF1(1)                                                  <---------ANAC58  <---------ARR14(2)                                                  <---------ANAC46----------->HVH21                                                  <---------ANAC58--------->LBD16                                      <---------ANAC58<---------ANAC58                                      <---------ANAC58<---------ANAC58                     --------->ANAC58               --------->DAG2         <---------ANAC55(2)    <---------MYB55(2)            --------->ANAC46              ---------->DOF2       <-----------GT1<---------DEAR3(1)<---------ZAT2        --------->ANAC58     ----------->GT1  <------------CBF--------->ANAC55(2) --------->MYB46(3)    <---------AtLEC2   ctatggatagaaacaaaaaagttgtattgtatagagaattacttgataaatggctggcgcacaaccaccggacctggtttttccatggactacaagccaa  11143800                                                                                            ---------                                                                                            ---------                                                                                       --------->ARR14(2)              <---------ANAC58                                                        <------ZmHOX2a(1)              <---------ANAC46                                                      <---------TOE2(2)              <---------ANAC58                                                      <---------TOE1(2)        <------MYB46(1)                                         <------------CBF --------->YAB1        <------MYB83                                    <---------YAB1          <---------ATHB12       --------->MYB59           <------------CBF  <---------DAG2             --------->WOX13(1)   --       <---------TOE2(3)   --------->ZAT6          <----------DOF2          ------------>CBF---------   agtttgtattaggtttgcgtttgatacaaactctacattgatatagaagactacttttttcatagagattgaaaacagagcaatcacaggattcaagcca  11143900  --------->YAB1                                                             --------->ARR14(2)  ---- >ANAC46                                                            --------->ARR11(3)           <--- >ANAC58          ---------->DOF2             --------->ANAC58    --------->DAG2     <---------ARR14(2) ------->YAB1   --------->ANAC58              --------->ANAC58  ---------->DOF2      --------->ARR14(2) >ANAC58        --------->ANAC58     <-----------------------TaNAC69(2)      <---------ARR14(2)<-----   agaataagaaaactagaaacgaaagaaaaccagttgtgaaacttgaacaaggcaaacagcaagagcaaaaggtattgcaaattggccaatatgctatata  11144000                                     <---------ICU4                                 <-------TEIL                             <---------TOE2(3)                           ---------->DOF2          <---------ANAC58                      --------->AHL20(2)            <---------ANAC58                        <-------TEIL                      <---------AHL20(1)           <-------TEIL         --------->ANAC46 <---------ANAC58                      <---------AHL20(2)          --------->ARR11(3)    --------->ANAC58 <---------ANAC58   <---------ATHB12   --------->AHL20(1)       <---------TOE1(3)        --------->ANAC58<---------TOE2(3) ----->ANAC46         <---------ARR11(3)       <---------TOE2(3)   <---------PCF5      <-----------GT1 --------GT1          --------->ARR11(3) <---------ARR11(3)     --------->ANAC46<---------TOE2(3) ------GT1           --------->AHL20(2)  --------->AHL20(1)--------->ZAT18      <---------TOE1(3)   caccattcaatattgtctcacaaatatattaaaggttcatcagtatattaaggttcttgtgttcacaagggaccacgaaattagggtttttacgttcaga  11144100  Previous    Next  AGI:  At4g20810.1    Description:  transcription initiation factor IIE (TFIIE) alpha subunit family protein / general transcription factor TFIIE family protein. similar to transcription initiation factor [Arabidopsis thaliana] (TAIR:AT4G20340.1); similar to Os08g0343300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061594.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ72889.1); contains InterPro domain Transcription factor TFIIE, alpha subunit; (InterPro:IPR002853) Range:  from: 11141438    to: 11143608    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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