Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------ARR14(2)        --------->ARR14(2)    >>>>>>>>>>ABI3    >>>>>>>>>>FUS3   --------->ANAC58   --------->ANAC58   --------->AtLEC2 -------->MYB46(3) ---------ATHB12 ---->MYB46(1)            --------->ANAC58                                --------->At4g35610 ------>P                 --------->ANAC58                                <---------At4g35610 ---->MYB83              <---------LBD16                --------->MYB52(2)<---------ZAT2 --->MYB83       --------->ARR11(3)        --------->LBD16              <--------P --->MYB46(1)    <---------ARR11(3)       --------->ANAC58           --------->HSFB2a(2) --->ANAC58     <---------GLK1(1)         --------->ANAC58           <---------HSFB2a(2) --->ANAC46     --------->GLK1(1) <---------ATHB12  <---------MYB46(3) <---------MYB52(1)       ----- --->ANAC58     <---------At4g35610       --------->ANAC46        ------>ZmHOX2a(1)        ----------   caaccatgcaaatttgggagctcttcccacggacaaatcaagacccgaaattgtttgttcgtttcatccttctggtagctgaagcttggaagtgagtaat  11128600                                                                                      <---------ALFIN1                                  --------->ANAC58                            --------->TOE1(3)                     ---------->DOF2            <---------ATHB12              --------->TOE2(3) ---->ICU4           <---------ZAT14--------->YAB1                    --------->TOE2(3)       <------ ->GT1         <---------REM1(1)  --------->ANAC58                 <-----------GT1  ------>ZmHOX2a(2)   atttggattcaagggtgatgtagtgaagcgcctcacaagcatacttacaaatcaatggtctggattttgaaacctcataaccttgatcccacttcccttt  11128700                                                 --------->At4g35610               <---------AHL20(2)                <---------At4g35610              <---------YAB1                     --------->ZAT2                         <---------AtLEC2            --------->ATHB12             <---------TOE2(3)       ---------->DOF2      --------->AtLEC2            -------->HAHB4<---------ANAC58       <---------ZAT2<----------DOF2       ------>ZmHOX2a(1)           --------->ICU4 <---------ANAC58<---------REM1(1)   <---------ANAC58      <---------ANAC58 ----DOF2  <---------YAB1 <---------ANAC46<-----------RAV1(1) <---------ANAC58      <---------ANAC58<   gtgcgagttcaaaatgattaatggcattccttgtgctagttttgatgttgcagcttgaagttttgcttaaagtttcaatattgagtccttgcaaggatgt  11128800                                                           <---------RVE1(1)                                                          --------->ARR11(3)                                                          <---------ARR11(3)            <---------DAG2                                <---------GLK1(2)            <----------DOF2                             <---------TOE2(3)         <---------ALFIN1                       <---------YAB1                                  -----   ------->TEIL           <---------MYB46(3)  --------->YAB1                              ----------- ---------YAB1            --------->ATHB12   <---------YAB1<---------CCA1(1)          --------->ICU4   ttatgaaactcacacttttcacatcaaatggttgccaattctcacttattataaatctaagattttttgttagaatttttgaaatgtcagaattgaaata  11128900                                                                      <----------DOF2                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                     <---------ANAC46               <---------YAB1                                <-----------HVH21               <---------TOE1(3)                           --------->LBD16                      <----         --------->DAG2                                   --------->ANAC55(2)            --------->YAB1        ---------->DOF2                                   <---------ANAC58              --------->ICU4     --------->TOE1(3)              <---------LBD16      <---------LBD16    --------->DAG2     ------     --------->YAB1       <-----------GT1      ----------->GT1 --------->ETT(2) <---------MYB46(3) ----->DOF2    <---------TOE2(3) <----------DOF2<-------GAMYB--------->REM1(2) --------->ALFIN1------ >GT1--------->TOE2(3)   <-----------GT1<---------ARR14(2)<---------ANAC58 ---------->DOF2 <---------YAB1   aagtttaccataaagttatggtttttatttcccatctttggggaaatggcagttaaattcccgtgtcgatggctttgaaaagtggttgcatttatgatcc  11129000                                                                                     <------MYB46(1)                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                --------->ALFIN1                                                                               ------->MYC3                                                                               <-------MYC3                                                                               ------->MYC2                                                                               <-------MYC2                                                                               <-------PIF5                                                                               ------->PIF5                                                                              <------NtERF2                                                                              <---------ANAC58                                                                              --------->ALFIN1                                                                              <---------TGA1a                                                                              <---------ANAC58                                                                              <---------ANAC46                                                                             ------>NtERF2                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                            <---------ANAC46                                                                           --------->ATERF1(1)                                                                           <------NtERF2                                                                          <---------ATERF1(1)                                                                          ------>NtERF2                                                                          --------->ABI4(2)     <----                                                                         <---------DEAR3(1)    <-----                                   --------->DOF5.7(2)                   --------->ALFIN1     <------          <-----------GT1          <---------MYB52(1)                    ----------->HVH21    ------>NtERF2        --------->AHL20(2)       <---------ICU4                         <-----------HVH21     <------        <---------AHL20(2)       --------->YAB1                        <---------MYB46(3)    -------- <----------DOF2                <---------ATHB12       --------->ZAT6 --------->ALFIN1       -------- -----ALFIN1                   ------>MYB46(1)      --------->YAB1    <---------DEAR3(1)    --------- --->MYB46(3)             *TSS ------>MYB83        <---------ATHB12<------ZmHOX2a(1) <------MYB83 >ZmHOX2a(2)              <-----------GT1 <---------CCA1(2)      --------->ALFIN1  <---------ANAC46   acccttttattttaatcacacatccgaattaccaatcgttacccatttcttcaatgaacactctggtgaggagcggtggcgcgtggctggtatcgccgtc  11129100          --------->ATERF1(1)          <------NtERF2         <---------RRTF1(1)         <---------RAP2.3(1)         <---------ERF1         ------>NtERF2         <---------ATERF1(1)         <<<<<<<<<AtERF-4         <<<<<<<<<AtERF-5         <<<<<<<<<AtERF-3         <<<<<<<<<AtERF-1         <<<<<<<<<AtERF-7                         <---------ICU4         <<<<<<<<<AtERF-2                         --------->YAB1        <<<<<<<<<<AtTINY2                        --------->ICU4        <---------RRTF1(3)                    --------->TGA2(2)        <---------ANAC46                     <-----------TGA1        --------->ATERF1(2)                 --------->ANAC55(2)        <---------ATERF1(2)                 --------->ANAC58        <---------DEAR3(1)                  <---------ANAC55(2)        <---------RAP2.6(2)                 --------->ANAC46        <---------RAP2.3(2)                 --------->TGA1a        <---------ANAC58                    <---------O2        <---------RRTF1(2)                  ========================================bZIP_DOF        <---------ANAC58                    <---------TGA1a       --------->RAP2.6(3)                  --------->bZIP60(1)               --------->ALFIN1      -     --------->ALFIN1                       <---------bZIP60(1)            --------->DAG2           < -----WRKY12                                --------->ANAC58               <---------AtMYB61        - -NtERF2<---------RAP2.3(3)                 --------->bZIP60(2)          ---------->DOF2            < -----HVH21                                 --------->O2        ----------------->AGL1              - ---RAP2.6(3)        <------ZmHOX2a(1)     <-----------STF1    <-----------------AG                 < ->DEAR3(1)<---------ARR14(2)              <-----------bZIP910(1) ------>ZmHOX2a(1)                 - ->RAP2.3(3)  ----------->HVH21 <---------ANAC46 <---------YAB1<-----------------AGL1           ----- >RAP2.3(1)--------->ARR14(2)  ----------------------->TaNAC69(2)<---------MYB59       <---------AtLEC2   aatggcagtggcggctctgaagaggatgagagtgtctggtttagccacgtcatcatcatcttctgttcctaattggaaaggtggagtttccatggtccaa  11129200      --------->LBD16     <---------HSFB2a(2)     --------->HSFB2a(2)                                                  ------>ZmHOX2a(1) -------->HSFC1(2)                                                        --------->LBD16 ---------HSFC1(2)                                                        =========================== -------->HSFB2a(1)                                                   --------->ARR14(2) ---------At4g35610                                                   <---------ARR14(2) -------->ZAT2                                                    XXXXXXXXXXXXXXXXXXXX>MIR2111A/B ---------HSFB2a(1)<---------HSFB2a(2) --------->YAB1             =================================== -------->At4g35610--------->HSFB2a(2) --------->TOE2(3)          ----------------->AG              - ---->ANAC46  <---------AtMYB61     <----------DOF2     <----------DOF2   ===========================   ggagcttccagaggcattggtctcgaatttgtgagcctctttcttaatccatttctctctttcatttacccaaatcctgaaatttagtgactcatttgag  11129300            <---------At4g35610   ------>ZmHOX2a(2)   <-----------------AGL3   <-----------------AGL2                                   <---------ANAC58  <------ZmHOX2a(2)                                         <---------ANAC46  --------->CCA1(2)                                     <---------At4g35610 >>>>>>>>>GATA-3                                    ----------->RAV1(1) >>>>>>>>>GATA-1                                    ------------>AtMYB77 >>>>>>>>>GATA-4                                   ----------->HVH21 >>>>>>>>>GATA-2                                   --------->ANAC58 --------->AGP1                                   --------->SPL7 <---------ARR11(3)                               <-------TEIL --------->ARR11(3)                <---------bZIP60(2)  <-------GAMYB ========HOX2a_HOX2a        <----------DOF2   <---------------AtSPL3               <-----------RAV1(1) ====================MADS_MADS    <---------TOE2(3)--------->ANAC58              <--------P   <------ -------->GLK1(1)           <---------DAG2 <----------DOF2  <---------ANAC58    <---------MYB52(1)  < =========HOX2a_HOX2a     <---------At4g35610 --------->MYB59           --------->YAB1        <------   agagatctaaatttggctgatttagttcagctttttgacgttgctctttaggtacgacagttgctggagaacaataagaacgggtatgttgttgctactt  11129400             --------->ANAC46        ---------->DOF2      <---------------AGL15      --------------->AGL15                                                                        <-     ----------------->AGL3                                                                        <-     ----------------->AGL2                                                                  <-------  --------->GLK1(1)                                ---------->DOF2                          -------->P ---ANAC58   --------->ANAC58              <---------MYB52(1)      ---------->DOF2      ------->TEIL ---------RAP2.6(3)                   --------->ARR14(2)       --------->AtLEC2    --------->At4g35610 ---ANAC58   --------->ANAC58         <---------ARR14(2) <----------DOF2           <---------At4g35610   gccgaaatccaaaagaagcaacaagtctctctgatttgaagaaccgtttctctgaaagacttttcatccaaaagcttgatgttacagatgaaactaccat  11129500  Previous    Next  AGI:  At4g20760.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G51030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42623.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 11129026    to: 11130781    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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