Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ANAC55(2)                                                            --------->ANAC58                                                            --------->ANAC46                                                            --------->ANAC58                                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                     --------->ANAC58                                      --------->TOE2(3)   <xxxxxxxxxxxxxxxxsmallRNA(i)                                      --------->TOE1(3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                 <---------SPL7      --------->ANAC58               --------->STY1(2)                    ---------->DOF2------->TEILxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <---------STY1(2)                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2) --------->ANAC46               --------->ZAT2            ------->TEIL        --------->ANAC46  <------ZmHOX2a(2)  <---------CCA1(2)       --------->At4g35610      --------->ANAC55(2)xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) >GT1  <---------At4g35610 ------>NtERF2   ---------->DOF2<---------ALFIN1          <---------ZAT2   tcgttttatagctgaaccttgtaaaaggctgcctacgtacccttagaaagggatcaagccacacgtagttcatatcgcgataaacgagctaggccattac  11097600                                                                                           --------->MYB46(2)                                                                                           --------->MYB59                                                                                           --------->MYB52(2)                                                                                           --------->MYB111(1)                                                                                           ----------                                                                                        <<<<<<<<<<<MYB80                                                                                       <------MYB83                                                    ----------->TGA1                   <------MYB46(1)                                                    ----------->HVH21                 --------->MYB59                                                  --------->ANAC55(2)                <--------P                                                  <---------ANAC55(2)            <---------ANAC58                                               <---------ARR14(2)                <---------ANAC58                                               --------->ARR14(2)              --------->ALFIN1                                              <------NtERF2                   --------->TOE1(2)                                             --------->LBD16                  <xxxxxxxxxxxxxxxxxxxxxx                                             <---------MYB46(3)              <---------ANAC58                                            <---------ANAC46                 ========================                                           <---------LBD16                   <---------ANAC46                                          --------->LBD16                    <---------TGA1a                                        ------>ZmHOX2a(2)                    --------->TGA1a         <---------SPL7                 <---------LBD16<---------bZIP60(2)   =================MYC_MYB     <------MYB46(1)                  --------->ARR14(2)                     <---------ANAC58    <---     <------MYB83    --------->MYB46(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) =================MYC_MYB  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------ARR14(2)                     <---------O2<--------P  <------ZmHOX2a(1)  --------->MYB59----------->ARR10  <---------ANAC46      --------->O2<---------MYB52(1)   tggaggaaggtcgtatgtcgagttaggcagttttagggatgatccggcggataagtgacgagttgaatagcttcttgagacgtgcgagtaggttagttac  11097700                                                                                                    <                                                                                                 xxxx                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                          -----------                                                                                        <---------At4g35610                                                                                        --------->ZAT2                                                                                        <---------ZAT2                                                                                        --------->At4g35610                                                                                      --------->ZAT18                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx              <------NtERF2                                                         <-----------HVH21     <------NtERF2                                                                xxxxxxxxxxxxxxxxxxx     ------>NtERF2            ----------->HVH21                                   xxxxxxxxxxxxxxxxxxx   <---------ANAC58          --------->DEAR3(2)                                   xxxxxxxxxxxxxxxxxxx   <---------ANAC46         --------->SPL7                                        <---------MYB46(3)<   <---------ANAC58       <---------SPL7                                          xxxxxxxxxxxxxxxxxxx ->GT1      <---------DREB2C(2)                                               <---------SPL7  xxxxxxx xsmallRNA(si3)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                ----------->HVH21xxxxxx =======bZIP_DOF     <---------HSFC1(2)                                  <-------TEILxxxxxxxxxxxxxxxx -------DOF2<---------DEAR3(1)<---------SPL7                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<   tttgggcgggcaagtcggcgagacacttcggacggacgagtaaacgagctactcaagatagatgggcaaacgaggtacttcggacgggtgagctgacgag  11097800                                                   --------->HSFC1(2)         <---------ANAC46                                                   <---------HSFC1(2)         <---------ANAC58                                                 <---------ARR11(3)        xxxxxxxxxxxxxxxx>smallRNA(i)                                               ----------->ARR10          --------->ZAT2                                        <------NtERF2                     <---------ZAT2                                        ----------->RAV1(2)               <---------At4g35610 ---------ANAC46                        --------->ZAT2                    --------->At4g35610 xxxxxxxxxxxx>smallRNA(i)               <---------ZAT2              ----------->HVH21 ---->ZAT2                              <---------At4g35610       --------->ZAT2 -----ZAT2   <---------ARR14(2)         --------->At4g35610       <---------At4g35610      <------NtERF2 ---->At4g35610                         --------->ATERF1(1)       <---------ZAT2           ------>NtERF2 -----At4g35610------>ZmHOX2a(2)       <---------ATERF1(1)        --------->At4g35610     --------->ZAT18 >HVH21      --------->ARR14(2)        <---------RAP2.6(3)      xxxxxxxxxxxxxxxx>smallRNA(i) x>smallRNA(i)<------ZmHOX2a(2)        ------>NtERF2            xxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxx>smallRNA(se3)                <---------DEAR3(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxx>smallRNA(si3)               <---------RAP2.6(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxx>smallRNA(si3)                    <---------DEAR3(1)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxx>smallRNA(fl3)               --------->ATERF1(2)   <---------MYB46(3)<---------ANAC58 xx>smallRNA(si3)                     <---------ATERF1(2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxx>smallRNA(se3)                   --------->RAP2.6(3)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxx>smallRNA(si3)                   --------->ATERF1(1)----------->HVH21xxxxxxxxxxxxxxxx>smallRNA(i) ---------ANAC58                    <---------ATERF1(1) <---------SPL7  xxxxxxxxxxxxxxxx>smallRNA(i) xx>smallRNA(le3)         <---------ANAC58   <---------ANAC58   --------->ZAT18          <---------ANAC58 xxxxxxxxx>smallRNA(i)    <---------ANAC46   <---------ANAC58  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxx>smallRNA(i)   <---------ANAC58   <---------ANAC46 <-----------HVH21          <---------ANAC58 xxxxxxx>smallRNA(se3)<---------At4g35610   <------NtERF2   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<----- ---------ANAC58      --------->At4g35610 <---------DEAR3(1)xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)------   ctgcttgagacgggcgatctgataagctgcttgagacgggccggctggcgagatacttcggacgggtgagctgacgagctgcttgagacgggcgggctga  11097900                           xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    ----------->TGA1                    ----------->HVH21                  --------->ZAT2                                                     <----------DOF2                  ----------->RAV1(2)                                            <------MYB83                  <---------At4g35610                                            <------MYB46(1)                  --------->At4g35610         ----------->HVH21         ----------->HVH21               --------->DEAR3(2)           --------->At4g35610        ------>ZmHOX2a(2)              --------->ARR14(2)        <-----------HVH21<--------P   <---------At4g35610           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <-------GAMYB --------->At4g35610        <xxxxxxxxxxxxxxxxsmallRNA(i) =============================MYC_MYB       <---------AtMYB61       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------At4g35610       <------ZmHOX2a(2)   xxxxxxxxxxxxxxxx>smallRNA(i)<-----------HVH21       <---------MYB46(3)      <--------P         --- ----At4g35610<---------ARR14(2)     <---------TGA1a<---------ZAT2   <---------ARR14(2)           <-- --->At4g35610--------->MYB52(1) <-----------RAV1(2)--------->ZAT2   --------->ARR14(2)  ---------->ID1   tgagctacttgagacggaccggctgacgagatgcttcagacgggtgagatgacgagctggttgagacgggcgatctgacgagttggtctttgtctctaag  11098000                                                                        ------>ZmHOX2a(1)      <xxxxx                                             <xxxxxxxxxxxxxxxxsmallRNA(se3)                 ------>MYB83                                        --------->LBD16             --------->ANAC58        <xxxxxxxx                <---------ALFIN1       <---------ANAC58             --------->ANAC58        -------->P         --------->GLK1(1)             <---------ANAC46          <---------ZAT18            ------>MYB46(1)         <---------GLK1(1)             <---------ANAC58          --------->ZAT18        <xxxxxxxxxxxx         <---------ARR14(2)            --------->ANAC55(2)   --------->ALFIN1           ------->TEIL         --------->ARR14(2)            <---------ANAC55(2)  --------->REM1(2)         xxxxxxxxxxxxxxx        --------->ARR14(2)--------->ANAC58 <-----------TBP  <---------ZAT14         xxxxxxxxxxxxxxxxx        <---------ARR14(2)--------->ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <xxxxxxxxxxxxxxxx      --------->LBD16----------->HVH21 <---------ANAC55(1) --------->ALFIN1        <-----------GT1    <---------LBD16 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------ANAC58          xxxxxxxxxxxxxxxxxx  ------>ZmHOX2a(1)<----------DOF2    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <xxxxxxxxxxxxxxxxxx ------>ZAT18  <---------ALFIN1--------->ANAC58          <---------ANAC58  --------->LBD16  xxxxxxxxx -------ZAT18 <---------ALFIN1 --------->ANAC58          <---------ANAC46xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   tgtcctcgcggaatcccccccctttgacaagacatgctattccgtatttatagccttctgcgtgtagggcactcctccagggttttgacgagcctaccct  11098100                        xxxxxxxxxxxxxxxx>smallRNA(i)                        --------->WRKY12                      <----------DOF2                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               <xxxxxxxxxxxxxxxxsmallRNA(i)             <---------At4g35610            <---------YAB1 <---------ANAC46            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       --------->ANAC58         <xxxxxxxxxxxxxxxxsmallRNA(i)            --------->ANAC46                       --------->YAB1     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       --------->ANAC58                       ----------->RAV1(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         --------->AtLEC2                     --------->ARR14(2) xxxxxxxxxxxxxxxxxsmallRNA(le3)                  --------->ANAC58                     <---------ARR14(2) xxxxxxxxxxxxxxxsmallRNA(le3)   <---------ARR14(2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------>ZmHOX2a(1) xxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <---------ALFIN1 xxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         ------------>CBF xxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 --------->MYB52(1) =========== xxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        -------->P--------->At4g35610 xxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <-----------ARR10    ------>NtERF2------- xxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------CCA1(2)   --------->ATERF1(1) xxxxxxxxxxxxx>smallRNA(si3)    --------->ARR14(2)   --------->ANAC58 ----------->HVH21<---------ATHB12   cttgacttaacattctgcttaggcctttgacttggatttgggccttgggccaagcaagcccaaatctaacccctaacagttgccccccaatcctgatgca  11098200                 <------ZmHOX2a(1)              <-----------RAV1(2)             <------ZmHOX2a(2)            <---------ARR14(2)            --------->ARR14(2)       <---------ANAC58       <---------ANAC58       <---------ANAC46       <---------O2<---------GLK1(1)       <---------TGA1a       <---------bZIP60(2)       ==========================================MYC_MYB    <---------ANAC46       --------->O2--------->GLK1(1)                       <------NtERF2      ----------->STF1                                     <---------LBD16     <---------TGA2(2)                              ---------->DOF2    ----------->TGA1                              --------->ANAC58                    <----------DOF2    ----------->HVH21                             --------->ANAC58                  <---------At4g35610 ===================HOX2a_HOX2a          ------->GAMYB--------->DAG2                --------->ZAT2 -->ZAT18--------->ALFIN1             --------->MYB52(1)<-----------HVH21--------->ANAC46 <----------DOF2   ctgttgatgacgtggatcaggatttcaagtgttcgactcttaaccgaaggaaacgaaaggtcgcgcatggggaaaacgcgatgtccagctttcttttgca  11098300                                  <---------MYB52(1)                          <---------ANAC58                                                        <--                          <---------AtLEC2        <--------HAHB4                              -------                          <---------ANAC58        <---------ICU4                          --------->HSFB2a(2)                     <---------ANAC58            <---------YAB1                          <---------LBD16                     <---------ANAC58   <---------ANAC46  --------->ANAC58               <---------ANAC46              <---------ARR11(3) <---------RAP2.6(3)      --------->ANAC58              <---------LBD16              <-----------ARR10  <-------GAMYB   --------->ICU4                   <---------ANAC58<--              --------->ARR11(3)<---------MYB46(3)--------->YAB1                  <---------ANAC58<--   tttttcgaggctccaatatctaggcgttgcatggccgttgtggcataggtgatcattacaacgctattcccataggcgtaatgagcttgtctcgggaatt  11098400                                                                 <-------TEIL           --------->HSFB2a(2)                                  --------->CCA1(2)    <---------ANAC58                   <-----------GT1         <---------SPL7    <---------ANAC58        <----------DOF2                  --------------->AtSPL3    <---------ANAC58 -------ANAC58              --------------------->WRI1   <---------At4g35610           <---------ANAC58 -->GLK1(1)<---------HSFB2a(2)    ------>ZmHOX2a(2)      --------->At4g35610     <----------DOF2 -------ANAC46           ------>ZmHOX2a(1)           <---------DAG2      <----------DOF2           -- -------ANAC58           ================HOX2a_HOX2a <----------DOF2  <---------ARR11(3)      <------   gcttatgcgtcttctataagtactgtcctcctttgatcgtttcacccttcaatcgctttagcagaggtacgagttctttctctcttttgtcttgttttga  11098500  Previous    Next  AGI:  At4g20690.1    Description:  unknown protein Range:  from: 11097253    to: 11098035    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g20700.1    Description:  similar to RNA binding / RNA-directed DNA polymerase [Arabidopsis thaliana] (TAIR:AT4G20520.1); contains InterPro domain Protein of unknown function DUF1204 (InterPro:IPR009596) Range:  from: 11098281    to: 11100066    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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