Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------ANAC58                                                           <---------MYB46(3)                                                           <---------ANAC46                                                           <---------ANAC58                                                           <---------bZIP60(2)                                                    --------->SPL7                                                    --------->ZAT14                                                    <---------ZAT14--------->ATHB51                                                    --------->SPL1(2) --------->AHL20(2)                                                  <---------SPL7   <--------HAHB4                                                  <---------ZAT14  <---------ICU4                                         --------->At4g35610<-------GAMYB                         <---------AHL20(1)       --------->ZAT14 --------->ICU4                <xxxx                         --------->AHL20(1)    <------------------SPL14                        <-----          --------->MYB52(1) <-----------GT1  ------->TEIL<------NtERF2         ----------->GT1------  --------->TOE2(3)----------->GT1  --------->CCA1(2)   --------->ALFIN1<---------ANAC55(2)  <-------   aaaacatcaaacttacagagagagtaatatataacatgatatgagatgaaactgtacggtgtcgttgcataattacataaactagttataaactcacaca  11077600                                                                                                 <xxx                                                                                             <------NtERF2                                                                                             ------>NtERF2                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                  <---------DAG2            ---------                                                     <xxxxxxxxxxxxxxxxsmallRNA(i)           ---------                                                    --------->TOE2(2)                      <---------LBD16                                                    --------->TOE1(2)                 <xxxxxxxxxxxxxx                               <---------ANAC58     --------->TOE1(3)             <-----------HVH21    xxxxxxxxxxxxxxxx>smallRNA(i)      <---------AHL20(2)          <----------DOF2------>ZmHOX2a(1) xxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->AHL20(2)        xxxxxxxxxxxxxxxx>smallRNA(i)--------- ----ALFIN1                    <---------ANAC58    --------->HSFB2a(1)         ----------->RAV1(2) --->ANAC46                    <---------ANAC46    <---------HSFB2a(1)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --ALFIN1           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <----------DOF2   ------>NtERF2--------->RAP2.3(1)   ctgccttcatttcaggtcgagacagaacttattgtgtgatttaaatcagacaaaccttcgaactttgactttttcatcgcctcctgtcccttcgccgcaa  11077700                                                                                          --------->TOE2(3)                                                                                         <---------bZIP60(1)     <---------ZAT6                                                                   ----------->HVH21 xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                <---------ANAC46 ->LBD16                                                                          <---------ANAC58 >ANAC46<---------REM1(2)                                                         <xxxxxxxxxxxxxxxxxx >RAP2.6(2)                              <----------DOF2                        <xxxxxxxxxxxxxxxxxxxx >RAP2.3(2)                           <-----------GT1              --------->WOX13(1)<xxxxxxxxxxxxxxx >RRTF1(2)                   ------>ZmHOX2a(1)    <---------HSFB2a(2)        <-----------RAV1(1) xxxxxxxxxsmallRNA(si3)    ----------->RAV1(2)    --------->HSFB2a(2)      xxxxxxxxxxxxxxxx>smallRNA(i) >DEAR3(1)            ------>ZmHOX2a(1)  <---------DAG2          ------------>CBF <---------ANAC58   aatactagtctaaacgctcaactcctctctcctgtcttataaacttttttttttagaaaatgagatgatcaatcgaattttgttgtgtgtgacctcaaac  11077800              --------->YAB1              ----------->GT1            <------------CBF       <---------------AGL15       ===============================================================MADS_MADS       --------------->AGL15  <---------AHL20(2)                      --------->WOX13(1)       --------->HSFB2a(2)   <---------AHL20(1)                     ------------>CBF       <---------HSFB2a(2)   <---------AHL20(2)                    --------->YAB1                 --- xxxxxsmallRNA(si3)          --------->AHL20(2)  ------->TEIL ------------>CBF               -------- xxsmallRNA(i2)         ------------>CBF ---------->DOF2<----------DOF2                     <-------- xxxxxxxxsmallRNA(fl3)<-----------GT1 --------->YAB1  --------------->AGL15               -----------   tgacaacttccagtaattgtaatattaccaattttttttatcaaaaagatgaacttcactttagagcaatagcaatccctcgagtctcccctatataaag  11077900                                                                                            <--------                                                                                            ---------                                                              ------------>CBF              <--------                                               --------->RVE1(1)   <---------ARR11(3)       <--------                   <---------At4g35610   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              <--------           <---------TOE2(3)          --------->ANAC46 <---------ARR11(3)                   ---------          <---------DOF5.7(2)         --------->ANAC58 --------->ARR11(3)                  <---------CCA1(2)       --------->TOE1(3)              --------->ANAC58--------->GLK1(1)             ------>ZmHOX2a(2) ------>GLK1(2) <-------TEIL        --------->ANAC58  <---------GLK1(1)            <---------At4g35610 -->DOF2------>ZmHOX2a(1)           <---------ALFIN1  <---------RVE1(1)           <---------AGP1 -AHL20(2)--------->MYB52(1)        --------->ANAC58 <---------ARR11(3)           <---------ARR14(2) >TBP  --------->TOE2(3)            --------->ANAC46 --------->ARR11(3)           --------->ARR14(2)   attccaactccttaacgattcatctaatgaaaaaacacacacaccaaaaatatcagatatctcaaacaatgtcttcagtttttggatctgtccatatctt  11078000                                                              <---------ARR14(2)                                                              <---------ARR11(1)                                                              --------->GLK1(2)                                                              <-----------ARR10                                                              --------->ARR14(2)        --------------->AtSPL3                                ------->TEIL   --------->ATHB12                                          <---------CCA1(2)            --------->ANAC58   --------->YAB1                                            <---------ARR14(1)       --------->ANAC58  --------->ICU4                                           --------->ANAC55(2)        --------->ANAC46  <---------YAB1                                           <---------ANAC55(2)        --------->ANAC58 -ARR14(2)                                                 <---------ANAC58       ----------->RAV1(1) >ARR11(3)                                       <---------DAG2                 --------->At4g35610 -ARR11(3)                                       --------->TOE2(3)  ----------->RAV1(1)   --------->ANAC58 ---ARR10              ------>ZmHOX2a(1)         --------->TOE1(3) --------->ANAC46 <---------ALFIN1 -ARR11(1)          ------>ZmHOX2a(1)            <---------MYB59  --------->ZAT18<xxxxxxxxxxxxxxxxxxx >ARR14(2) --------->AtLEC2 --------->ANAC46   ------->TEIL<---------ANAC58     <---------At4g35610   ggccatgatagccatacaactcctccttacacacagtgtttcatctctgaaccttaccaatgcgtatctgcaccacaaatgcagcaacactcaaggaaaa  11078100                                                                                      --------->REM1(1)                                                                                      <---------ALFIN1                                                                                  --------->LBD16                                                                                  <---------At4g35610                                                                              <---------ARR14(2)                                                                       ----------->TGA1  <xxxxxxxxxxx                                                                       ----------->HVH21 --------->DEAR3(1)                         <---------ARR11(3)             --------->ATHB12------------>AtMYB77                  <---------HSFC1(1)                 --------------->AGL15    --------->ARR14(2)                  --------->HSFC1(1)                <-----------------AGL1<---------ANAC46      <xxxx                  <---------HSFB2a(2)             <---------ALFIN1   <---------ANAC58<---------ZAT14            <---------ZAT18  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------ANAC58--------->ZAT14            --------->ZAT18--------->TOE2(3)    <-----------HVH21    --------->ANAC55(2)--------->ANAC46   <-----------RAV1(2)   --------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  --------->ANAC46 --- xxxxsmallRNA(i2) --------->HSFB2a(2)   ------>ZmHOX2a(1)          <-----------GT1--------->At4g35610   tataagcaggggagcgcgttcgagaaaaatctcaacttagtcctcagtaccatcacctcgattggaaattttcgtgacggtttccgctacaccgaagaag  11078200                                               ------>ZmHOX2a(1)                                          --------->ATERF1(1)                                         ------>NtERF2                                         <---------ATERF1(1)                                        --------->DEAR3(1)                             <---------LBD16                                        <---------DEAR3(1)                         ------>NtERF2                                       --------->ATERF1(1)                         <-----------HVH21                                       --------->RAP2.3(1)                        --------->RAP2.3(3)                                       ------>NtERF2                              --------->RAP2.3(2)                                       <------NtERF2                              --------->DEAR3(1)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     --------->DEAR4(2)                                      <---------ATERF1(1)                        --------->RAP2.3(1)          <---------ATHB12            --------->LBD16                          <---------ALFIN1     ------>ZmHOX2a(2)               <---------ANAC46                          --------->DREB2C(2)    <------ZmHOX2a(2)                <------NtERF2                             --------->DEAR3(1)   <---------ARR14(2)                <---------DEAR3(1)                       --------->MYB46(3)   <---------ARR11(3)               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->ARR14(2)               <---------LBD16             <---------ALFIN1------>NtERF2   --------->ARR11(3)              <---------ANAC46            ------>NtERF2  --------->DEAR4(2)  <------ZmHOX2a(1)                <---------bZIP60(2)        --------->DEAR3(1)--------->ABI4(1) xxxxxxxxxxxxsmallRNA(se3)       <-----------HVH21          <---------ZAT18   --------->ORA47(2) xxxxxxxxxxxxsmallRNA(i)        --------->ALFIN1            --------->ZAT18   --------->DEAR3(2) <--- ------>ALFIN1   <----------DOF2<-----------RAV1(1)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  -----   gtgaggatcccaataacgtctttgtcatgttccagtgtcgcggcgactcctactggtccaagtgccccccttgcattagcaccgccgtctctggggtaat  11078300                                                                        --------->AHL20(2)                                                                   <---------MYB52(1)                                                                  <-------GAMYB                                                                 ----------->GT1                                                                 <---------DEAR3(2)                                                                 <---------MYB46(3)                                                                <---------TOE2(2)                                                                <---------DEAR3(1)                                                             <---------TGA1a                                                             =============MYC_MYB                                                             --------->O2                                                             <---------O2                                                             --------->ANAC46                    --------->At4g35610                      --------->TGA1a              <---------AHL20(2)                             --------->ANAC58              --------->AHL20(2)     ----------->GT1         --------->ANAC58             <---------YAB1        <---------ANAC55(1)  <---------ZAT18 <---------AHL20(2)         --------->AHL20(2)        <---------ANAC46   --------->At4g35610                     <------     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------ICU4  <---------ALFIN1        <---------CCA1(2)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->ICU4--------->ZAT18 <---------ICU4--------->TOE2(3) ------ICU4--------->YAB1         <-------TEIL  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->TOE1(3) ---->ICU4<---------YAB1      ----------->GT1   <---------YAB1<-----------HVH21<-----------HVH21   tgtgacttcaatattataaattagcagtcatatagttacatgtaaaaattacgatgagcacacacgtcggttaattttttctgtcaaatcttaaatatgt  11078400                            <---------WOX13(1)         <---------YAB1   --------->ATHB12         ------>ZmHOX2a(1)-------->HAHB4       ------>ZmHOX2a(2) <---------ATHB12     <---------ARR11(3)  <---------YAB1     --------->ARR11(3)  --------->ICU4    --------->YAB1   --------->AHL20(2)   --------->ICU4--------->AHL20(2)             <---------WOX13(1)          <---------YAB1   <---------ATHB12  <---------AHL20(2)   --------->MYB52(1)   ----------->GT1  --------->AHL20(2) -----RAV1(1)  <----------DOF2      <----------ID1      ---------->DOF2     --------->ICU4   gggcaatgatcctgatactttatataaatgattgaattgagacaaaactgatagacattaaaggctagttaaaaaatactgattaaacaatgcaatattg  11078500  Previous    Next  AGI:  At4g20620.1    Description:  receptor-like protein kinase-related. similar to receptor-like protein kinase-related [Arabidopsis thaliana] (TAIR:AT4G20630.1); similar to receptor-like protein kinase-related [Arabidopsis thaliana] (TAIR:AT4G20610.1); similar to receptor-like protein kinase-related [Arabidopsis thaliana] (TAIR:AT4G20640.1); similar to unknown protein [Arabidopsis lyrata] (GB:AAN46206.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902); contains InterPro domain Protein of unknown function DUF1204 (InterPro:IPR009596) Range:  from: 11077969    to: 11080317    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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