Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       -------->P                     ------>MYB83                     ------>MYB46(1)                     --------->MYB52(1)                  --------->DEAR3(2)                 ------->TEIL                 <---------ARR14(2)                 <---------TCP15(1)                 --------->PCF2                 <---------TCP20                 --------->ARR14(2)                                                             <----              --------->ANAC55(1)                                                               -----              --------->ANAC58                               <---------AHL20(2)              <-------              --------->ANAC46                       --------->ARR14(2)                      <-------          --------->CCA1(2)       --------->YAB1     <---------ARR14(2)                ------>NtERF2     <---------MYB52(1)--------->MYB46(3)          --------->LBD16             --------->ARR14(2)   <---------ANAC58 <---------ALFIN1             <---------LBD16               <---------ARR14(2)  --   <---------ANAC58--------->MYB46(3)       --------->HSFB2a(2)       --------->LBD16 <---------PCF2   <---------ANAC46<---------MYB55(2)       <---------HSFB2a(2)      <---------HSFB2a(2)     -------- >ZmHOX2a(1)  --------->ANAC58   <---------YAB1<---------ARR14(2)    --------->HSFB2a(2)     -------- -->TOE2(3)  <---------LBD16   --------->YAB1  --------->ARR14(2)    <-----------RAV1(2)  ---------->DOF2   aaattccgtttgatacacggacccaccagtcgagcatcatagccatcgggaaccggaaacgattttatgtcccagaagaccgatactggggccaaagctg  11035500                      <---------ALFIN1              <---------ATERF1(1)  ------>ZmHOX2a(1)--------->REM1(1) -----ATERF1(1)--------->ATERF1(1) ->NtERF2  <---------ATERF1(1) --ZAT2   <---------DEAR3(1) --At4g35610 <---------DEAR3(1)  --------->At4g35610 ---->NtERF2--------->ATERF1(1)<---------ICU4            ---------->DOF2 ->ZAT2  <---------LBD16       --------->ATHB12--------->TOE1(3)                   --------->YAB1 ->At4g35610<------NtERF2     <---------YAB1   --------->TOE2(3)              --------->WRKY18(1)   <   cctcctcgataggcggaggctccatcaccctcatcatcggaaaatcaaaccttaaaaaaaaaagaatcaaattcaattcagtcaaacatcagagaaccga  11035600          --------->At4g35610       <---------At4g35610     --------->ANAC58                                                                   --------->AHL20(2)     --------->ANAC58                                         <---------ANAC58       ----------->GT1     --------->ANAC46                        <---------ATHB12 <---------ANAC46      ----------->GT1--   <---------ALFIN1               <---------CCA1(2)     ------->TEIL        --------->YAB1     ------ ------ZmHOX2a(1)    <---------REM1(1)     --------->WOX13(1) <---------ANAC58    ---------->DOF2  --   gaggaacacggctgctatagaagttgtagggttcttctatctatgcaatcagtcgatgaattttgcttagaaaatcaaacatcagaaagataaattgacc  11035700                --------->CCA1(2)               <---------ARR11(3)               --------->ARR11(3)            <--------P          ----------->GT1     --------->At4g35610  <------ZmHOX2a(2)           <---------At4g35610  ============================HOX2a_HOX2a ------->DEAR3(1)             --------->ZAT2                        ------->TEIL --->MYB46(3)<-------TEIL     <---------ZAT2             <---------ATHB12          --------->ICU4 ------->MYB46(3)      <------ZmHOX2a(1)               --------->WOX13(1) ---------->DOF2  --------->CCA1(2)   accgatcgagagaggtagatatagaggaacacagctgctaatcgtgttctatctatgcaatcagtcgatgaattttcaaagtaacatgatgagataagaa  11035800                                      <------MYB46(1)                                    <--------P                                   <---------ANAC58                                   <-------GAMYB                                                    -                                  --------->MYB52(2)                                                -                                  <---------MYB46(3)                                               <-                                  <------MYB83                                                     --                                  <------MYB46(1)                                                 ---                                  --------->MYB55(2)                                  <---------ARR14(2)                          --------->At4g35610                                         <---------ARR11(3)                       <---------ZAT2 <------MYB83                                    --------->ARR11(3)                       <---------At4g35610                                           *TSS         <--                 <---------ARR11(3)<---------ANAC46                                  <------ZmHOX2a(1)                 --------->ARR11(3)<---------ANAC58                                 ----------->GT1<-          --------->TOE1(3)      <---------AtMYB61                                 <---------TOE2(3)<          --------->TOE2(3)     <--------P                                        --------->YAB1  ---       <-----------GT1 --------->At4g35610    ------>ZmHOX2a(2)              <---------YAB1<---------AHL20(2)   <-----------ARR10  --------->MYB52(2)  ------>ZmHOX2a(2)          --------->TOE2(3)--------->ARR14(2)   ccgagaattttaccttagagatgttagctgcagagttggttggatcgatctcgatatcgtcgtctagggtttcttaattctgaatgaggatattatatcg  11035900        <-----------TBP   <------NtERF2  ------>NtERF2  --------->LBD16  <------NtERF2 --------->DEAR3(1) --------->RAP2.3(2) ----------->RAV1(1) -------->RAP2.3(1) -------->ATERF1(1) --------RAP2.3(1) ---->NtERF2 ------>ANAC46                                                       --------->ARR14(2)---------->ID1 -------DEAR3(1)                                                <---------ANAC46       <-----------GT1 --------ATERF1(1)                         <---------ZAT14 --------->ARR14(2)         <-----------GT1 ------NtERF2  <---------ZAT6              --------->ZAT14 ------->TEIL <---------ANAC58       <----- ------>DEAR3(1)--------->YAB1 <----------DOF2          <---------YAB1  <---------ANAC58  <----------DOF2   acgccgcagtatatatactgataatgggcttcgctttaatgggcctacagtgtttgtcatgaatcggcctgtattcgtgtgaaacatttttccttttctt  11036000                                                    <--------HAHB4                                                    --------->ATHB12                                                    <---------ICU4                                                   <---------ATHB12                                      --------->MYB52(1)                              --------->ARR14(2) <-----------GT1                              <---------ARR14(2) --------->WOX13(1)       <---------YAB1--------->WOX13(1)  ------->GAMYB       <---------AHL20(2) --------->At4g35610   --------->AHL20(2)                      <------------      <---------AHL20(2)  <---------LBD16----------->GT1    ------>ZmHOX2a(2)       <---------ICU4      --------->AHL20(2) --------->MYB52(1)     <---------AHL20(2)          --------->TOE2(3) -----DOF2           <---------------AGL15     --------->AHL20(2)----------->GT1 --------->YAB1   tttcaaattttaattgtgaatttcaattagcggaaacttataacggaaaattaatcatttgatcgtctggttaacaaaacttaacatcatgtccgaaatg  11036100                                                 --------->YAB1           --------->HSFB2a(1)                  <---------YAB1                      <---------AHL20(2)           --------->HSFC1(2)                <---------AHL20(2)            ---------->ID1           <---------HSFB2a(1)   <------ZmHOX2a(2)                       <---------ANAC58        ------->GAMYB <---------AHL20(2)    --------->AHL20(2)           <---------ANAC58       --------->ANAC46         <---------ARR11(3)<---------ARR11(3)    --------------->AtSPL8   <--- -----AGL1 <---------HSFC1(2)   --------->ARR11(3)--------->ARR11(3)   <-----------GT1---------->DOF2   gccaattcaacgaaatttcgccattttatcggaagatcaaactgaattttatgatatttcgaaagtttatatttttcgtcccatatttaaaagttagcgc  11036200                                                                     --------->ARR14(2)                                                       ------>ZmHOX2a(1)                                                 <---------HSFB2a(1) <---------ARR14(2)                                       --------->AHL20(2)            --------->ARR11(3)                           --------->YAB1        --------->HSFB2a(1)<---------KAN4(1)                          <---------ATHB12      <---------ARR11(3)  --------->KAN4(1)                        --------->WOX13(1)      --------->ARR11(3) ---------->TaMYB80       ---------   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------AHL20(2)          <---------KAN4(2)        <-------- -------DOF2     <------ZmHOX2a(1)    --------->AHL20(2)         <------ZmHOX2a(1)      <---------YAB1   tttaaaaactaaacaaataggaagttcaatcacaaaactatttaatttgaaatcttcctctaatataggaatatactgaaatatagttttatttttaatt  11036300                                                           <------MYB83 --------->ANAC58                                                           ----------->GT1            <----------DOF2                                                           <------MYB46(1)           <---------DAG2                                        <---------YAB1    --------->MYB59          <xxxxxxxxxxxxxxxxx                                       --------->AHL20(2) --------->MYB111(1)     --------->ARR11(3)                         <---------ANAC58              --------->ARR14(2)         <---------ARR11(3) >AHL20(2)               <---------ANAC58         --------->MYB52(1)    --------->ANAC58        <---- -AHL20(2)           <----------DOF2  --------->YAB1   <---------ARR14(2)  ---------->DOF2     xxxxxx   tttgtatttcatcaaatatcgctctttacttgtttttgaattataatcggcaaaacggatttggtagaatcaacaaggaaagaagacccttttgagcttg  11036400  Previous    Next  AGI:  At4g20480.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G06810.1); similar to Os07g0637200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001060400.1); similar to hypothetical protein OsI_026076 [Oryza sativa (indica cultivar-group)] (GB:EAZ04844.1); contains InterPro domain Protein of unknown function DUF537 (InterPro:IPR007491) Range:  from: 11034283    to: 11035885    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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