Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                             --------                                                                                             --------                                                                                         <---------AHL20(2)                                                                          <---------------AGL15                                                                          --------------->AGL15                                                                    --------->ARR14(2)   --------->AHL20(1)                                                                    <---------ARR11(1)   --------->AHL20(2)                                                                    --------->ARR11(3)  <---------AHL20(2)                                          <-----------GT1           <---------ARR11(3)  --------->AHL20(2)                                  --------->GLK1(2)                 <---------ARR14(2) *TSS <--------                  ------>ZmHOX2a(2)       --------->ZAT6           <---------CCA1(2)<---------AHL20(2)             <------ZmHOX2a(2)   <---------GLK1(2)    ---------->DOF2    <-----------------AGL3   ttagcaaacttggagatcgatcggcaatatagagagaatcgttttcactatctgatcaaaggaatttgcaaatcttctatttttagttaattttattatt  11016600   <------------CBF  -------->ATHB1  <---------ICU4               <---------AHL20(2)  --------->ATHB12          --------->YAB1         <-----------GT1  --------->ATHB51     --------->CCA1(2)    --------->AHL20(2) <---------YAB1       <---------ARR11(3)    <---------AHL20(2) --------->ICU4       --------->ARR14(2) --------->AHL20(2) <---------AHL20(2) --------->LBD16 --------->AHL20(2)                                      <-------- <---------ATHB51  --------->HSFB2a(2)   <---------AHL20(1)                         ------>MYB46(1) ------CBF         <---------HSFB2a(2)   --------->AHL20(1)                         ------>MYB83 ->ATHB12    <---------ARR11(3)--------->AHL20(2) <-----------GT1                 <---------MYB59 ->ATHB51 <----------DOF2  <---------AHL20(2)    <---------AHL20(2)          <---------MYB52(2) -YAB1    <---------DAG2  --------->AHL20(2)<---------AHL20(1)      <---------YAB1--------->AtMYB61 <   gaaattattggactttatcttccagatatataataaaatcaaatattttattttaactccttgaaacattcttattcaaacaaaccaaaccatacttttg  11016700                                                        <---------ICU4                                                       --------->ICU4                                                       <---------YAB1                                  --------------------->WRI1                          --------->GLK1(2)          --------->YAB1                       --------->ANAC46       <---------YAB1                            <---------AHL20(2)            <-----------GT1       <----------DOF2   <---------YAB1                      --------->AHL20(2) --DOF2   <-----------GT1<---------GLK1(2) --------->GLK1(2)                  <----------DOF2      -- ---------YAB1        --------->LBD16     <---------GLK1(2)       ---------->DOF2     <---------AHL20(2)   ttatgtttcaaattacaccatttccacgattctgttctttgtgagattctaattctcataatttagatgaaagttaacaactttctatataaaaatacaa  11016800                                   --------->ANAC46                            --------->MYB59                                   --------->ANAC58         <---------GLK1(2)  <---------TOE1(3)          --------->YAB1           --------->ANAC58       <---------YAB1       <---------TOE2(3)       --------->YAB1       <---------ICU4           --------->YAB1      --------->YAB1      <------- ------->TOE2(3)        <-------TEIL --------->WRKY18(1)--------->YAB1  <---------YAB1       --------   acgttatactaataagcatgttctggttcatcttcacaagtcaagctcatgacaataagcatgattctgaaactatgattttaggtaagaagtagaaatc  11016900                 <---------GLK1(2)                 <-----------GT1      ------->TEIL                            ----------->TBP                      --------->MYB46(3) --------->TOE2(3)         --------->ZAT6--------->ANAC46                        *TSS --GLK1(1)    <---------ALFIN1         <---------ALFIN1                  --------->YAB1 ->GLK1(1)  ------>ZmHOX2a(1)  ------------>CBF--------->AHL20(2)       <---------ATHB12 --------->ANAC46   caacgttgaatctcctacacattctccaaactctacaatctccactctataaattacaacaccatttgactccaaacatcatcgaacaaacaaacaactt  11017000                               --------->ANAC58                                                   ---                               --------->ANAC46                                                   <--                               --------->ANAC58                                                  ----                             --------->ZAT6                                                      <---                           <-----------GT1                                                      <----                 <---------CCA1(2)        <---------At4g35610                                   -----              <---------HSFC1(2) ----------------->AGL2                                       <------              --------->HSFC1(2) ----------------->AGL3                                      <-------     ---------->DOF2  ----------->GT1     --------->At4g35610                              <-------TEIL   caaaacaaaaagaagaaccatctcttgttaaacactccaaaatcagctacaatgtcaatttcaagagtttatctctgtctaatctttctcacattcgtca  11017100          --------->ZAT18          <---------ZAT14     --------->O2     <---------TGA1a                             ----------->RAV1(1)     --------->TGA1a                    ----------->RAV1(1)     <---------O2                     <---------ZAT2   <---------ALFIN1        --------->ANAC46      --------->RAP2.6(2) ------>ARR14(2)           --------->LBD16     <---------At4g35610 -------ARR14(2)           --------->ANAC58    --------->At4g35610                         --------->LBD16 ----->At4g35610        ------>NtERF2 --------->At4g35610                                  ------>NtERF2 ------At4g35610       --------->DEAR3(1)--------->At4g35610                              --------->ANAC46 -----DEAR3(2) --------->ZAT14        <---------At4g35610                                 <---------ETT(1) ---->MYB52(2) --------->At4g35610    --------->ZAT2                                --------->KAN4(2) ---MYB52(1)   <---------At4g35610--------->ANAC46                                <-------TEIL     <- ----HVH21--------->ZAT14  --------->ANAC58 --------->At4g35610        ---------->DOF2   <---------LBD16   gttccccacttgtgctctgctctcgcagcccgaaactcgcagcagcatcagcagcaatagggaagaagcatgggaaagaacatgttcattctccggcaat  11017200                         <-------TEIL                     <-------TEIL               --------->LBD16             --------->HSFB2a(2)             <---------HSFB2a(2)            <---------LBD16         <---------GLK1(1)            --------->ANAC46         --------->GLK1(1)--------->YAB1                       ---------->DOF2   <-----------GT1  <--------P        ----------->HVH21     ----------->RAV1(1)         <---------TOE1(3) ---------DOF2--------->LBD16     ------>ZmHOX2a(1)   ------->TEIL              <---------MYB52(1)   gcttttttctgaattcccgaaggttgattcatcatcctccatgacacatattgatgagcctgcaacaaagtctgcaatagccggttttttcaggtataga  11017300                                                                                                   --                                                                                                   <-                                                          ------->TEIL                          <----                                                          <---------ARR14(2)                    <----                                                          --------->ARR14(2)                    -----                                                      ------>MYB46(1)                           -----                                                      ------>MYB83                          <--------                                                    --------->TOE1(2)                       ---------                                      ----------------->AG--------->GLK1(2)                <---------LBD16                     --------->HSFB2a(2)         --------->REM1(1) <---------MYB52(1)     -----------                 <----------DOF2      ----------------->AGL1     <---------ANAC58         ===========       --------->LBD16               <-----------------AGL1      <---------ANAC58    --------->DEAR3(1)       <---------LBD16             <----------DOF2  --------->TOE2(2)  ------>ZmHOX2a(1)  ===========      <---------LBD16<---------HSFB2a(2)        <-------TEIL  ------>ZmHOX2a(1)   <---------ALFIN1<--   ctaccattccagggatggcctttccacaagtatgctcctttcccaatgggtacacctacgaatccttccgttcctgtaacttcaacaccgtcttctggag  11017400     --------->ZAT2     <---------At4g35610     --------->At4g35610     <---------ZAT2  <---------At4g35610  --------->At4g35610  <---------ZAT2 <-----------RAV1(1) ------->At4g35610 --------At4g35610 -----At4g35610 -----ZAT2                                  --------->ANAC58 ---->ZAT2                                  --------->ANAC58 ---->At4g35610                         ------>NtERF2                                 <---------ARR11(3) -HSFB2a(2)                            --------->ANAC46                 <---------ANAC58 >HSFB2a(2)<------ZmHOX2a(1)--------->HSFB2a(1)                         <---------ANAC55(2) >RAV1(2)<---------TOE2(3)  <---------HSFB2a(1)                         <---------ANAC58 ============RAV            --------->HSFC1(2) ---------->DOF2          --------->ANAC55(2)         < =========RAV              --------->DAG2   --------->AtLEC2      <------NtERF2 ------->TEIL     <--- ---------RAV1(1)<------ZmHOX2a(1) ----------->RAV1(2)       --------->ALFIN1--------->ICU4      ----   ctgctgctgctgaggaagaggaaaccgagaaggtgccttctgcgccaagcaaaggaaacagagatggaggcaatgcgtaatgaatcaatatgttttctac  11017500  Previous    Next  AGI:  At4g20410.1    Description:  GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN); transporter. Identical to Gamma-soluble NSF attachment protein (GSNAP) [Arabidopsis Thaliana] (GB:Q9SPE5;GB:Q9SUN8); similar to ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN), soluble NSF attachment protein [Arabidopsis thaliana] (TAIR:AT3G56190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46765.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain NSF attachment protein; (InterPro:IPR000744) Range:  from: 11013906    to: 11016587    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g20420.1    Description:  tapetum-specific protein-related. similar to tapetum-specific protein-related [Arabidopsis thaliana] (TAIR:AT5G44540.1); similar to putative tapetum-specific A3 [Brassica napus] (GB:ABA00707.1); contains InterPro domain Tapetum specific TAP35TAP44 (InterPro:IPR009891) Range:  from: 11016981    to: 11017634    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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