Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -     --------->YAB1                                      --------->AHL20(2)                         <   --------->ANAC58                       <---------ANAC46                                     <-----   --------->ANAC58                       <---------ANAC55(2)     --------->MYB52(1)          -------   --------->AtLEC2                <---------YAB1    ----------->GT1                       --------->YAB1  --------->WOX13(1)     <---------HSFB2a(2)       --------->CCA1(2)             --------->ATHB12 --- --->DAG2                --------->HSFB2a(2)      --------->ARR11(1)            <-------TEIL <------- --->DOF2  --------->AHL20(2)   --------->ICU4    <---------ARR11(3)      <----------DOF2 --------->ICU4   gtatcaagcaaaactaaataacatttgctagaaaattatgaattatgtgaaagatttgaaaaaatagataactgttctttgattcatttggaattataaa  10953200   --------->YAB1   <---------ICU4  <---------YAB1  --------->ICU4 -------->YAB1                                                                                     <- ---------ICU4                    --------->ANAC58     <---------YAB1                              <- ----AHL20(2)                     --------->ANAC58  <---------YAB1                              <---- -->YAB1                      --------->ANAC58   --------->TOE2(2)                      <---------ANAC58 ------>ARR11(3)              --------->ANAC58<-----------GT1   <---------ARR11(3)      <---------ANAC46 --YAB1   ---------->DOF2    --------->WOX13(1)>>>>>>>>>MYB98   --------->ARR11(3)      <---------ANAC58   aatcatgatgaccaaagaaaaatgttgaaatcactcaagcatttgatttaacatatgattatccaatatctatagaaatagttagcatttgagtgttttt  10953300                                 --------->AHL20(2)                         --------->YAB1                     -------->ATHB1   <-----------GT1   --------->ATHB12                                             --------->DOF5.7(2) --------DAG2        --------->YAB1      ---------->ID1                  ----------->GT1 ---------DOF2      <---------YAB1     <-----------RAV1(1) <-----------GT1        <---------MYB52(1) -------GT1    <-----------GT1   <---------AHL20(2)     --------->YAB1--------->MYB52(2) ----------->RAV1(1)   actttttagtatccaattcactatcattgatatttttaattttgttgtctagctcgatttataacatttggctagttgtaaatcgttatcccaacattgt  10953400                                                                                        ----------->GT1                                                                       --------->HSFB2a(2)                                                                       <---------HSFB2a(2)                                                                       --------->HSFC1(1)                                                                       <---------HSFC1(1)<<<<<<<<<<MYB80                                                                 --------->ALFIN1       <---------MYB46(3)                                                               <---------bZIP60(2)      <------MYB46(1)                              <---------MYB46(3)               <---------ANAC46        <---------AtMYB61                          --------->ATHB12                   --------->YAB1           <--------P                   --------->MYB59                          --------->ICU4           <-------GAMYB                   --------->MYB52(2)                       <---------ATHB12  <----------DOF2                 <---------MYB52(1)                   --------->ARR14(2)      <---------DAG2                ------------>MYB.PH3(2)               <---------ARR14(2)--------->ANAC46<------MYB83-   attccaaaaaaaaaaaccagttagttattcagtggttttgaactgagcccagcccaaatccaatgatgtggttctcgaaactttttgggttggtttaaca  10953500             <----------DOF2            ------>ZmHOX2a(2)           <------ZmHOX2a(2)           <---------RVE1(1)          <---------ARR11(3)          --------->ARR14(2)          --------->AGP1          <---------ARR14(2)          --------->ARR11(3)        <---------WOX13(1)    ------->GAMYB          <---------AGP1           <------------CBF      *TSS          <-----------ARR10    <------------CBF        <-----------GT1        ---------->DOF2         <---------CCA1(2)  ------------>CBF     ------>MYB83           ------>ZmHOX2a(1)      <-------TEIL       --------->MYB46(3)      ------>MYB46(1) <---------ZAT14     <-----------HVH21   ------>ZmHOX2a(2)    --------->DEAR3(2) --------->ZAT14 -------->MYB52(1)<----------DOF2 --------->ATHB12  --------->YAB1<---------ALFIN1   aaaaccggttcagatcttttcttttgatccaccaattgattggactaaaccgacttataacagtcgctacactcctatagaaaagcttgaaattgaacac  10953600                                                                     <---------ANAC58                                   <---------At4g35610               <---------ANAC46                     --------->HSFB2a(2)                             <---------ANAC58                     <---------HSFB2a(2)                            <-------TEIL                   ----------->RAV1(2)      <---------MYB46(3)     --------->GLK1(2)                 --------->ANAC46  <---------ZAT2                 <---------GLK1(2)             ------>ZmHOX2a(1)     --------->At4g35610       <---------HSFB2a(2)          <-----------GT1          --------->ZAT2        ------->GAMYB         <-----------GT1           <---------GLK1(1)  --------->MYB52(1)                 ------>ZmHOX2a(2)      ------->TEIL------>NtERF2    --------->GLK1(1) --------->MYB46(3)  <---------CCA1(2)       <---   agtcgatgaattttcctctccgcctggaagattgtggagctcccagttgttgttaacaacggtctagagattcgtgtctcttgaaattcgatctgagttt  10953700                                                                   <---------ANAC55(2)                     <---------ANAC55(2)                           --------->ANAC55(2)                    ------>ZmHOX2a(2)                            --------->YAB1                 <----                 --------->YAB1                            ------>ZmHOX2a(2)                    =====                <---------ATHB12                          <------ZmHOX2a(2)        --------->MYB59         <-------TEIL--------->ANAC55(2)      --------->TOE1(3) <---------ATHB12   <---------TOE1(3)     <---------TOE2(3)           <---------ANAC58        --------->ARR11(3)   <---------ANAC46  =====     <---------TOE1(3)--------->LBD16         --------->TOE2(3) <---------ATHB51   <---------TOE2(3) --------GT1 <<<<<<<<<WRKY18     <---------ANAC58        <---------ARR11(3)  ---------->ID1  --------   caccttcaaggttcgtcaatgatccgtagcaatttgcttcgttctaaaccctaatttgagatctcaattatgtgattttttcgtttaggttttaatcagg  10953800                                                                                      <------ZmHOX2a(1)                                                                                    --------->ALFIN1                                                                 <-----------GT1 --------->ALFIN1                                                                --------->MYB46(3) <------ZmHOX2a(1)                                                              --------->ARR14(2)<------ZmHOX2a(1)                         <---------At4g35610                --------->LBD16   --------->ALFIN1                   <---------MYB52(1)                     <------NtERF2      <------NtERF2                ============================HOX2a_HOX2a   <---------LBD16    --------->ATERF1(1)                ------>ZmHOX2a(2)                        ------>NtERF2      --------->LBD16               <------ZmHOX2a(2)                         --------->MYB52(1)<---------ANAC46               =============================HOX2a_HOX2a --------->DEAR3(1) <---------DEAR3(1)              --------->ARR14(2)                     --------->ANAC58     <---------LBD16           -              <---------ARR14(2)                  <---------ARR14(2)      <------NtERF2      <------- --ZmHOX2a(1) --------->GLK1(2)                   --------->ARR14(2)    --------->WRKY12     <------- ======================HOX2a_HOX2a               <------ZmHOX2a(1)     <---------MYB52(1) --------->ALFIN1 =====================HOX2a_HOX2a    <------ZmHOX2a(1)  <---------ALFIN1<---------DEAR3(1)----------- ->YAB1      <------ZmHOX2a(1)     <---------TOE2(3) --------->ANAC58 <-----------HVH21--------->ALFIN1   aatgaagcattcaaaggatccgtttgaagcagcgattgaggaagagcaagaggaatcgccaccggaatcacccgttggcggaggaggaggaggtgatggt  10953900                                                                    --------->At4g35610                                                                    <---------At4g35610                                                                   <---------TOE2(1)                                                                   <---------TOE1(1)                                                                  --------->SPL7                                                                ------>NtERF2      <---------SPL7                                            <---------SPL7----------->GT1 -------->ZAT14                                                 --------->ORA47(1) --YAB1                                                         <-----------HVH21           <-------- --AtMYB61                                                     --------->DEAR3(1)        <-----------RAV1(1) >HVH21                                                  --------->KAN4(2) ---------->DOF2<-------GAMYB   agtgaagacggacgaattgaaatcgaccagactcaagatgaagatgagagacctgtggatgttcgccgtccgatgaagaaagctaaaacctctgttgttg  10954000                                                                <---------At4g35610                      --------->ICU4                     ------->TEIL                    ---------->DOF2                <---------ARR14(2)                         ------>ZmHOX2a(1)                  --------->ARR11(3)               --------->GLK1(2)      --------->CCA1(1)  --------     <---------At4g35610                           --------->ARR14(2)     --------->RVE1(1) ------>ZmHOX2a(2) -MYB46(3)       --------->YAB1             <------ZmHOX2a(1)   --------->At4g35610  <---------AGP1   ttactgaagctaagaacaaagataaagatgaagatgatgaagaagaggaagagaatatggatgttgagcttactaaatatccaactagttctgatcctgc  10954100  Previous    Next  AGI:  At4g20280.1    Description:  TAF11 (TBP-ASSOCIATED FACTOR 11); transcription initiation factor. similar to TAF11b (TBP-ASSOCIATED FACTOR 11b), transcription initiation factor [Arabidopsis thaliana] (TAIR:AT1G20000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63567.1); contains InterPro domain TAFII28-like protein; (InterPro:IPR006809); contains InterPro domain Histone-fold; (InterPro:IPR009072) Range:  from: 10953557    to: 10954984    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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